Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 1.7e-185 652.5 320 100.0
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 1.9e-149 532.7 332 80.7
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 9.2e-136 487.3 318 77.4
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 6.6e-134 481.1 319 77.7
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 3.9e-86 322.4 295 59.0
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 3.9e-86 322.4 295 59.0
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 9.1e-83 311.2 295 56.9
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 6.5e-81 305.1 296 55.1
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 2.3e-78 296.6 320 54.4
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 2.3e-78 296.6 297 54.5
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 5.2e-78 295.4 302 53.6
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 6.3e-76 288.5 311 53.4
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 6.3e-68 261.9 339 48.1
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 8.2e-68 261.5 350 46.9
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 1.8e-67 260.4 309 49.8
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 2.9e-65 253.1 318 47.8
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 6.1e-55 218.8 311 45.7
arahy.Tifrunner.gnm1.ann1.IJY9PN Arachis hypogaea HOM05D007266 ORTHO05D005982 2.3e-54 216.9 300 46.3
Glyma.11G158200 Glycine max HOM05D007266 ORTHO05D005982 1.5e-53 214.2 230 56.5
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 9.2e-51 204.9 366 38.5
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 1.3e-49 201.1 349 40.4
Lj3g0005568 Lotus japonicus HOM05D007266 ORTHO05D005982 3.8e-49 199.5 239 51.0
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 6.6e-49 198.7 355 37.2
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.9e-48 197.2 352 36.9
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.5e-48 196.8 353 37.7
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 9.5e-48 194.9 351 39.0
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 9.5e-48 194.9 353 37.4
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.1e-47 193.7 353 37.4
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 2.1e-47 193.7 360 36.7
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 2.8e-47 193.4 355 37.5
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 2.3e-46 190.3 353 37.4
Lalb_Chr01g0007431 Lupinus albus HOM05D007266 ORTHO05D005982 5.7e-45 185.7 193 53.9
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 3.7e-44 183.0 353 35.1
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 1.1e-43 181.4 330 37.6
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 2.4e-43 180.3 357 38.4
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 9.2e-43 178.3 355 35.5
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 8.6e-41 171.8 366 36.1
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 8.6e-41 171.8 336 37.2
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 3.6e-39 166.4 305 37.4
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 6.2e-39 165.6 292 38.4
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 1.8e-38 164.1 330 35.5
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 1.5e-37 161.0 352 32.7
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 3.4e-37 159.8 345 33.9
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 3.7e-36 156.4 359 32.0
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 3.5e-34 149.8 343 33.5
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 1.7e-33 147.5 306 37.3
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 3.9e-33 146.4 316 33.9
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 2.5e-32 143.7 326 32.8
