Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 6.9e-281 969.9 472 100.0
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.0e-236 823.2 478 84.5
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 1.1e-228 796.6 524 76.5
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 4.9e-202 708.0 475 73.5
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 2.1e-200 702.6 476 73.5
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 9.6e-198 693.7 476 73.7
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.1e-177 627.1 477 66.0
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.2e-171 607.1 473 61.5
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 5.9e-171 604.7 477 63.7
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 7.6e-171 604.4 473 61.3
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 1.7e-170 603.2 475 62.3
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 6.5e-170 601.3 473 61.1
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.1e-169 600.5 471 62.2
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 2.5e-169 599.4 478 61.1
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 5.5e-169 598.2 469 64.2
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 1.6e-168 596.7 472 61.2
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 1.6e-168 596.7 469 62.0
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 7.9e-168 594.3 473 60.9
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 2.5e-166 589.3 472 60.8
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 1.7e-165 586.6 474 61.6
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 1.8e-164 583.2 473 59.8
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 5.9e-163 578.2 475 59.6
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 1.9e-161 573.2 477 60.0
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 2.1e-160 569.7 468 58.5
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 1.4e-159 567.0 475 58.9
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 1.4e-159 567.0 473 59.4
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 3.0e-159 565.8 479 59.5
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 5.1e-159 565.1 485 58.4
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 6.7e-159 564.7 475 58.5
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 1.7e-157 560.1 484 60.7
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 8.0e-152 541.2 450 59.3
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 6.7e-151 538.1 501 54.3
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 2.6e-150 536.2 489 54.6
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 2.6e-150 536.2 460 58.0
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.7e-149 533.5 484 55.6
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 7.7e-147 524.6 462 56.1
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.3e-146 523.9 476 55.0
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 5.0e-146 521.9 478 54.4
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 1.1e-145 520.8 473 54.3
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 1.2e-144 517.3 468 54.9
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 4.7e-144 515.4 477 56.2
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 1.8e-143 513.5 471 54.6
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 2.3e-143 513.1 466 52.8
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.0e-143 512.7 455 56.3
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 4.0e-143 512.3 471 54.4
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 1.7e-141 506.9 480 53.1
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.7e-141 506.9 480 53.8
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 2.7e-139 499.6 527 49.9
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 6.1e-136 488.4 472 51.7
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 6.1e-136 488.4 470 51.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 3.0e-135 486.1 481 52.4
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 4.0e-135 485.7 478 52.5
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 4.4e-134 482.3 477 52.0
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 7.5e-134 481.5 376 62.2
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 6.3e-133 478.4 461 53.6
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 5.4e-132 475.3 477 51.8
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 5.4e-132 475.3 388 60.1
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 2.0e-131 473.4 476 52.3
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 2.9e-130 469.5 475 50.9
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 1.5e-129 467.2 485 51.3
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 4.2e-129 465.7 471 51.6
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.2e-128 464.2 479 49.9
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 2.1e-128 463.4 513 48.9
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 2.8e-128 463.0 474 50.6
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 3.6e-128 462.6 390 57.4
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 1.8e-127 460.3 520 48.3
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 1.5e-126 457.2 387 59.9
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 5.7e-126 455.3 565 45.5
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.7e-125 453.8 528 47.9
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 9.2e-124 448.0 485 49.3
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 2.0e-123 446.8 522 46.4
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 2.3e-122 443.4 387 58.1
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.1e-121 441.0 465 51.2
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.1e-121 441.0 476 49.8
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 2.5e-121 439.9 434 53.5
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 4.3e-121 439.1 479 48.9
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 1.0e-119 434.5 458 49.8
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.0e-119 434.5 481 48.6
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.4e-116 424.1 479 45.9
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.7e-114 417.2 462 47.8
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 3.9e-114 416.0 513 46.2
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 3.9e-114 416.0 480 47.5
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.6e-107 394.0 508 44.1
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 1.3e-106 391.0 485 45.2
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 5.2e-103 379.0 455 44.8
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 5.2e-103 379.0 336 54.2
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 8.3e-101 371.7 326 53.1
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 7.1e-100 368.6 328 60.4
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 4.7e-96 355.9 464 41.4
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 3.9e-90 336.3 308 53.9
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.2e-88 331.3 496 36.5
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.6e-86 323.6 261 60.5
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 2.9e-85 320.1 273 57.1
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 9.3e-84 315.1 291 55.0
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 6.2e-80 302.4 284 53.9
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 5.8e-78 295.8 290 51.0
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 8.1e-72 275.4 291 50.5
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 7.9e-67 258.8 469 31.8
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 1.5e-62 244.6 206 56.8
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 1.2e-59 235.0 466 32.8
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 1.3e-56 224.9 190 56.3
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.1e-55 221.9 221 52.9
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.5e-54 218.0 158 62.7
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 5.9e-54 216.1 168 60.1
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 2.9e-53 213.8 184 57.1
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.1e-52 211.8 187 55.1
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 9.7e-41 172.2 161 50.9
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 7.2e-36 156.0 343 30.3
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 4.1e-31 140.2 190 40.5
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 1.4e-26 125.2 130 48.5
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 2.7e-22 110.9 132 43.9
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 1.0e-18 99.0 289 28.4
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.0e-18 99.0 89 55.1
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 2.6e-17 94.4 91 53.8
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 3.4e-17 94.0 56 73.2
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 6.3e-16 89.7 169 37.3
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 5.4e-15 86.7 450 25.8
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 2.5e-12 77.8 90 42.2
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.4e-07 62.0 100 39.0
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 2.4e-07 61.2 53 52.8
Peaxi162Scf00559g00110 Petunia axillaris HOM05D006389 ORTHO05D007863 1.2e-06 58.9 57 47.4


User provided reference genes

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