Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G027100 Populus trichocarpa HOM05D007200 ORTHO05D009030 4.4e-124 448.0 226 100.0
Sabra05G0032400 Salix brachista HOM05D007200 ORTHO05D009030 2.4e-114 415.6 222 94.6
Manes.08G119500 Manihot esculenta HOM05D007200 ORTHO05D009030 3.1e-93 345.5 224 81.2
Ciclev10002020m.g Citrus clementina HOM05D007200 ORTHO05D009030 7.6e-92 340.9 236 76.7
TWI12G0470 Tripterygium wilfordii HOM05D007200 ORTHO05D009030 1.3e-88 330.1 227 76.2
QL03p012758 Quercus lobata HOM05D007200 ORTHO05D009030 1.1e-87 327.0 227 75.8
Atru.chr12.1493 Acer truncatum HOM05D007200 ORTHO05D009030 1.6e-86 323.2 225 76.0
Duzib177G0869 Durio zibethinus HOM05D007200 ORTHO05D009030 6.2e-86 321.2 226 76.1
TAR365G0308 Trochodendron aralioides HOM05D007200 ORTHO05D009030 1.1e-85 320.5 228 71.9
TAR365G0906 Trochodendron aralioides HOM05D007200 ORTHO05D009030 5.2e-85 318.2 228 71.5
Haze_04164 Corylus avellana HOM05D007200 ORTHO05D009030 6.8e-85 317.8 217 75.6
Thecc.05G310900 Theobroma cacao HOM05D007200 ORTHO05D009030 6.8e-85 317.8 230 74.3
Cfa006611 Carpinus fangiana HOM05D007200 ORTHO05D009030 3.4e-84 315.5 217 74.2
Gohir.A11G266300 Gossypium hirsutum HOM05D007200 ORTHO05D009030 5.8e-84 314.7 221 74.7
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 9.9e-84 313.9 230 74.3
Gorai.007G298700 Gossypium raimondii HOM05D007200 ORTHO05D009030 1.3e-83 313.5 221 74.2
Gohir.D11G276600 Gossypium hirsutum HOM05D007200 ORTHO05D009030 1.7e-83 313.2 221 74.2
RcHm_v2.0_Chr3g0455321 Rosa chinensis HOM05D007200 ORTHO05D009030 2.2e-83 312.8 230 73.5
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 3.8e-83 312.0 230 73.9
FAN09G0829 Fragaria x ananassa HOM05D007200 ORTHO05D009030 1.1e-82 310.5 227 74.0
Glyma.10G153100 Glycine max HOM05D007200 ORTHO05D009030 2.4e-82 309.3 224 74.6
CANSAT54G2021 Cannabis sativa HOM05D007200 ORTHO05D009030 4.6e-81 305.1 227 71.4
GSVIVG01031113001 Vitis vinifera HOM05D007200 ORTHO05D009030 4.6e-81 305.1 209 77.0
AUR62000793 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.7e-80 303.1 227 71.8
MD12G1216700 Malus domestica HOM05D007200 ORTHO05D009030 3.9e-80 302.0 233 70.4
AUR62005175 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.5e-79 300.1 226 70.4
Nn3g21404 Nelumbo nucifera HOM05D007200 ORTHO05D009030 1.5e-79 300.1 233 67.8
Lj9C128T5 Lonicera japonica HOM05D007200 ORTHO05D009030 7.3e-79 297.7 205 75.1
Actinidia24645 Actinidia chinensis HOM05D007200 ORTHO05D009030 3.6e-78 295.4 225 70.7
THA.LOC104818708 Tarenaya hassleriana HOM05D007200 ORTHO05D009030 3.6e-78 295.4 212 74.1
Phvul.007G196200 Phaseolus vulgaris HOM05D007200 ORTHO05D009030 6.9e-77 291.2 207 74.4
CARHR079750 Cardamine hirsuta HOM05D007200 ORTHO05D009030 1.2e-76 290.4 223 69.5
Cpa.g.sc48.76 Carica papaya HOM05D007200 ORTHO05D009030 1.5e-76 290.0 225 67.6
CsaV3_2G006520 Cucumis sativus L. HOM05D007200 ORTHO05D009030 1.5e-76 290.0 208 71.6
Sp3g04270 Schrenkiella parvula HOM05D007200 ORTHO05D009030 1.5e-76 290.0 218 71.1
AL3G15960 Arabidopsis lyrata HOM05D007200 ORTHO05D009030 2.0e-76 289.7 206 73.3
COL.COLO4_10491 Corchorus olitorius HOM05D007200 ORTHO05D009030 2.0e-76 289.7 190 78.4
Thhalv10021289m.g Eutrema salsugineum HOM05D007200 ORTHO05D009030 2.0e-76 289.7 216 71.3
