Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G155100 Phaseolus vulgaris HOM05D005990 ORTHO05D007908 1.6e-186 656.0 346 100.0
VMungo1127G2019 Vigna mungo HOM05D005990 ORTHO05D007908 2.8e-178 628.6 346 96.2
Glyma.12G147300 Glycine max HOM05D005990 ORTHO05D007908 2.5e-171 605.5 346 92.5
Glyma.06G254100 Glycine max HOM05D005990 ORTHO05D007908 2.1e-170 602.4 346 92.2
Lj3g0001925 Lotus japonicus HOM05D005990 ORTHO05D007908 2.2e-159 565.8 346 85.0
Ca_11848_v3 Cicer arietinum L. HOM05D005990 ORTHO05D007908 3.2e-150 535.4 345 82.0
Medtr8g464410 Medicago truncatula HOM05D005990 ORTHO05D007908 1.2e-141 506.9 347 79.5
Lalb_Chr01g0006431 Lupinus albus HOM05D005990 ORTHO05D007908 2.1e-141 506.1 310 88.1
QL08p018038 Quercus lobata HOM05D005990 ORTHO05D007908 3.3e-131 472.2 358 73.2
Cfa020505 Carpinus fangiana HOM05D005990 ORTHO05D007908 4.8e-130 468.4 363 71.6
CANSAT11G2493 Cannabis sativa HOM05D005990 ORTHO05D007908 8.2e-130 467.6 359 73.3
FvH4_3g20940 Fragaria vesca HOM05D005990 ORTHO05D007908 1.1e-129 467.2 369 71.5
Manes.03G116500 Manihot esculenta HOM05D005990 ORTHO05D007908 4.1e-129 465.3 323 78.9
FAN11G3728 Fragaria x ananassa HOM05D005990 ORTHO05D007908 3.4e-128 462.2 363 72.2
Cpa.g.sc80.114 Carica papaya HOM05D005990 ORTHO05D007908 1.3e-127 460.3 359 73.3
CiPaw.11G176500 Carya illinoinensis HOM05D005990 ORTHO05D007908 2.2e-127 459.5 360 71.7
Potri.001G406700 Populus trichocarpa HOM05D005990 ORTHO05D007908 3.8e-127 458.8 351 72.9
CSS0030462 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D007908 6.5e-127 458.0 336 75.3
arahy.Tifrunner.gnm1.ann1.NX1DPE Arachis hypogaea HOM05D005990 ORTHO05D007908 8.5e-127 457.6 380 70.3
PGR031G1979 Punica granatum HOM05D005990 ORTHO05D007908 1.4e-126 456.8 350 73.4
Prupe.4G189900 Prunus persica HOM05D005990 ORTHO05D007908 2.5e-126 456.1 359 72.1
RcHm_v2.0_Chr5g0035361 Rosa chinensis HOM05D005990 ORTHO05D007908 9.4e-126 454.1 328 76.2
arahy.Tifrunner.gnm1.ann1.3KJ3XQ Arachis hypogaea HOM05D005990 ORTHO05D007908 1.2e-125 453.8 380 70.0
Dinv22366 Davidia involucrata HOM05D005990 ORTHO05D007908 1.6e-125 453.4 288 84.7
RhsimUnG0258900 Rhododendron simsii HOM05D005990 ORTHO05D007908 1.6e-125 453.4 295 82.7
TAR626G1157 Trochodendron aralioides HOM05D005990 ORTHO05D007908 2.7e-125 452.6 359 72.7
CsaV3_3G005970 Cucumis sativus L. HOM05D005990 ORTHO05D007908 3.6e-125 452.2 329 74.8
ClCG10G006520 Citrullus lanatus HOM05D005990 ORTHO05D007908 6.1e-125 451.4 358 70.9
GSVIVG01014430001 Vitis vinifera HOM05D005990 ORTHO05D007908 7.9e-125 451.1 341 73.3
Hma1.2p1_1143F.1_g261060 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 1.0e-124 450.7 264 90.5
Actinidia35278 Actinidia chinensis HOM05D005990 ORTHO05D007908 1.4e-124 450.3 345 73.3
Nn1g06745 Nelumbo nucifera HOM05D005990 ORTHO05D007908 1.8e-124 449.9 331 74.9
Sabra16G0270400 Salix brachista HOM05D005990 ORTHO05D007908 1.8e-124 449.9 379 68.6
