Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 1.8e-121 440.7 588 100.0
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 2.3e-108 397.1 588 95.6
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 2.2e-98 364.0 588 84.7
Glyma.13G197700 Glycine max HOM05D007347 ORTHO05D009296 6.3e-82 309.3 175 85.1
Lj3g0007423 Lotus japonicus HOM05D007347 ORTHO05D009296 1.4e-76 291.6 589 76.2
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 1.6e-69 268.1 580 79.5
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 8.0e-69 265.8 578 75.4
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 4.0e-68 263.5 588 82.3
Lalb_Chr19g0132391 Lupinus albus HOM05D007347 ORTHO05D009296 2.6e-67 260.8 175 72.6
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 1.5e-59 235.0 176 63.1
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 7.1e-57 226.1 174 64.4
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 9.2e-57 225.7 175 61.1
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 4.6e-56 223.4 174 65.5
Haze_14081 Corylus avellana HOM05D007347 ORTHO05D009296 6.0e-56 223.0 175 62.3
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 1.3e-55 221.9 171 63.2
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.7e-55 221.5 166 65.7
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.7e-55 221.5 166 65.7
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 2.3e-55 221.1 174 62.1
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 3.9e-55 220.3 166 65.7
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 3.9e-55 220.3 171 62.6
FAN23G0930 Fragaria x ananassa HOM05D007347 ORTHO05D009296 5.1e-55 219.9 166 65.1
Cfa007995 Carpinus fangiana HOM05D007347 ORTHO05D009296 1.9e-54 218.0 165 63.6
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 2.5e-54 217.6 166 65.1
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 3.3e-54 217.2 166 65.1
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 3.3e-54 217.2 166 65.1
TWI15G0869 Tripterygium wilfordii HOM05D007347 ORTHO05D009296 4.3e-54 216.9 175 62.9
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 3.1e-52 210.7 164 62.8
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 2.6e-51 207.6 164 62.2
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 5.8e-51 206.5 173 56.6
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 5.8e-51 206.5 173 56.6
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 9.9e-51 205.7 165 61.8
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 4.9e-50 203.4 167 59.3
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 1.1e-49 202.2 166 60.2
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 2.4e-49 201.1 167 58.7
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 3.2e-49 200.7 174 58.6
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 4.1e-49 200.3 167 59.3
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 7.1e-49 199.5 175 58.3
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 7.1e-49 199.5 173 59.0
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 9.2e-49 199.1 172 61.0
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 2.1e-48 198.0 170 60.0
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 2.7e-48 197.6 173 58.4
Gohir.A03G183300 Gossypium hirsutum HOM05D007347 ORTHO05D009296 3.5e-48 197.2 167 58.1
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 3.5e-48 197.2 167 56.9
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 3.5e-48 197.2 167 56.9
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 6.0e-48 196.4 165 59.4
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 7.8e-48 196.1 155 61.3
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 1.3e-47 195.3 169 59.2
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 1.7e-47 194.9 172 58.7
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 6.6e-47 193.0 175 55.4
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 1.1e-46 192.2 167 56.9
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 1.5e-46 191.8 167 56.3
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 1.5e-46 191.8 167 56.3
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 2.5e-46 191.0 162 58.6
MBI03_g44527_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 2.5e-46 191.0 178 52.8
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 3.3e-46 190.7 174 57.5
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 5.6e-46 189.9 178 53.9
