Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.8e-75 285.8 145 100.0
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.0e-53 212.6 141 78.7
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 4.4e-53 211.5 141 78.7
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 3.8e-44 181.8 141 68.1
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.6e-42 176.4 141 64.5
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 3.0e-41 172.2 130 68.5
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 3.0e-41 172.2 141 63.8
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 5.1e-41 171.4 141 63.8
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 1.1e-40 170.2 141 62.4
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 4.3e-40 168.3 141 63.1
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 5.6e-40 167.9 138 60.1
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 1.6e-39 166.4 132 63.6
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.1e-39 166.0 141 63.1
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 8.1e-39 164.1 141 63.1
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 8.1e-39 164.1 142 61.3
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 8.1e-39 164.1 138 60.9
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 8.1e-39 164.1 138 60.9
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.1e-38 163.7 130 65.4
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.8e-38 162.9 138 60.9
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.4e-38 162.5 141 61.0
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 4.0e-38 161.8 140 60.0
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.2e-37 160.2 138 59.4
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 7.6e-37 157.5 141 58.2
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 9.9e-37 157.1 141 58.9
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 9.9e-37 157.1 138 60.1
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 1.7e-36 156.4 140 59.3
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 1.7e-36 156.4 141 58.2
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 1.7e-36 156.4 141 56.0
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.7e-36 156.4 139 58.3
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 2.2e-36 156.0 140 57.1
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 8.4e-36 154.1 140 56.4
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.9e-35 152.9 130 58.5
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 5.4e-35 151.4 141 56.0
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 9.3e-35 150.6 140 59.3
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 9.3e-35 150.6 137 58.4
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 1.2e-34 150.2 141 56.0
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 1.2e-34 150.2 140 59.3
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.2e-34 150.2 137 58.4
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.6e-34 149.8 141 55.3
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 3.5e-34 148.7 137 57.7
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 7.9e-34 147.5 135 57.0
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 1.0e-33 147.1 145 56.6
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 1.8e-33 146.4 141 53.9
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 2.3e-33 146.0 141 53.9
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.9e-33 145.2 141 53.2
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 6.7e-33 144.4 149 55.0
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 6.7e-33 144.4 140 53.6
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 8.7e-33 144.1 141 56.7
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 2.5e-32 142.5 130 57.7
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 3.3e-32 142.1 129 58.9
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 4.3e-32 141.7 137 57.7
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 5.6e-32 141.4 138 56.5
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 5.6e-32 141.4 140 54.3
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 7.4e-32 141.0 137 56.9
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 1.3e-31 140.2 140 55.0
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 1.6e-31 139.8 137 56.2
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 3.7e-31 138.7 129 57.4
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 3.7e-31 138.7 135 52.6
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 6.2e-31 137.9 129 55.8
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 1.1e-30 137.1 141 53.2
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 1.1e-30 137.1 141 48.9
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.1e-30 137.1 141 48.9
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.4e-30 136.7 129 57.4
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 1.8e-30 136.3 141 51.1
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.1e-30 135.6 129 54.3
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 3.1e-30 135.6 129 57.4
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 4.0e-30 135.2 145 53.8
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 4.0e-30 135.2 129 58.9
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 5.3e-30 134.8 141 51.8
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 5.3e-30 134.8 142 51.4
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 5.3e-30 134.8 129 54.3
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 6.9e-30 134.4 130 50.8
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 6.9e-30 134.4 130 56.2
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.2e-29 133.7 140 51.4
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 1.2e-29 133.7 140 53.6
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.5e-29 133.3 141 51.1
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.0e-29 132.9 131 55.0
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 3.4e-29 132.1 141 48.2
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 4.5e-29 131.7 140 50.7
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 5.8e-29 131.3 140 50.7
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 5.8e-29 131.3 141 51.8
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 9.9e-29 130.6 129 53.5
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 9.9e-29 130.6 144 50.7
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 1.7e-28 129.8 143 52.4
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 3.8e-28 128.6 140 50.0
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 3.8e-28 128.6 143 51.7
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 8.4e-28 127.5 140 48.6
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 4.2e-27 125.2 129 55.0
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.0e-25 120.6 133 48.9
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 1.3e-25 120.2 137 47.4
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 2.3e-25 119.4 140 48.6
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 2.8e-23 112.5 139 48.9
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 4.5e-21 105.1 135 44.4
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.9e-16 89.7 98 48.0
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 9.7e-16 87.4 99 45.5
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 5.3e-06 55.1 49 57.1
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 9.1e-06 54.3 131 35.9


User provided reference genes

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