MELO3C016553.2 Cucumis melo HOM05D005990 ORTHO05D007908 2.3e-124 449.5 329 74.8
COL.COLO4_09478 Corchorus olitorius HOM05D005990 ORTHO05D007908 3.0e-124 449.1 351 72.1
Sabra16G0268100 Salix brachista HOM05D005990 ORTHO05D007908 3.0e-124 449.1 383 68.1
Gohir.D13G148400 Gossypium hirsutum HOM05D005990 ORTHO05D007908 3.9e-124 448.7 351 71.2
Gorai.013G166200 Gossypium raimondii HOM05D005990 ORTHO05D007908 3.9e-124 448.7 294 81.6
AUR62029313 Chenopodium quinoa HOM05D005990 ORTHO05D007908 6.7e-124 448.0 265 88.7
Gohir.A13G143600 Gossypium hirsutum HOM05D005990 ORTHO05D007908 6.7e-124 448.0 351 71.2
Sed0021962 Sechium edule HOM05D005990 ORTHO05D007908 6.7e-124 448.0 329 74.5
HanXRQChr05g0156471 Helianthus annuus HOM05D005990 ORTHO05D007908 8.8e-124 447.6 294 81.0
Atru.chr2.2820 Acer truncatum HOM05D005990 ORTHO05D007908 1.1e-123 447.2 361 71.5
Duzib213G0189 Durio zibethinus HOM05D005990 ORTHO05D007908 2.0e-123 446.4 288 83.0
Ciclev10009149m.g Citrus clementina HOM05D005990 ORTHO05D007908 3.3e-123 445.7 267 88.8
MD11G1237300 Malus domestica HOM05D005990 ORTHO05D007908 9.7e-123 444.1 289 82.7
AUR62015602 Chenopodium quinoa HOM05D005990 ORTHO05D007908 1.3e-122 443.7 345 71.0
Lsat_1_v5_gn_5_6860 Lactuca sativa HOM05D005990 ORTHO05D007908 1.7e-122 443.4 331 72.5
ECA246G2706 Erigeron canadensis HOM05D005990 ORTHO05D007908 2.8e-122 442.6 297 79.5
BcaB05g22125 Brassica carinata HOM05D005990 ORTHO05D007908 8.2e-122 441.0 291 82.1
Sp6g16330 Schrenkiella parvula HOM05D005990 ORTHO05D007908 2.4e-121 439.5 291 81.4
Thecc.07G071400 Theobroma cacao HOM05D005990 ORTHO05D007908 4.1e-121 438.7 285 82.1
Lj8A160T67 Lonicera japonica HOM05D005990 ORTHO05D007908 5.3e-121 438.3 264 87.5
BcaC03g14345 Brassica carinata HOM05D005990 ORTHO05D007908 6.9e-121 438.0 291 80.8
C02p17170 Brassica napus HOM05D005990 ORTHO05D007908 6.9e-121 438.0 291 80.8
Cc05_g12670 Coffea canephora HOM05D005990 ORTHO05D007908 1.2e-120 437.2 330 73.3
BolC2t07817H Brassica oleracea HOM05D005990 ORTHO05D007908 1.5e-120 436.8 271 84.9
A02p10420 Brassica napus HOM05D005990 ORTHO05D007908 2.6e-120 436.0 291 80.4
Aa31LG3G10250 Aethionema arabicum HOM05D005990 ORTHO05D007908 3.4e-120 435.6 290 81.0
THA.LOC104811848 Tarenaya hassleriana HOM05D005990 ORTHO05D007908 3.4e-120 435.6 306 79.4
BraA02t06108Z Brassica rapa HOM05D005990 ORTHO05D007908 5.9e-120 434.9 271 84.5
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 5.9e-120 434.9 283 82.3
AL8G29620 Arabidopsis lyrata HOM05D005990 ORTHO05D007908 7.7e-120 434.5 312 77.2
CARHR267580 Cardamine hirsuta HOM05D005990 ORTHO05D007908 7.7e-120 434.5 291 81.1
Os11g0140800 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 7.7e-120 434.5 288 80.6
AT5G54290 Arabidopsis thaliana HOM05D005990 ORTHO05D007908 1.3e-119 433.7 293 80.5
Thhalv10013940m.g Eutrema salsugineum HOM05D005990 ORTHO05D007908 1.3e-119 433.7 291 80.4
