Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G076400 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 4.5e-90 334.7 188 100.0
Phvul.010G098800 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 2.2e-89 332.4 188 99.5
VMungo0331G0855 Vigna mungo HOM05D004380 ORTHO05D005134 2.5e-88 328.9 188 97.9
Glyma.07G070900 Glycine max HOM05D004380 ORTHO05D005134 4.8e-84 314.7 188 94.7
arahy.Tifrunner.gnm1.ann1.522STQ Arachis hypogaea HOM05D004380 ORTHO05D005134 5.3e-83 311.2 188 87.8
Lalb_Chr04g0258181 Lupinus albus HOM05D004380 ORTHO05D005134 2.6e-82 308.9 188 88.8
Lj3g0000626 Lotus japonicus HOM05D004380 ORTHO05D005134 3.8e-81 305.1 188 88.8
Medtr8g030840 Medicago truncatula HOM05D004380 ORTHO05D005134 4.0e-78 295.0 188 81.9
Psat4g154840 Pisum sativum HOM05D004380 ORTHO05D005134 5.2e-78 294.7 188 87.8
Atru.chr1.3775 Acer truncatum HOM05D004380 ORTHO05D005134 2.8e-76 288.9 188 73.4
Cfa012380 Carpinus fangiana HOM05D004380 ORTHO05D005134 2.8e-76 288.9 190 73.7
TWI81G0890 Tripterygium wilfordii HOM05D004380 ORTHO05D005134 2.8e-76 288.9 188 74.5
CANSAT21G1629 Cannabis sativa HOM05D004380 ORTHO05D005134 2.4e-75 285.8 188 81.9
CiPaw.11G087400 Carya illinoinensis HOM05D004380 ORTHO05D005134 2.4e-75 285.8 190 74.7
Prupe.8G202500 Prunus persica HOM05D004380 ORTHO05D005134 9.1e-75 283.9 188 78.7
Actinidia10879 Actinidia chinensis HOM05D004380 ORTHO05D005134 1.0e-73 280.4 188 72.9
Manes.15G172200 Manihot esculenta HOM05D004380 ORTHO05D005134 5.0e-73 278.1 188 71.8
Dinv25182 Davidia involucrata HOM05D004380 ORTHO05D005134 4.2e-72 275.0 188 71.3
Nn6g33684 Nelumbo nucifera HOM05D004380 ORTHO05D005134 4.2e-72 275.0 188 69.7
MD16G1006500 Malus domestica HOM05D004380 ORTHO05D005134 7.2e-72 274.2 188 70.2
Cc01_g02120 Coffea canephora HOM05D004380 ORTHO05D005134 1.2e-71 273.5 188 69.7
Potri.003G087200 Populus trichocarpa HOM05D004380 ORTHO05D005134 1.2e-71 273.5 188 70.2
Gohir.D11G272400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 2.7e-71 272.3 188 80.3
vmacro14143 Vaccinium macrocarpon HOM05D004380 ORTHO05D005134 4.7e-71 271.6 188 70.7
GSVIVG01013206001 Vitis vinifera HOM05D004380 ORTHO05D005134 1.0e-70 270.4 188 70.2
Hma1.2p1_0311F.1_g121260 Hydrangea macrophylla HOM05D004380 ORTHO05D005134 1.8e-70 269.6 188 69.1
Rhsim07G0121900 Rhododendron simsii HOM05D004380 ORTHO05D005134 4.0e-70 268.5 188 69.1
RcHm_v2.0_Chr4g0446311 Rosa chinensis HOM05D004380 ORTHO05D005134 4.0e-70 268.5 188 68.1
Gohir.A11G262400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 5.2e-70 268.1 189 71.4
Gorai.007G293700 Gossypium raimondii HOM05D004380 ORTHO05D005134 6.8e-70 267.7 189 70.9
Thecc.05G299600 Theobroma cacao HOM05D004380 ORTHO05D005134 8.8e-70 267.3 188 69.1
TAR629G2821 Trochodendron aralioides HOM05D004380 ORTHO05D005134 8.8e-70 267.3 188 76.6
COL.COLO4_13527 Corchorus olitorius HOM05D004380 ORTHO05D005134 1.2e-69 266.9 188 70.2
Duzib128G0331 Durio zibethinus HOM05D004380 ORTHO05D005134 9.8e-69 263.8 188 78.2
