Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G029500 Populus trichocarpa HOM05D002407 ORTHO05D002476 5.9e-114 414.5 246 100.0
Potri.008G151200 Populus trichocarpa HOM05D002407 ORTHO05D002476 3.5e-58 229.2 230 70.9
Potri.010G089700 Populus trichocarpa HOM05D002407 ORTHO05D002476 3.6e-55 219.2 218 70.6
Sabra08G0115000 Salix brachista HOM05D002407 ORTHO05D002476 2.4e-51 206.5 228 67.1
Sabra10G0053600 Salix brachista HOM05D002407 ORTHO05D002476 1.7e-49 200.3 215 57.2
Manes.15G027400 Manihot esculenta HOM05D002407 ORTHO05D002476 8.3e-44 181.4 231 55.8
Manes.15G026500 Manihot esculenta HOM05D002407 ORTHO05D002476 3.5e-42 176.0 230 57.8
Thecc.04G228600 Theobroma cacao HOM05D002407 ORTHO05D002476 7.3e-40 168.3 232 54.7
CiPaw.01G164400 Carya illinoinensis HOM05D002407 ORTHO05D002476 2.1e-39 166.8 210 54.3
MD16G1191200 Malus domestica HOM05D002407 ORTHO05D002476 5.2e-38 162.2 232 48.7
Ciclev10004136m.g Citrus clementina HOM05D002407 ORTHO05D002476 6.8e-38 161.8 221 47.5
Duzib151G0448 Durio zibethinus HOM05D002407 ORTHO05D002476 5.8e-37 158.7 216 49.5
Prupe.1G011200 Prunus persica HOM05D002407 ORTHO05D002476 1.7e-36 157.1 226 48.2
Gorai.011G169000 Gossypium raimondii HOM05D002407 ORTHO05D002476 2.2e-36 156.8 216 50.5
Atru.chr4.2501 Acer truncatum HOM05D002407 ORTHO05D002476 1.9e-35 153.7 206 49.5
Haze_00920 Corylus avellana HOM05D002407 ORTHO05D002476 1.9e-35 153.7 214 46.7
MD13G1190800 Malus domestica HOM05D002407 ORTHO05D002476 2.4e-35 153.3 224 48.2
CiPaw.02G096000 Carya illinoinensis HOM05D002407 ORTHO05D002476 3.9e-33 146.0 229 45.9
Dinv44512 Davidia involucrata HOM05D002407 ORTHO05D002476 6.6e-33 145.2 219 55.7
TWI09G0219 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 1.1e-32 144.4 209 43.1
TWI73G0052 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 4.3e-32 142.5 210 42.9
Gohir.D10G151700 Gossypium hirsutum HOM05D002407 ORTHO05D002476 5.6e-32 142.1 216 47.7
Duzib212G0865 Durio zibethinus HOM05D002407 ORTHO05D002476 3.6e-31 139.4 241 48.5
QL06p003139 Quercus lobata HOM05D002407 ORTHO05D002476 5.2e-30 135.6 221 49.3
Eucgr.H03537 Eucalyptus grandis HOM05D002407 ORTHO05D002476 3.4e-29 132.9 229 45.9
Dinv38434 Davidia involucrata HOM05D002407 ORTHO05D002476 4.4e-29 132.5 213 42.7
Duzib052G1002 Durio zibethinus HOM05D002407 ORTHO05D002476 7.6e-29 131.7 223 46.6
FvH4_4g15230 Fragaria vesca HOM05D002407 ORTHO05D002476 7.6e-29 131.7 225 51.1
Gohir.D09G217200 Gossypium hirsutum HOM05D002407 ORTHO05D002476 7.6e-29 131.7 226 43.4
RcHm_v2.0_Chr4g0416621 Rosa chinensis HOM05D002407 ORTHO05D002476 9.9e-29 131.3 230 51.7
Cpa.g.sc58.130 Carica papaya HOM05D002407 ORTHO05D002476 1.7e-28 130.6 216 55.6
FAN07G2387 Fragaria x ananassa HOM05D002407 ORTHO05D002476 1.7e-28 130.6 229 50.7
Gorai.006G237700 Gossypium raimondii HOM05D002407 ORTHO05D002476 1.7e-28 130.6 226 42.9
