Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 6.5e-218 760.4 368 100.0
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.2e-211 739.6 368 96.7
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 2.7e-195 685.3 360 90.8
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 8.8e-191 670.2 361 86.1
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 8.8e-191 670.2 360 87.8
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 8.8e-191 670.2 357 86.6
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 2.0e-190 669.1 357 87.4
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 5.7e-190 667.5 358 88.0
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 7.5e-190 667.2 360 86.7
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 9.8e-190 666.8 360 87.8
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.7e-189 666.0 358 87.4
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 2.8e-189 665.2 361 86.1
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 3.7e-189 664.8 358 86.9
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.9e-189 664.5 358 87.4
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 8.3e-189 663.7 357 88.5
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 8.3e-189 663.7 357 88.5
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 1.1e-188 663.3 358 87.2
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.1e-188 661.4 360 86.4
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 5.4e-188 661.0 359 86.1
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 7.0e-188 660.6 360 85.3
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 1.6e-187 659.4 361 86.7
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 4.5e-187 657.9 359 87.2
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 5.9e-187 657.5 356 86.8
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.0e-186 656.8 359 85.0
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.3e-186 656.4 364 83.8
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 1.3e-186 656.4 356 87.4
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.3e-186 656.4 359 86.1
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.7e-186 656.0 364 84.1
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 1.7e-186 656.0 357 85.4
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 1.7e-186 656.0 356 87.4
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.8e-186 654.8 359 85.0
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 8.6e-186 653.7 365 84.4
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.6e-186 653.7 361 83.9
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.1e-185 653.3 359 84.4
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 2.5e-185 652.1 360 85.3
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 2.5e-185 652.1 360 85.3
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 3.3e-185 651.7 363 82.9
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 3.3e-185 651.7 361 86.4
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 4.3e-185 651.4 356 86.8
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 4.3e-185 651.4 357 86.6
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 5.6e-185 651.0 363 84.6
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 9.5e-185 650.2 360 85.8
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.1e-184 649.0 360 83.6
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 2.8e-184 648.7 354 86.4
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 2.8e-184 648.7 356 85.4
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 4.7e-184 647.9 371 82.5
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 4.7e-184 647.9 360 84.7
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 6.1e-184 647.5 363 84.6
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 8.0e-184 647.1 364 83.2
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 8.0e-184 647.1 355 85.6
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 1.8e-183 646.0 358 85.5
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 5.2e-183 644.4 365 83.3
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 5.2e-183 644.4 359 83.6
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.9e-183 643.7 355 85.1
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 2.6e-182 642.1 355 84.2
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 7.5e-182 640.6 381 80.8
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 9.8e-182 640.2 358 85.2
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 1.3e-181 639.8 362 83.1
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.7e-181 639.4 366 80.3
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 2.2e-181 639.0 361 83.7
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 2.9e-181 638.6 376 81.1
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 4.9e-181 637.9 357 83.5
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 1.8e-180 636.0 365 81.6
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 3.2e-180 635.2 357 82.6
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 5.4e-180 634.4 354 84.7
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.4e-180 634.4 357 82.6
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 9.2e-180 633.6 370 80.8
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 2.0e-179 632.5 370 81.9
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 2.0e-179 632.5 355 83.4
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 3.5e-179 631.7 360 81.9
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 4.6e-179 631.3 379 80.7
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 4.6e-179 631.3 370 80.8
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.3e-178 629.8 354 83.6
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.7e-178 629.4 361 81.7
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.7e-178 629.4 361 82.5
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.0e-178 628.6 357 81.2
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 3.0e-178 628.6 377 78.2
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 6.6e-178 627.5 361 81.4
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.6e-178 627.1 357 81.8
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 1.5e-177 626.3 363 82.6
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.5e-177 626.3 360 80.8
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 2.5e-177 625.5 354 83.3
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 4.3e-177 624.8 359 82.5
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 4.3e-177 624.8 355 82.8
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 4.7e-176 621.3 356 80.6
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 4.7e-176 621.3 361 80.3