FAN21G0316 Fragaria x ananassa HOM05D005990 ORTHO05D007908 1.7e-119 433.3 380 65.8
Sc16g0006780 Simmondsia chinensis HOM05D005990 ORTHO05D007908 1.7e-119 433.3 326 73.6
PSO210G5100 Papaver somniferum HOM05D005990 ORTHO05D007908 3.8e-119 432.2 292 79.8
PGSC0003DMG402019249 Solanum tuberosum HOM05D005990 ORTHO05D007908 6.5e-119 431.4 337 71.2
Nitab4.5_0008686g0040 Nicotiana tabacum HOM05D005990 ORTHO05D007908 1.1e-118 430.6 334 70.7
MBI02_g35910_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 1.4e-118 430.3 289 81.0
Nitab4.5_0000297g0120 Nicotiana tabacum HOM05D005990 ORTHO05D007908 1.4e-118 430.3 353 68.6
CDE05G0179 Ceratophyllum demersum HOM05D005990 ORTHO05D007908 1.9e-118 429.9 334 72.2
Aqoxy4G01398 Aquilegia oxysepala HOM05D005990 ORTHO05D007908 2.5e-118 429.5 357 68.1
Solyc07g063570.4 Solanum lycopersicum HOM05D005990 ORTHO05D007908 2.5e-118 429.5 262 85.1
Sopen07g031750 Solanum pennellii HOM05D005990 ORTHO05D007908 4.2e-118 428.7 283 80.6
Carub.0008s1464 Capsella rubella HOM05D005990 ORTHO05D007908 1.6e-117 426.8 293 79.2
ATR0751G163 Amborella trichopoda HOM05D005990 ORTHO05D007908 2.1e-117 426.4 338 69.2
MSTRG.15206 Avicennia marina HOM05D005990 ORTHO05D007908 8.0e-117 424.5 353 67.4
Migut.M01860 Erythranthe guttata HOM05D005990 ORTHO05D007908 2.0e-115 419.9 289 78.2
Eucgr.F03355 Eucalyptus grandis HOM05D005990 ORTHO05D007908 2.0e-115 419.9 299 78.3
unitig_46.g18327 Utricularia gibba HOM05D005990 ORTHO05D007908 3.1e-113 412.5 274 78.5
HPP92_018217 Vanilla planifolia HOM05D005990 ORTHO05D007908 2.0e-112 409.8 257 84.4
Peaxi162Scf01216g00051 Petunia axillaris HOM05D005990 ORTHO05D007908 5.0e-111 405.2 280 76.4
TPR.G39565 Trifolium pratense HOM05D005990 ORTHO05D007908 6.5e-111 404.8 346 65.9
Haze_09528 Corylus avellana HOM05D005990 ORTHO05D007908 1.1e-110 404.1 318 70.8
SalBow7G3955 Salvia bowleyana HOM05D005990 ORTHO05D007908 4.2e-110 402.1 336 66.7
SGA_v2.0_scaffold9G04955 Striga asiatica HOM05D005990 ORTHO05D007908 5.3e-105 385.2 336 64.6
QL08p017936 Quercus lobata HOM05D005990 ORTHO05D007908 3.5e-104 382.5 284 76.1
FAN16G0288 Fragaria x ananassa HOM05D005990 ORTHO05D007908 4.5e-104 382.1 349 64.5
DCAR_008702 Daucus carota HOM05D005990 ORTHO05D007908 7.7e-104 381.3 281 75.4
Ah.04g165420 Amaranthus hybridus HOM05D005990 ORTHO05D007908 1.7e-103 380.2 308 69.2
Psat0s617g0120 Pisum sativum HOM05D005990 ORTHO05D007908 3.8e-103 379.0 279 75.6
vmacro09559 Vaccinium macrocarpon HOM05D005990 ORTHO05D007908 8.5e-103 377.9 247 82.2
SMO119G0067 Selaginella moellendorffii HOM05D005990 ORTHO05D007908 3.2e-102 375.9 300 69.3
AagrBONN_evm.TU.Sc2ySwM_344.980 Anthoceros agrestis HOM05D005990 ORTHO05D007908 4.7e-101 372.1 253 77.9
TWI38G1683 Tripterygium wilfordii HOM05D005990 ORTHO05D007908 5.2e-100 368.6 303 69.6
EL10Ac4g08059 Beta vulgaris HOM05D005990 ORTHO05D007908 5.7e-99 365.2 341 64.5
Mapoly0093s0077 Marchantia polymorpha HOM05D005990 ORTHO05D007908 4.8e-98 362.1 274 71.2