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 4.7e-31 139.4 304 35.5
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 1.7e-28 131.0 331 31.7
Lalb_Chr01g0007421 Lupinus albus HOM05D007266 ORTHO05D005982 3.7e-28 129.8 127 54.3
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 8.3e-28 128.6 232 38.8
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 2.4e-27 127.1 332 31.0
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 4.1e-27 126.3 349 28.4
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 5.4e-27 125.9 282 33.7
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 9.2e-27 125.2 332 31.6
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 2.7e-26 123.6 353 30.3
Oeu013066.1 Olea europaea HOM05D007266 ORTHO05D005982 3.3e-24 116.7 324 31.2
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 4.3e-24 116.3 389 28.5
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 4.3e-24 116.3 283 33.6
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 7.3e-24 115.5 420 27.4
DCAR_029711 Daucus carota HOM05D007266 ORTHO05D005982 1.6e-23 114.4 322 29.5
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 4.0e-22 109.8 155 41.9
C05p55490 Brassica napus HOM05D008873 ORTHO05D005982 4.9e-20 102.8 311 28.6
Thhalv10021314m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 6.4e-20 102.4 307 29.6
Sp3g10530 Schrenkiella parvula HOM05D008873 ORTHO05D005982 1.1e-19 101.7 303 27.7
THA.LOC104799328 Tarenaya hassleriana HOM05D008873 ORTHO05D005982 1.4e-19 101.3 308 29.2
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 2.4e-19 100.5 149 40.3
QL04p021458 Quercus lobata HOM05D007266 ORTHO05D005982 2.4e-19 100.5 104 53.8
QL07p029253 Quercus lobata HOM05D007266 ORTHO05D005982 2.4e-19 100.5 104 53.8
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 2.4e-19 100.5 149 40.3
CARHR086860 Cardamine hirsuta HOM05D008873 ORTHO05D005982 3.2e-19 100.1 314 29.9
AL3G23970 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 5.4e-19 99.4 306 28.1
AT3G12320 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 5.4e-19 99.4 300 28.0
BcaC05g29270 Brassica carinata HOM05D008873 ORTHO05D005982 5.4e-19 99.4 309 28.2
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.1e-19 99.0 116 46.6
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 7.1e-19 99.0 131 41.2
A05p37060 Brassica napus HOM05D008873 ORTHO05D005982 9.2e-19 98.6 308 29.2
Carub.0003s1168 Capsella rubella HOM05D008873 ORTHO05D005982 9.2e-19 98.6 305 28.2
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 2.1e-18 97.4 308 28.9
BcaB04g21084 Brassica carinata HOM05D008873 ORTHO05D005982 3.5e-18 96.7 308 28.2
BcaB04g21086 Brassica carinata HOM05D008873 ORTHO05D005982 3.5e-18 96.7 308 28.2
BraA03t12914Z Brassica rapa HOM05D008873 ORTHO05D005982 1.7e-17 94.4 304 27.3
Oeu058685.1 Olea europaea HOM05D007266 ORTHO05D005982 2.3e-17 94.0 320 28.8
A03p37600 Brassica napus HOM05D008873 ORTHO05D005982 8.7e-17 92.0 304 27.0
CANSAT56G2989 Cannabis sativa HOM05D007266 ORTHO05D005982 8.7e-17 92.0 319 29.5
C09p69120 Brassica napus HOM05D008873 ORTHO05D005982 1.1e-16 91.7 315 28.9
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 1.1e-16 91.7 137 41.6
Migut.B01189 Erythranthe guttata HOM05D007266 ORTHO05D005982 1.9e-16 90.9 293 25.6
BcaNung04207 Brassica carinata HOM05D008873 ORTHO05D005982 2.5e-16 90.5 213 33.3
BcaC01g04052 Brassica carinata HOM05D008873 ORTHO05D005982 5.6e-16 89.4 311 28.0
C03p45590 Brassica napus HOM05D008873 ORTHO05D005982 5.6e-16 89.4 311 28.0
BolC3t16836H Brassica oleracea HOM05D008873 ORTHO05D005982 5.6e-16 89.4 311 28.0
Aa31LG3G6540 Aethionema arabicum HOM05D008873 ORTHO05D005982 7.3e-16 89.0 320 26.2
BolC9t59656H Brassica oleracea HOM05D008873 ORTHO05D005982 7.3e-16 89.0 315 28.6