MBI19_g12813_MAGBIO Magnolia biondii HOM05D007200 ORTHO05D009030 2.6e-76 289.3 214 70.6
VMungo0720G1786 Vigna mungo HOM05D007200 ORTHO05D009030 2.6e-76 289.3 187 79.7
CiPaw.07G020000 Carya illinoinensis HOM05D007200 ORTHO05D009030 4.4e-76 288.5 209 73.7
PGR083G0889 Punica granatum HOM05D007200 ORTHO05D009030 4.4e-76 288.5 219 68.9
Eucgr.B01933 Eucalyptus grandis HOM05D007200 ORTHO05D009030 5.8e-76 288.1 228 66.7
BcaC05g30148 Brassica carinata HOM05D007200 ORTHO05D009030 7.6e-76 287.7 223 68.6
Rhsim05G0141700 Rhododendron simsii HOM05D007200 ORTHO05D009030 1.3e-75 287.0 206 75.7
Aqoxy5G00700 Aquilegia oxysepala HOM05D007200 ORTHO05D009030 1.7e-75 286.6 227 67.0
MELO3C004233.2 Cucumis melo HOM05D007200 ORTHO05D009030 2.2e-75 286.2 211 69.7
Carub.0003s0469 Capsella rubella HOM05D007200 ORTHO05D009030 3.8e-75 285.4 227 67.4
Sed0020284 Sechium edule HOM05D007200 ORTHO05D009030 4.9e-75 285.0 190 74.7
AT3G05410 Arabidopsis thaliana HOM05D007200 ORTHO05D009030 8.4e-75 284.3 206 71.8
Lj9C124T9 Lonicera japonica HOM05D007200 ORTHO05D009030 1.1e-74 283.9 229 66.8
Aa31LG5G15970 Aethionema arabicum HOM05D007200 ORTHO05D009030 1.9e-74 283.1 217 68.7
BcaC05g30124 Brassica carinata HOM05D007200 ORTHO05D009030 2.4e-74 282.7 223 66.4
BolC5t34842H Brassica oleracea HOM05D007200 ORTHO05D000438 2.4e-74 282.7 223 66.8
BraA05t23030Z Brassica rapa HOM05D007200 ORTHO05D009030 2.4e-74 282.7 223 66.8
CSS0011307 Camellia sinensis var. sinensis HOM05D007200 ORTHO05D009030 4.2e-74 282.0 230 67.4
DCAR_001939 Daucus carota HOM05D007200 ORTHO05D009030 1.2e-73 280.4 227 64.8
Nitab4.5_0002420g0030 Nicotiana tabacum HOM05D007200 ORTHO05D009030 1.2e-73 280.4 224 64.3
Prupe.6G323000 Prunus persica HOM05D007200 ORTHO05D009030 1.2e-73 280.4 226 68.6
Lalb_Chr21g0310651 Lupinus albus HOM05D007200 ORTHO05D009030 2.7e-73 279.3 215 67.4
Lsat_1_v5_gn_9_87521 Lactuca sativa HOM05D007200 ORTHO05D009030 4.6e-73 278.5 214 69.2
HanXRQChr11g0339441 Helianthus annuus HOM05D007200 ORTHO05D009030 1.1e-71 273.9 224 67.0
Peaxi162Scf00071g00636 Petunia axillaris HOM05D007200 ORTHO05D009030 1.1e-71 273.9 226 65.9
EL10Ac4g09392 Beta vulgaris HOM05D007200 ORTHO05D009030 2.8e-70 269.2 226 65.9
ECA236G3394 Erigeron canadensis HOM05D007200 ORTHO05D009030 3.6e-70 268.9 225 66.2
Lj5g0005198 Lotus japonicus HOM05D007200 ORTHO05D009030 8.1e-70 267.7 224 67.4
Medtr1g083110 Medicago truncatula HOM05D007200 ORTHO05D009030 5.3e-69 265.0 210 69.5
PGSC0003DMG400007427 Solanum tuberosum HOM05D007200 ORTHO05D009030 2.0e-68 263.1 212 65.6
FAN02G4393 Fragaria x ananassa HOM05D007200 ORTHO05D009030 4.5e-68 261.9 226 65.5
Solyc11g008480.2 Solanum lycopersicum HOM05D007200 ORTHO05D009030 5.8e-68 261.5 210 64.8
CAN.G321.37 Capsicum annuum HOM05D007200 ORTHO05D009030 7.6e-68 261.2 208 64.9
Psat6g149880 Pisum sativum HOM05D007200 ORTHO05D009030 7.6e-68 261.2 221 66.1
Ah.04g160430 Amaranthus hybridus HOM05D007200 ORTHO05D009030 1.3e-67 260.4 211 67.3
PSO210G0998 Papaver somniferum HOM05D007200 ORTHO05D009030 8.4e-67 257.7 224 61.6
Cc02_g31060 Coffea canephora HOM05D007200 ORTHO05D009030 1.4e-66 256.9 217 66.8
Migut.N01991 Erythranthe guttata HOM05D007200 ORTHO05D009030 1.4e-66 256.9 224 62.5