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.1e-175 620.2 357 80.7
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.0e-175 618.2 360 79.7
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 4.0e-175 618.2 358 82.1
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 8.9e-175 617.1 381 78.0
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 1.2e-174 616.7 356 81.2
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.5e-174 616.3 370 80.3
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 2.0e-174 615.9 363 78.0
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 2.2e-173 612.5 356 82.9
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.9e-173 612.1 368 80.2
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.4e-172 609.8 347 82.4
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.2e-171 606.7 368 78.3
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 8.6e-170 600.5 358 79.6
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 8.6e-170 600.5 371 76.8
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 1.9e-169 599.4 377 76.1
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.9e-169 599.4 371 76.8
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 9.5e-169 597.0 353 80.7
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-168 596.3 367 76.8
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 6.8e-167 590.9 357 79.0
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 1.2e-166 590.1 357 80.4
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 4.4e-166 588.2 348 79.9
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 2.2e-165 585.9 359 76.9
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 1.4e-164 583.2 363 76.0
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 1.7e-162 576.2 351 75.2
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 7.3e-161 570.9 357 76.8
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 9.5e-161 570.5 347 77.8
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.7e-160 568.2 363 74.4
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.7e-160 568.2 351 75.8
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.1e-159 567.0 352 76.4
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.6e-155 553.1 431 65.7
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 3.5e-155 552.0 299 85.6
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 4.6e-155 551.6 358 70.9
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.0e-154 550.4 353 72.0
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.9e-154 548.5 356 73.9
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.9e-154 548.5 356 73.3
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 8.7e-154 547.4 356 74.7
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.5e-153 545.8 331 74.9
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 4.3e-153 545.0 369 71.8
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 6.2e-152 541.2 288 88.5
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.2e-150 537.0 365 71.8
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 2.0e-150 536.2 344 71.8
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.2e-147 526.9 359 72.4
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.8e-144 515.8 367 67.0
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.7e-138 494.6 290 80.0
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 8.4e-133 477.6 329 67.8
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.9e-132 476.5 331 65.6
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 3.5e-131 472.2 718 40.8
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.3e-130 470.3 358 64.2
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 2.5e-129 466.1 240 90.0
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.4e-125 451.1 310 67.1
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 2.5e-124 449.5 330 61.2
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 2.6e-118 429.5 267 75.3
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 6.9e-111 404.8 239 78.2
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 9.1e-111 404.4 365 54.5
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 2.6e-105 386.3 334 59.9
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.5e-100 369.8 331 57.7
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 2.3e-98 363.2 219 77.6
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 2.2e-96 356.7 251 65.3
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.2e-83 314.3 202 74.3
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 8.0e-83 311.6 289 57.8
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 4.1e-55 219.5 143 76.9
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 1.6e-46 191.0 131 73.3
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 2.1e-46 190.7 100 91.0
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 3.5e-46 189.9 131 73.3
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 4.6e-46 189.5 123 77.2
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.0e-45 186.8 121 77.7
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.5e-44 183.7 114 76.3
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 7.3e-44 182.2 168 54.8
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.6e-43 181.0 130 70.0
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.0e-42 176.4 98 87.8
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 2.9e-40 170.2 126 68.3
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.6e-37 159.1 98 73.5
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 7.6e-33 145.6 111 64.9
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 1.9e-31 141.0 126 57.1
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 1.3e-24 118.2 69 81.2
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 2.2e-24 117.5 77 72.7
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 5.4e-23 112.8 67 77.6
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 2.1e-22 110.9 64 82.8
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.3e-19 101.7 61 80.3
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.4e-18 98.2 65 67.7
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 1.5e-17 94.7 84 57.1
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 8.4e-16 89.0 128 43.8
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.3e-13 80.9 51 70.6
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 3.3e-12 77.0 62 61.3
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 7.6e-09 65.9 41 75.6
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 9.3e-07 58.9 31 90.3


User provided reference genes

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