QL03p017813 Quercus lobata HOM05D004380 ORTHO05D005134 1.3e-68 263.5 189 72.0
THA.LOC104814403 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 3.7e-68 261.9 188 67.6
ClCG03G011240 Citrullus lanatus HOM05D004380 ORTHO05D005134 4.8e-68 261.5 188 68.6
Solyc03g033950.4 Solanum lycopersicum HOM05D004380 ORTHO05D005134 6.3e-68 261.2 190 66.8
FAN17G2609 Fragaria x ananassa HOM05D004380 ORTHO05D005134 3.1e-67 258.8 188 65.4
Aa31LG9G15640 Aethionema arabicum HOM05D004380 ORTHO05D005134 4.1e-67 258.5 188 65.4
CsaV3_2G035720 Cucumis sativus L. HOM05D004380 ORTHO05D005134 4.1e-67 258.5 188 67.6
Haze_08305 Corylus avellana HOM05D004380 ORTHO05D005134 5.4e-67 258.1 215 61.9
ECA233G1538 Erigeron canadensis HOM05D004380 ORTHO05D005134 7.0e-67 257.7 188 67.0
FAN22G0510 Fragaria x ananassa HOM05D004380 ORTHO05D005134 9.1e-67 257.3 188 64.9
SGA_v2.0_scaffold86G26890 Striga asiatica HOM05D004380 ORTHO05D005134 9.1e-67 257.3 191 63.4
Sed0018208 Sechium edule HOM05D004380 ORTHO05D005134 1.6e-66 256.5 190 66.8
Ciclev10033653m.g Citrus clementina HOM05D004380 ORTHO05D005134 2.0e-66 256.1 188 77.1
FvH4_4g36560 Fragaria vesca HOM05D004380 ORTHO05D005134 2.0e-66 256.1 188 64.9
FAN07G2732 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.0e-66 256.1 188 64.4
FAN12G0331 Fragaria x ananassa HOM05D004380 ORTHO05D005134 2.0e-66 256.1 188 64.9
Cpa.g.sc69.34 Carica papaya HOM05D004380 ORTHO05D005134 3.5e-66 255.4 181 67.4
Sp1g27590 Schrenkiella parvula HOM05D004380 ORTHO05D005134 3.5e-66 255.4 189 66.7
CAN.G1336.5 Capsicum annuum HOM05D004380 ORTHO05D005134 4.5e-66 255.0 190 65.3
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 5.9e-66 254.6 190 63.2
Aqoxy3G00393 Aquilegia oxysepala HOM05D004380 ORTHO05D005134 1.0e-65 253.8 188 66.5
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea HOM05D004380 ORTHO05D005134 1.0e-65 253.8 188 79.8
Sopen03g006700 Solanum pennellii HOM05D004380 ORTHO05D005134 1.0e-65 253.8 190 64.7
DCAR_015696 Daucus carota HOM05D004380 ORTHO05D005134 1.3e-65 253.4 187 64.2
CDE02G1296 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 1.7e-65 253.1 188 72.9
PGSC0003DMG400022576 Solanum tuberosum HOM05D004380 ORTHO05D005134 1.7e-65 253.1 190 64.7
CDE11G0710 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 2.9e-65 252.3 188 66.0
Migut.J01084 Erythranthe guttata HOM05D004380 ORTHO05D005134 5.0e-65 251.5 191 63.4
arahy.Tifrunner.gnm1.ann1.I1PL9V Arachis hypogaea HOM05D004380 ORTHO05D005134 6.5e-65 251.1 158 85.4
Ah.09g224390 Amaranthus hybridus HOM05D004380 ORTHO05D005134 1.1e-64 250.4 190 67.9
Thhalv10007193m.g Eutrema salsugineum HOM05D004380 ORTHO05D005134 1.9e-64 249.6 189 65.1
ATR0665G406 Amborella trichopoda HOM05D004380 ORTHO05D005134 2.5e-64 249.2 188 69.1
BcaB03g13784 Brassica carinata HOM05D004380 ORTHO05D005134 3.2e-64 248.8 189 64.6
CARHR031210 Cardamine hirsuta HOM05D004380 ORTHO05D005134 1.2e-63 246.9 189 67.7
Lsat_1_v5_gn_6_63641 Lactuca sativa HOM05D004380 ORTHO05D005134 1.2e-63 246.9 187 62.6