MBI02_g10990_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 3.1e-97 359.4 218 85.8
PSO832G2166 Papaver somniferum HOM05D005990 ORTHO05D007908 4.1e-97 359.0 262 76.3
Pp3c15_16730 Physcomitrium patens HOM05D005990 ORTHO05D007908 2.0e-96 356.7 265 71.3
Oeu055680.2 Olea europaea HOM05D005990 ORTHO05D007908 1.7e-90 337.0 286 67.5
Hma1.2p1_1143F.1_g261070 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 2.4e-89 333.2 196 89.8
CAN.G162.104 Capsicum annuum HOM05D005990 ORTHO05D007908 1.0e-84 317.8 267 67.0
CBR_g16976 Chara braunii HOM05D005990 ORTHO05D007908 2.9e-82 309.7 287 60.6
MBI02_g26442_MAGBIO Magnolia biondii HOM05D005990 ORTHO05D007908 7.5e-75 285.0 238 68.1
Actinidia18746 Actinidia chinensis HOM05D005990 ORTHO05D007908 2.1e-72 276.9 244 67.2
Cre07.g357800 Chlamydomonas reinhardtii HOM05D005990 ORTHO05D007908 2.3e-68 263.5 268 55.2
PRCOL_00006006 Prasinoderma coloniale HOM05D005990 ORTHO05D007908 2.0e-67 260.4 280 54.6
AagrBONN_evm.TU.Sc2ySwM_117.2025 Anthoceros agrestis HOM05D005990 ORTHO05D007908 1.6e-61 240.7 277 53.4
MCO16G378 Micromonas commoda HOM05D005990 ORTHO05D007908 2.1e-61 240.4 282 51.4
C03p17200 Brassica napus HOM05D005990 ORTHO05D007908 1.4e-60 237.7 230 62.2
BolC3t14134H Brassica oleracea HOM05D005990 ORTHO05D007908 1.0e-55 221.5 230 60.0
Os12g0137300 Oryza sativa ssp. japonica HOM05D005990 ORTHO05D007908 1.3e-55 221.1 165 73.9
BcaC01g06300 Brassica carinata HOM05D005990 ORTHO05D007908 7.1e-49 198.7 140 79.3
SEGI_00968 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 2.3e-47 193.7 138 76.1
Hma1.2p1_1302F.1_g274280 Hydrangea macrophylla HOM05D005990 ORTHO05D007908 7.9e-40 168.7 98 89.8
Haze_08411 Corylus avellana HOM05D005990 ORTHO05D007908 2.5e-38 163.7 142 69.0
MD03G1219200 Malus domestica HOM05D005990 ORTHO05D007908 3.7e-37 159.8 204 55.4
SEGI_31484 Sequoiadendron giganteum HOM05D005990 ORTHO05D007908 2.5e-33 147.1 93 82.8
CSS0033016 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 3.0e-31 140.2 157 55.4
CSS0043364 Camellia sinensis var. sinensis HOM05D005990 ORTHO05D043356 8.7e-31 138.7 157 54.8
HPP92_027973 Vanilla planifolia HOM05D005990 ORTHO05D007908 4.8e-29 132.9 90 77.8
HPP92_027972 Vanilla planifolia HOM05D005990 ORTHO05D007908 2.2e-21 107.5 80 72.5
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 3.2e-17 93.6 96 59.4
Solyc05g150137.1 Solanum lycopersicum HOM05D005990 ORTHO05D391672 3.0e-15 87.0 60 75.0
HanXRQChr12g0381681 Helianthus annuus HOM05D005990 ORTHO05D221923 8.2e-13 79.0 225 32.4
Sopen10g004100 Solanum pennellii HOM05D005990 ORTHO05D000950 1.0e-10 72.0 47 78.7
MBI07_g21055_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022192 5.7e-06 56.2 41 68.3
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 9.7e-06 55.5 29 96.6


User provided reference genes

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