FAN12G3852 Fragaria x ananassa HOM05D002407 ORTHO05D002476 2.2e-28 130.2 225 51.1
FAN22G1385 Fragaria x ananassa HOM05D002407 ORTHO05D002476 2.9e-28 129.8 229 51.1
Gohir.A10G117100 Gossypium hirsutum HOM05D002407 ORTHO05D002476 6.4e-28 128.6 229 48.5
TWI53G2093 Tripterygium wilfordii HOM05D002407 ORTHO05D002476 6.4e-28 128.6 208 41.3
FAN17G1063 Fragaria x ananassa HOM05D002407 ORTHO05D002476 1.1e-27 127.9 229 50.7
Gohir.A09G214700 Gossypium hirsutum HOM05D002407 ORTHO05D002476 3.2e-27 126.3 226 42.0
Medtr1g104710 Medicago truncatula HOM05D002407 ORTHO05D002476 1.2e-26 124.4 216 46.3
arahy.Tifrunner.gnm1.ann1.GGU5D9 Arachis hypogaea HOM05D002407 ORTHO05D002476 2.7e-26 123.2 229 47.2
arahy.Tifrunner.gnm1.ann1.C339P9 Arachis hypogaea HOM05D002407 ORTHO05D002476 4.6e-26 122.5 229 46.7
COL.COLO4_10231 Corchorus olitorius HOM05D002407 ORTHO05D002476 6.0e-26 122.1 228 43.9
Actinidia23483 Actinidia chinensis HOM05D002407 ORTHO05D002476 1.0e-25 121.3 219 49.3
CsaV3_6G038190 Cucumis sativus L. HOM05D002407 ORTHO05D002476 3.0e-25 119.8 206 52.4
Lalb_Chr05g0210931 Lupinus albus HOM05D002407 ORTHO05D002476 3.0e-25 119.8 218 41.3
Psat6g208200 Pisum sativum HOM05D002407 ORTHO05D002476 5.1e-25 119.0 225 47.6
Ca_10916_v3 Cicer arietinum L. HOM05D002407 ORTHO05D002476 1.9e-24 117.1 223 47.1
VMungo0720G1158 Vigna mungo HOM05D002407 ORTHO05D002476 4.3e-24 115.9 216 45.8
MSTRG.21848 Avicennia marina HOM05D002407 ORTHO05D002476 5.6e-24 115.5 216 37.0
Sopen09g030650 Solanum pennellii HOM05D002407 ORTHO05D002476 7.3e-24 115.2 214 48.6
Cc03_g03560 Coffea canephora HOM05D002407 ORTHO05D002476 9.6e-24 114.8 221 38.5
Lalb_Chr09g0319791 Lupinus albus HOM05D002407 ORTHO05D002476 9.6e-24 114.8 221 50.7
MELO3C014484.2 Cucumis melo HOM05D002407 ORTHO05D002476 1.6e-23 114.0 206 51.5
Phvul.007G055400 Phaseolus vulgaris HOM05D002407 ORTHO05D002476 1.6e-23 114.0 216 49.1
Lj5g0016334 Lotus japonicus HOM05D002407 ORTHO05D002476 4.8e-23 112.5 227 47.1
Solyc09g075830.3 Solanum lycopersicum HOM05D002407 ORTHO05D002476 4.8e-23 112.5 214 48.1
PGR004G2462 Punica granatum HOM05D002407 ORTHO05D002476 4.0e-22 109.4 158 45.6
TPR.G5532 Trifolium pratense HOM05D002407 ORTHO05D002476 1.2e-21 107.8 225 46.7
Peaxi162Scf00437g00026 Petunia axillaris HOM05D002407 ORTHO05D002476 2.0e-21 107.1 221 46.2
Sc13g0004300 Simmondsia chinensis HOM05D002407 ORTHO05D002476 2.0e-21 107.1 221 48.9
PGSC0003DMG400031808 Solanum tuberosum HOM05D002407 ORTHO05D002476 2.6e-21 106.7 219 46.1
MSTRG.4019 Avicennia marina HOM05D002407 ORTHO05D002476 4.5e-21 105.9 226 34.5
Glyma.20G144400 Glycine max HOM05D002407 ORTHO05D002476 7.6e-21 105.1 228 46.9
Sed0021914 Sechium edule HOM05D002407 ORTHO05D002476 1.7e-20 104.0 217 48.8
Glyma.10G249300 Glycine max HOM05D002407 ORTHO05D002476 2.9e-20 103.2 228 46.5
