Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 1.1e-47 193.0 101 100.0
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 5.5e-42 174.1 101 90.1
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 9.3e-42 173.3 101 88.1
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 2.1e-41 172.2 101 88.1
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 2.1e-41 172.2 101 88.1
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 6.0e-41 170.6 101 87.1
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 3.0e-40 168.3 101 85.1
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 3.0e-40 168.3 101 85.1
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 1.1e-39 166.4 101 85.1
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 1.5e-39 166.0 101 84.2
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.9e-39 165.6 101 85.1
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.9e-39 165.6 101 85.1
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 1.9e-39 165.6 101 84.2
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 2.5e-39 165.2 101 84.2
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 4.3e-39 164.5 103 84.5
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 5.7e-39 164.1 101 83.2
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 7.4e-39 163.7 101 84.2
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 1.3e-38 162.9 101 85.1
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 4.8e-38 161.0 101 82.2
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 8.2e-38 160.2 101 81.2
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 8.2e-38 160.2 102 83.3
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 8.2e-38 160.2 101 82.2
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 8.2e-38 160.2 101 82.2
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.4e-37 158.7 100 82.0
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.0e-36 155.6 99 81.8
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 2.6e-36 155.2 100 81.0
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 1.0e-35 153.3 88 89.8
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 1.0e-35 153.3 88 89.8
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 8.4e-35 150.2 101 77.2
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 5.5e-34 147.5 101 75.2
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 9.3e-34 146.7 101 78.2
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 2.1e-33 145.6 99 77.8
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 75.2
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 2.7e-33 145.2 101 74.3
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 6.1e-33 144.1 99 78.8
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 1.8e-32 142.5 101 73.3
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.0e-32 141.7 100 76.0
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 9.7e-31 136.7 101 71.3
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.8e-30 135.2 86 84.9
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.1e-29 133.3 103 68.9
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 1.8e-29 132.5 80 87.5
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 7.2e-26 120.6 101 66.3
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.3e-24 115.5 77 79.2
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 5.7e-23 110.9 61 88.5
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 2.8e-22 108.6 58 87.9
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 5.0e-19 97.8 75 76.0
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 5.0e-19 97.8 93 60.2
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 8.5e-19 97.1 99 56.6
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 8.5e-19 97.1 99 56.6
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 8.5e-19 97.1 85 67.1
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.0e-16 90.1 101 54.5
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 2.6e-15 85.5 56 78.6
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 4.4e-15 84.7 52 82.7
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 1.4e-13 79.7 51 74.5
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.5e-12 75.1 49 81.6
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 4.5e-12 74.7 40 90.0
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 5.9e-12 74.3 58 67.2
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 3.8e-11 71.6 37 97.3
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 8.5e-11 70.5 48 77.1
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.7e-09 65.5 33 87.9
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 3.6e-09 65.1 43 79.1
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.1e-09 64.3 34 85.3
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.1e-09 64.3 34 85.3
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.1e-09 64.3 34 85.3
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.1e-09 64.3 34 85.3
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.1e-09 64.3 34 85.3
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 6.1e-09 64.3 34 85.3
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 6.1e-09 64.3 34 85.3
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.0e-09 63.9 33 84.8
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 79.4
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 82.4
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 1.0e-08 63.5 34 85.3
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.0e-08 62.0 32 84.4
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 8.8e-08 60.5 34 79.4


User provided reference genes

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