Gohir.D05G284500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 7.3e-16 89.0 101 48.5
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 7.3e-16 89.0 297 26.6
A10p28780 Brassica napus HOM05D008873 ORTHO05D005982 2.1e-15 87.4 310 26.8
BolC5t34215H Brassica oleracea HOM05D008873 ORTHO05D005982 2.1e-15 87.4 320 26.6
AL6G17140 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 2.8e-15 87.0 304 27.3
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 2.8e-15 87.0 338 26.9
BraA10t44925Z Brassica rapa HOM05D008873 ORTHO05D005982 3.6e-15 86.7 310 26.8
Lsat_1_v5_gn_1_118261 Lactuca sativa HOM05D007266 ORTHO05D005982 3.6e-15 86.7 261 27.2
SalBow5G4193 Salvia bowleyana HOM05D007266 ORTHO05D005982 2.4e-14 84.0 304 27.3
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 3.1e-14 83.6 336 23.2
Ah.10g030010 Amaranthus hybridus HOM05D007266 ORTHO05D005982 5.2e-14 82.8 311 27.7
Carub.0006s0591 Capsella rubella HOM05D008873 ORTHO05D005982 9.0e-14 82.0 300 26.3
AUR62031740 Chenopodium quinoa HOM05D007266 ORTHO05D005982 9.0e-14 82.0 369 25.5
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 2.0e-13 80.9 342 24.3
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 3.4e-13 80.1 349 25.5
BcaC06g32527 Brassica carinata HOM05D008873 ORTHO05D005982 4.4e-13 79.7 311 24.8
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 7.6e-13 79.0 107 44.9
TAR623G0101 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.7e-12 77.8 134 34.3
Aqoxy1G00397_Aqoxy1G00398 Aquilegia oxysepala HOM05D007266 ORTHO05D005982 4.9e-12 76.3 95 40.0
BraA05t22503Z Brassica rapa HOM05D008873 ORTHO05D005982 4.9e-12 76.3 245 28.6
HanXRQChr05g0146291 Helianthus annuus HOM05D007266 ORTHO05D005982 4.9e-12 76.3 299 27.4
BcaB04g18684 Brassica carinata HOM05D008873 ORTHO05D005982 7.1e-11 72.4 103 40.8
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 1.6e-10 71.2 337 25.5
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 2.1e-10 70.9 149 32.9
HanXRQChr11g0341241 Helianthus annuus HOM05D007266 ORTHO05D005982 2.1e-10 70.9 93 40.9
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 2.1e-10 70.9 329 24.6
ECA248G2125 Erigeron canadensis HOM05D007266 ORTHO05D005982 3.5e-10 70.1 238 25.2
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 4.6e-10 69.7 310 24.5
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 6.0e-10 69.3 243 28.0
AT5G06980 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 1.3e-09 68.2 250 24.8
BcaB01g05709 Brassica carinata HOM05D008873 ORTHO05D005982 3.0e-09 67.0 298 24.8
SGA_v2.0_scaffold124G33643 Striga asiatica HOM05D007266 ORTHO05D005982 3.9e-09 66.6 105 37.1
CARHR206160 Cardamine hirsuta HOM05D008873 ORTHO05D005982 6.6e-09 65.9 101 43.6
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 1.9e-08 64.3 345 24.6
Peaxi162Scf00220g00313 Petunia axillaris HOM05D007266 ORTHO05D005982 2.5e-08 63.9 94 41.5
Solyc01g096630.3 Solanum lycopersicum HOM05D007266 ORTHO05D005982 7.3e-08 62.4 114 35.1
CSS0002395 Camellia sinensis var. sinensis HOM05D003662 ORTHO05D001824 8.1e-07 58.9 168 22.0
Aa31sc25G30 Aethionema arabicum HOM05D008873 ORTHO05D005982 2.4e-06 57.4 109 33.0
Glyma.11G154700 Glycine max HOM05D004414 ORTHO05D001824 2.4e-06 57.4 148 29.1
PSO135G0681 Papaver somniferum HOM05D007266 ORTHO05D005982 2.4e-06 57.4 113 38.9
PSO384G1467 Papaver somniferum HOM05D007266 ORTHO05D005982 3.1e-06 57.0 112 37.5
CSS0012064 Camellia sinensis var. sinensis HOM05D003662 ORTHO05D001824 4.0e-06 56.6 93 33.3
Oeu026157.1 Olea europaea HOM05D003662 ORTHO05D001824 6.9e-06 55.8 94 33.0
CDE04G1684 Ceratophyllum demersum HOM05D003662 ORTHO05D001824 9.0e-06 55.5 122 29.5


User provided reference genes

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