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 5.6e-46 189.9 167 55.7
Sabra17G0091200 Salix brachista HOM05D007347 ORTHO05D009296 7.3e-46 189.5 170 56.5
Lsat_1_v5_gn_2_86161 Lactuca sativa HOM05D007347 ORTHO05D009296 4.7e-45 186.8 165 57.6
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 6.2e-45 186.4 164 55.5
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 3.1e-44 184.1 166 55.4
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 6.8e-44 183.0 173 53.2
FAN28G0832 Fragaria x ananassa HOM05D007347 ORTHO05D009296 3.4e-43 180.6 178 56.2
PSO782G5207 Papaver somniferum HOM05D007347 ORTHO05D009296 3.4e-43 180.6 164 53.0
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 7.6e-43 179.5 165 54.5
Sc10g0001490 Simmondsia chinensis HOM05D007347 ORTHO05D009296 9.9e-43 179.1 175 51.4
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 2.2e-42 177.9 165 55.8
AUR62019500 Chenopodium quinoa HOM05D007347 ORTHO05D009296 8.4e-42 176.0 165 52.1
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 2.7e-40 171.0 165 54.5
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 3.9e-39 167.2 156 55.1
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 5.6e-38 163.3 177 46.9
AL7G51690 Arabidopsis lyrata HOM05D007347 ORTHO05D009296 7.3e-38 162.9 166 53.6
BraA04t16830Z Brassica rapa HOM05D007347 ORTHO05D009296 1.4e-36 158.7 164 51.8
Thhalv10028323m.g Eutrema salsugineum HOM05D007347 ORTHO05D009296 1.8e-36 158.3 166 51.8
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 2.4e-36 157.9 178 47.8
AT5G38730 Arabidopsis thaliana HOM05D007347 ORTHO05D009296 6.9e-36 156.4 165 53.3
BcaC02g09666 Brassica carinata HOM05D007347 ORTHO05D009296 1.2e-35 155.6 164 50.6
C04p45350 Brassica napus HOM05D007347 ORTHO05D009296 1.2e-35 155.6 164 50.6
BolC4t26117H Brassica oleracea HOM05D007347 ORTHO05D009296 1.2e-35 155.6 164 50.6
Carub.0007s3713 Capsella rubella HOM05D007347 ORTHO05D009296 1.2e-35 155.6 166 51.2
A04p11620 Brassica napus HOM05D007347 ORTHO05D009296 1.5e-35 155.2 164 50.6
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 2.0e-35 154.8 164 50.0
SpUn0124_0020 Schrenkiella parvula HOM05D007347 ORTHO05D009296 7.6e-35 152.9 177 49.2
SpUn0185_0030 Schrenkiella parvula HOM05D007347 ORTHO05D009296 7.6e-35 152.9 177 49.2
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 6.4e-34 149.8 159 51.6
Ca_23964_v3 Cicer arietinum L. HOM05D007347 ORTHO05D009296 4.6e-32 143.7 489 85.5
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 2.8e-29 134.4 95 67.4
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 5.3e-28 130.2 174 40.8
MBI03_g13436_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 9.9e-27 125.9 96 61.5
AUR62036136 Chenopodium quinoa HOM05D007347 ORTHO05D009296 1.3e-26 125.6 96 62.5
ECA238G4434 Erigeron canadensis HOM05D007347 ORTHO05D009296 1.7e-26 125.2 95 65.3
COL.COLO4_37044 Corchorus olitorius HOM05D007347 ORTHO05D009296 1.6e-16 92.0 70 60.0
DCAR_010986 Daucus carota HOM05D007347 ORTHO05D009296 2.9e-10 71.2 71 45.1
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 1.9e-09 68.6 62 53.2
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 7.9e-08 63.2 69 44.9
SGA_v2.0_scaffold4G02364 Striga asiatica HOM05D007347 ORTHO05D009296 1.0e-07 62.8 67 40.3
MBI03_g44528_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 8.7e-07 59.7 63 44.4
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 1.1e-06 59.3 71 46.5
Hund04386 Selenicereus undatus HOM05D006931 ORTHO05D008782 1.1e-06 59.3 169 25.4
HanXRQChr02g0059161 Helianthus annuus HOM05D006888 ORTHO05D008371 1.9e-06 58.5 160 26.2
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.5e-06 58.2 115 31.3
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.5e-06 58.2 115 31.3
Zm00001eb259350 Zea mays HOM05D007347 ORTHO05D009296 2.5e-06 58.2 155 31.6
FAN05G5053 Fragaria x ananassa HOM05D006931 ORTHO05D008782 3.3e-06 57.8 169 26.0
Aa31LG5G12250 Aethionema arabicum HOM05D006931 ORTHO05D008782 4.3e-06 57.4 173 26.0
Hund23024 Selenicereus undatus HOM05D006931 ORTHO05D008782 4.3e-06 57.4 169 24.9
BraA01t01749Z Brassica rapa HOM05D003050 ORTHO05D003513 7.4e-06 56.6 172 25.0
CARHR264050 Cardamine hirsuta HOM05D007347 ORTHO05D009296 7.4e-06 56.6 54 44.4
AL7G26160 Arabidopsis lyrata HOM05D006931 ORTHO05D008782 9.7e-06 56.2 172 25.0
Sp7g24650 Schrenkiella parvula HOM05D006931 ORTHO05D008782 9.7e-06 56.2 172 25.6


User provided reference genes

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