THA.LOC104808535 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 7.1e-19 98.6 217 46.5
Nn4g26275 Nelumbo nucifera HOM05D002407 ORTHO05D002476 9.3e-19 98.2 218 46.8
Actinidia08503 Actinidia chinensis HOM05D002407 ORTHO05D002476 1.2e-18 97.8 206 36.9
Aa31LG8G8910 Aethionema arabicum HOM05D002407 ORTHO05D002476 1.2e-18 97.8 226 35.8
TAR636G3152 Trochodendron aralioides HOM05D002407 ORTHO05D002476 1.2e-18 97.8 233 38.6
AUR62038105 Chenopodium quinoa HOM05D002407 ORTHO05D002476 4.6e-18 95.9 216 37.5
Carub.0003s2254 Capsella rubella HOM05D002407 ORTHO05D002476 5.1e-17 92.4 220 35.5
CAN.G907.19 Capsicum annuum HOM05D002407 ORTHO05D002476 5.1e-17 92.4 206 44.2
Ah.13g073870 Amaranthus hybridus HOM05D002407 ORTHO05D002476 1.5e-16 90.9 229 38.4
Sed0008106 Sechium edule HOM05D002407 ORTHO05D002476 1.9e-16 90.5 209 48.3
TAR362G1005 Trochodendron aralioides HOM05D002407 ORTHO05D002476 2.5e-16 90.1 256 41.0
BcaB06g26339 Brassica carinata HOM05D002407 ORTHO05D002476 5.6e-16 89.0 142 42.3
A05p26430 Brassica napus HOM05D002407 ORTHO05D002476 1.6e-15 87.4 228 34.2
BraA05t21516Z Brassica rapa HOM05D002407 ORTHO05D002476 1.6e-15 87.4 228 34.2
MSTRG.24745 Avicennia marina HOM05D002407 ORTHO05D002476 2.1e-15 87.0 207 30.4
Hund12142 Selenicereus undatus HOM05D002407 ORTHO05D002476 2.1e-15 87.0 219 40.2
BcaC05g28079 Brassica carinata HOM05D002407 ORTHO05D002476 2.8e-15 86.7 228 34.2
C05p41010 Brassica napus HOM05D002407 ORTHO05D002476 2.8e-15 86.7 228 34.2
BolC5t32844H Brassica oleracea HOM05D002407 ORTHO05D002476 2.8e-15 86.7 228 34.2
TAR633G1175 Trochodendron aralioides HOM05D002407 ORTHO05D002476 2.8e-15 86.7 140 44.3
DCAR_027191 Daucus carota HOM05D002407 ORTHO05D002476 3.6e-15 86.3 207 34.3
Nn1g02265 Nelumbo nucifera HOM05D002407 ORTHO05D002476 8.1e-15 85.1 130 44.6
AL7G40870 Arabidopsis lyrata HOM05D002407 ORTHO05D002476 2.4e-14 83.6 202 35.6
AT3G22380 Arabidopsis thaliana HOM05D002407 ORTHO05D002476 6.9e-14 82.0 218 32.6
CSS0005054 Camellia sinensis var. sinensis HOM05D002407 ORTHO05D002476 6.9e-14 82.0 233 43.3
DCAR_027192 Daucus carota HOM05D002407 ORTHO05D002476 6.9e-14 82.0 193 43.5
unitig_32.g10811 Utricularia gibba HOM05D002407 ORTHO05D002476 9.0e-14 81.6 207 33.8
ClCG06G006080 Citrullus lanatus HOM05D002407 ORTHO05D002476 1.5e-13 80.9 147 39.5
Thhalv10019888m.g Eutrema salsugineum HOM05D002407 ORTHO05D002476 2.0e-13 80.5 141 41.1
Lj6C594G25 Lonicera japonica HOM05D002407 ORTHO05D002476 4.5e-13 79.3 222 30.6
A01p32710 Brassica napus HOM05D002407 ORTHO05D002476 5.8e-13 79.0 246 39.4
BraA01t03399Z Brassica rapa HOM05D002407 ORTHO05D002476 5.8e-13 79.0 246 39.4
Sp3g20150 Schrenkiella parvula HOM05D002407 ORTHO05D002476 7.6e-13 78.6 224 34.4
BcaC09g49170 Brassica carinata HOM05D002407 ORTHO05D002476 9.9e-13 78.2 246 39.0
BolC1t04147H Brassica oleracea HOM05D002407 ORTHO05D002476 9.9e-13 78.2 246 39.0