BcaC05g27949 Brassica carinata HOM05D004380 ORTHO05D005134 2.1e-63 246.1 189 64.0
C05p39530 Brassica napus HOM05D004380 ORTHO05D005134 2.1e-63 246.1 189 64.0
EL10Ac4g09041 Beta vulgaris HOM05D004380 ORTHO05D005134 4.7e-63 245.0 188 63.3
BolC5t32694H Brassica oleracea HOM05D004380 ORTHO05D005134 6.1e-63 244.6 189 64.0
HanXRQChr16g0500491 Helianthus annuus HOM05D004380 ORTHO05D005134 8.0e-63 244.2 188 63.3
A05p25450 Brassica napus HOM05D004380 ORTHO05D005134 1.0e-62 243.8 189 63.5
BraA05t21429Z Brassica rapa HOM05D004380 ORTHO05D005134 1.0e-62 243.8 189 63.5
Carub.0001s3020 Capsella rubella HOM05D004380 ORTHO05D005134 1.0e-62 243.8 189 62.4
CAN.G1823.5 Capsicum annuum HOM05D004380 ORTHO05D005134 1.0e-62 243.8 190 63.2
HanXRQChr12g0372541 Helianthus annuus HOM05D004380 ORTHO05D005134 1.4e-62 243.4 188 66.5
Oeu045705.2 Olea europaea HOM05D004380 ORTHO05D005134 1.8e-62 243.0 197 61.4
Sabra03G0056900 Salix brachista HOM05D004380 ORTHO05D005134 3.0e-62 242.3 181 66.9
Peaxi162Scf01164g00006 Petunia axillaris HOM05D004380 ORTHO05D005134 5.2e-62 241.5 190 61.6
AL1G45970 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 6.8e-62 241.1 189 63.5
AT1G31870 Arabidopsis thaliana HOM05D004380 ORTHO05D005134 8.8e-62 240.7 189 63.0
PSO832G0693 Papaver somniferum HOM05D004380 ORTHO05D005134 7.5e-61 237.7 188 62.2
PSO782G4920 Papaver somniferum HOM05D004380 ORTHO05D005134 9.8e-61 237.3 188 61.7
CAN.G248.21 Capsicum annuum HOM05D004380 ORTHO05D005134 2.8e-60 235.7 189 69.3
Lj6C290G5 Lonicera japonica HOM05D004380 ORTHO05D005134 2.8e-60 235.7 264 48.9
PSO063G6462 Papaver somniferum HOM05D004380 ORTHO05D005134 3.7e-60 235.3 188 60.6
Actinidia31472 Actinidia chinensis HOM05D004380 ORTHO05D005134 8.3e-60 234.2 155 71.6
arahy.Tifrunner.gnm1.ann1.ARJY2C Arachis hypogaea HOM05D004380 ORTHO05D005134 1.4e-59 233.4 188 68.1
Os08g0178300 Oryza sativa ssp. japonica HOM05D004380 ORTHO05D005134 2.4e-59 232.6 187 61.5
Mapoly0062s0011 Marchantia polymorpha HOM05D004380 ORTHO05D005134 3.1e-59 232.3 188 61.7
CiPaw.04G096200 Carya illinoinensis HOM05D004380 ORTHO05D005134 4.1e-59 231.9 186 76.3
unitig_21.g20505 Utricularia gibba HOM05D004380 ORTHO05D005134 4.1e-59 231.9 190 60.0
TPR.G23111 Trifolium pratense HOM05D004380 ORTHO05D005134 7.0e-59 231.1 148 73.6
arahy.Tifrunner.gnm1.ann1.45D7QY Arachis hypogaea HOM05D004380 ORTHO05D005134 3.8e-57 225.3 158 84.2
arahy.Tifrunner.gnm1.ann1.MH0ZUI Arachis hypogaea HOM05D004380 ORTHO05D005134 3.8e-57 225.3 113 92.0
TPR.G20578 Trifolium pratense HOM05D004380 ORTHO05D005134 2.3e-54 216.1 113 86.7
HPP92_020120 Vanilla planifolia HOM05D004380 ORTHO05D005134 5.7e-53 211.5 168 62.5
Nitab4.5_0005084g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 9.8e-53 210.7 183 57.9
CARHR062710 Cardamine hirsuta HOM05D004380 ORTHO05D005134 1.7e-52 209.9 179 59.8
HPP92_020130 Vanilla planifolia HOM05D004380 ORTHO05D005134 1.7e-52 209.9 167 62.3
Cpa.g.sc69.32 Carica papaya HOM05D004380 ORTHO05D005134 2.2e-52 209.5 118 79.7