Migut.O00553 Erythranthe guttata HOM05D007200 ORTHO05D009030 2.4e-66 256.1 224 62.9
Sopen11g004260 Solanum pennellii HOM05D007200 ORTHO05D009030 4.2e-66 255.4 186 69.4
TPR.G6036 Trifolium pratense HOM05D007200 ORTHO05D009030 7.1e-66 254.6 186 72.0
arahy.Tifrunner.gnm1.ann1.PH9A9F Arachis hypogaea HOM05D007200 ORTHO05D009030 9.3e-66 254.2 187 74.3
arahy.Tifrunner.gnm1.ann1.H2XQXC Arachis hypogaea HOM05D007200 ORTHO05D009030 6.0e-65 251.5 187 73.8
Hund07085 Selenicereus undatus HOM05D007200 ORTHO05D009030 1.0e-64 250.8 185 67.6
Nitab4.5_0009303g0010 Nicotiana tabacum HOM05D007200 ORTHO05D009030 5.1e-64 248.4 211 64.0
Zm00001eb142170 Zea mays HOM05D007200 ORTHO05D009030 1.5e-63 246.9 187 64.2
ATR0706G032 Amborella trichopoda HOM05D007200 ORTHO05D009030 2.5e-63 246.1 189 64.6
PSO832G2855 Papaver somniferum HOM05D007200 ORTHO05D009030 9.6e-63 244.2 224 60.3
FAN05G3823 Fragaria x ananassa HOM05D000179 ORTHO05D009030 1.3e-62 243.8 158 82.3
SGA_v2.0_scaffold98G29315 Striga asiatica HOM05D007200 ORTHO05D009030 2.1e-62 243.0 208 63.9
ClCG02G015570 Citrullus lanatus HOM05D007200 ORTHO05D009030 4.8e-62 241.9 225 59.6
MSTRG.27987 Avicennia marina HOM05D007200 ORTHO05D009030 1.4e-61 240.4 222 59.0
BcaC05g30126 Brassica carinata HOM05D007200 ORTHO05D009030 1.5e-60 236.9 223 59.2
CDE02G3507 Ceratophyllum demersum HOM05D007200 ORTHO05D009030 1.0e-59 234.2 232 55.6
vmacro19623 Vaccinium macrocarpon HOM05D007200 ORTHO05D009030 2.9e-59 232.6 206 65.5
Sc16g0008540 Simmondsia chinensis HOM05D007200 ORTHO05D009030 1.4e-58 230.3 190 63.7
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 6.0e-57 224.9 226 55.3
AUR62004827 Chenopodium quinoa HOM05D007200 ORTHO05D009030 5.1e-56 221.9 184 64.1
CANSAT54G2778 Cannabis sativa HOM05D007200 ORTHO05D009030 1.3e-54 217.2 156 72.4
HPP92_006928 Vanilla planifolia HOM05D000065 ORTHO05D001606 4.8e-54 215.3 188 59.0
SGA_v2.0_scaffold95G28806 Striga asiatica HOM05D007200 ORTHO05D009030 7.9e-49 198.0 166 65.7
AagrBONN_evm.TU.Sc2ySwM_228.2760 Anthoceros agrestis HOM05D007200 ORTHO05D009030 1.2e-41 174.1 178 50.0
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 1.4e-40 170.6 161 49.7
Pp3c2_22000 Physcomitrium patens HOM05D007200 ORTHO05D009030 1.1e-39 167.5 181 47.5
SMO140G0101 Selaginella moellendorffii HOM05D007200 ORTHO05D009030 3.3e-39 166.0 180 47.8
CBR_g32304 Chara braunii HOM05D007200 ORTHO05D009030 7.7e-36 154.8 151 50.3
Os01g0934400 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 1.3e-35 154.1 115 67.0
C05p61820 Brassica napus HOM05D000205 ORTHO05D000438 4.1e-29 132.5 163 50.3
PRCOL_00003141 Prasinoderma coloniale HOM05D007200 ORTHO05D009030 5.3e-29 132.1 137 50.4
Cre09.g389578 Chlamydomonas reinhardtii HOM05D007200 ORTHO05D009030 1.9e-26 123.6 223 35.9
MD04G1202900 Malus domestica HOM05D007200 ORTHO05D009030 7.2e-26 121.7 120 61.7
MCO07G015 Micromonas commoda HOM05D007200 ORTHO05D009030 1.1e-23 114.4 160 39.4
Os01g0934350 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 5.0e-19 99.0 71 60.6
Actinidia19786 Actinidia chinensis HOM05D007200 ORTHO05D009030 7.2e-18 95.1 75 65.3
Oeu012109.1 Olea europaea HOM05D007200 ORTHO05D009030 2.6e-07 60.1 41 80.5


User provided reference genes

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