Carub.0007s2714 Capsella rubella HOM05D002407 ORTHO05D002476 9.9e-13 78.2 189 35.4
C01p41910 Brassica napus HOM05D002407 ORTHO05D002476 2.9e-12 76.6 242 32.2
Rhsim02G0022900 Rhododendron simsii HOM05D002407 ORTHO05D002476 2.9e-12 76.6 201 43.8
BolC3t17519H Brassica oleracea HOM05D002407 ORTHO05D002476 6.4e-12 75.5 212 33.5
CARHR098270 Cardamine hirsuta HOM05D002407 ORTHO05D002476 6.4e-12 75.5 139 40.3
AUR62038630 Chenopodium quinoa HOM05D002407 ORTHO05D002476 8.4e-12 75.1 207 34.3
AL3G36660 Arabidopsis lyrata HOM05D002407 ORTHO05D002476 1.1e-11 74.7 236 31.8
BcaC01g03446 Brassica carinata HOM05D002407 ORTHO05D002476 1.4e-11 74.3 201 34.3
Hma1.2p1_3606F.1_g337000 Hydrangea macrophylla HOM05D002407 ORTHO05D002476 2.4e-11 73.6 119 39.5
C03p52490 Brassica napus HOM05D002407 ORTHO05D002476 4.2e-11 72.8 211 40.3
Nitab4.5_0007048g0010 Nicotiana tabacum HOM05D002407 ORTHO05D002476 5.5e-11 72.4 137 38.7
Actinidia36974 Actinidia chinensis HOM05D002407 ORTHO05D002476 9.3e-11 71.6 216 31.5
SalBow2G0563 Salvia bowleyana HOM05D002407 ORTHO05D002476 9.3e-11 71.6 161 37.9
Nitab4.5_0000795g0080 Nicotiana tabacum HOM05D002407 ORTHO05D002476 1.6e-10 70.9 158 35.4
Oeu041218.1 Olea europaea HOM05D002407 ORTHO05D002476 3.5e-10 69.7 201 28.4
Sc25g0004400 Simmondsia chinensis HOM05D002407 ORTHO05D002476 3.5e-10 69.7 220 43.2
Lsat_1_v5_gn_5_148881 Lactuca sativa HOM05D002407 ORTHO05D002476 4.6e-10 69.3 232 40.9
THA.LOC104803022 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 4.6e-10 69.3 142 37.3
Lj6A599G41 Lonicera japonica HOM05D002407 ORTHO05D002476 1.0e-09 68.2 217 29.5
ECA234G2398 Erigeron canadensis HOM05D002407 ORTHO05D002476 1.3e-09 67.8 238 32.4
Actinidia36977 Actinidia chinensis HOM05D002407 ORTHO05D002476 1.8e-09 67.4 213 30.0
Sabra03G0158500 Salix brachista HOM05D002407 ORTHO05D002476 1.8e-09 67.4 86 50.0
MBI04_g44890_MAGBIO Magnolia biondii HOM05D002407 ORTHO05D002476 2.3e-09 67.0 242 35.1
THA.LOC104822274 Tarenaya hassleriana HOM05D002407 ORTHO05D002476 2.3e-09 67.0 215 39.1
Actinidia40180 Actinidia chinensis HOM05D002407 ORTHO05D002476 3.9e-09 66.2 208 40.9
HanXRQChr04g0111791 Helianthus annuus HOM05D002407 ORTHO05D002476 8.7e-09 65.1 209 37.8
Potri.002G052300 Populus trichocarpa HOM05D002407 ORTHO05D002476 2.5e-08 63.5 219 28.3
HanXRQChr04g0111801 Helianthus annuus HOM05D002407 ORTHO05D002476 3.3e-08 63.2 208 37.0
Aqoxy2G03363 Aquilegia oxysepala HOM05D002407 ORTHO05D002476 4.8e-07 59.3 235 38.3
Sabra02G0042400 Salix brachista HOM05D002407 ORTHO05D002476 6.2e-07 58.9 162 32.7
Potri.005G210200 Populus trichocarpa HOM05D002407 ORTHO05D002476 1.4e-06 57.8 99 37.4
Psat6g116480 Pisum sativum HOM05D006132 ORTHO05D007305 4.0e-06 56.2 82 42.7


User provided reference genes

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