Pp3c3_10050 Physcomitrium patens HOM05D004380 ORTHO05D005134 1.8e-51 206.5 182 57.7
Hund11501 Selenicereus undatus HOM05D004380 ORTHO05D005134 3.2e-51 205.7 149 64.4
Sed0024296 Sechium edule HOM05D004380 ORTHO05D005134 7.8e-50 201.1 180 59.4
AagrBONN_evm.TU.Sc2ySwM_117.3835 Anthoceros agrestis HOM05D004380 ORTHO05D005134 2.3e-49 199.5 188 54.3
Aa31LG9G6660 Aethionema arabicum HOM05D004380 ORTHO05D005134 3.9e-49 198.7 152 62.5
THA.LOC104812727 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 2.1e-47 193.0 159 57.9
AUR62018778 Chenopodium quinoa HOM05D004380 ORTHO05D005134 6.8e-46 188.0 159 68.6
SEGI_39298 Sequoiadendron giganteum HOM05D004380 ORTHO05D005134 8.9e-46 187.6 159 59.7
DCAR_007574 Daucus carota HOM05D004380 ORTHO05D005134 4.9e-44 181.8 149 59.1
CBR_g26347 Chara braunii HOM05D004380 ORTHO05D005134 4.6e-42 175.3 202 50.5
Nitab4.5_0008421g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 3.0e-41 172.6 188 48.9
SMO144G0180 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 3.9e-41 172.2 188 49.5
AUR62007222 Chenopodium quinoa HOM05D004380 ORTHO05D005134 1.5e-40 170.2 193 49.7
SMO118G0163 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 3.1e-38 162.5 188 48.4
CSS0001415 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 4.0e-38 162.2 86 82.6
CSS0037993 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 4.0e-38 162.2 86 82.6
Haze_08308 Corylus avellana HOM05D004380 ORTHO05D005134 1.3e-33 147.1 155 54.2
Cre01.g003487 Chlamydomonas reinhardtii HOM05D004380 ORTHO05D005134 8.9e-30 134.4 195 40.5
MCO15G532 Micromonas commoda HOM05D004380 ORTHO05D005134 9.2e-27 124.4 185 38.9
Sp5g21510 Schrenkiella parvula HOM05D004380 ORTHO05D005134 1.6e-26 123.6 98 63.3
MELO3C024775.2 Cucumis melo HOM05D004380 ORTHO05D005134 5.2e-22 108.6 99 56.6
Potri.001G147100 Populus trichocarpa HOM05D004380 ORTHO05D005134 9.0e-22 107.8 85 62.4
PRCOL_00005638 Prasinoderma coloniale HOM05D004380 ORTHO05D005134 6.4e-20 101.7 196 35.7
Dinv40656 Davidia involucrata HOM05D000301 ORTHO05D000303 2.1e-18 96.7 56 73.2
AL3G52660 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 6.6e-17 91.7 66 62.1
Cfa026589 Carpinus fangiana HOM05D004380 ORTHO05D005134 3.2e-11 72.8 115 37.4
Oeu037610.2 Olea europaea HOM05D004380 ORTHO05D005134 9.3e-11 71.2 50 68.0
C05p31200 Brassica napus HOM05D004380 ORTHO05D005134 2.1e-10 70.1 64 57.8
Sc22g0001370 Simmondsia chinensis HOM05D004380 ORTHO05D005134 3.0e-09 66.2 48 77.1
TPR.G23078 Trifolium pratense HOM05D004380 ORTHO05D005134 3.3e-08 62.8 40 80.0
TPR.G11131 Trifolium pratense HOM05D004380 ORTHO05D005134 9.6e-08 61.2 40 77.5
COL.COLO4_33038 Corchorus olitorius HOM05D004380 ORTHO05D005134 1.6e-07 60.5 87 46.0
CAN.G1186.1 Capsicum annuum HOM05D004380 ORTHO05D005134 2.1e-07 60.1 49 65.3
Lj2C247T7 Lonicera japonica HOM05D004380 ORTHO05D005134 3.7e-07 59.3 47 59.6


User provided reference genes

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