Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G121900 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 1.5e-65 252.7 123 100.0
Glyma.07G047000 Glycine max HOM05D001415 ORTHO05D001075 1.3e-13 80.1 52 84.6
Glyma.16G015200 Glycine max HOM05D001415 ORTHO05D001075 2.1e-11 72.8 54 79.6
Medtr8g023610 Medicago truncatula HOM05D001415 ORTHO05D001075 4.7e-11 71.6 51 78.4
Lalb_Chr04g0254011 Lupinus albus HOM05D001415 ORTHO05D001075 7.9e-11 70.9 51 76.5
Ca_23470_v3 Cicer arietinum L. HOM05D001415 ORTHO05D001075 1.0e-10 70.5 51 76.5
TPR.G26464 Trifolium pratense HOM05D001415 ORTHO05D001075 1.8e-10 69.7 51 76.5
COL.COLO4_30888 Corchorus olitorius HOM05D001415 ORTHO05D001075 8.8e-10 67.4 51 70.6
Gorai.011G053800 Gossypium raimondii HOM05D001415 ORTHO05D001075 5.7e-09 64.7 51 66.7
Thecc.06G132000 Theobroma cacao HOM05D001415 ORTHO05D001075 5.7e-09 64.7 51 68.6
Duzib192G0302 Durio zibethinus HOM05D001415 ORTHO05D001075 7.4e-09 64.3 51 68.6
Gohir.A10G049600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.4e-09 64.3 51 66.7
Gohir.D10G050300 Gossypium hirsutum HOM05D001415 ORTHO05D001075 7.4e-09 64.3 51 66.7
Gohir.D06G147900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 9.7e-09 63.9 51 66.7
Gorai.010G172400 Gossypium raimondii HOM05D001415 ORTHO05D001075 9.7e-09 63.9 51 66.7
Gohir.A06G142100 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.2e-08 62.8 51 66.7
Lalb_Chr10g0101041 Lupinus albus HOM05D001415 ORTHO05D001075 4.8e-08 61.6 51 70.6
Lj1g0021078 Lotus japonicus HOM05D001415 ORTHO05D001075 6.3e-08 61.2 51 70.6
Atru.chr1.4181 Acer truncatum HOM05D001415 ORTHO05D001075 8.2e-08 60.8 50 66.0
Lalb_Chr18g0044821 Lupinus albus HOM05D001415 ORTHO05D001075 8.2e-08 60.8 51 66.7
CiPaw.01G210100 Carya illinoinensis HOM05D001415 ORTHO05D001075 1.1e-07 60.5 45 68.9
Dinv37809 Davidia involucrata HOM05D001415 ORTHO05D001075 1.1e-07 60.5 44 72.7
Aqoxy7G04200 Aquilegia oxysepala HOM05D001415 ORTHO05D001075 1.8e-07 59.7 38 73.7
Gohir.A05G142400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 5.3e-07 58.2 52 59.6
Gorai.009G148600 Gossypium raimondii HOM05D001415 ORTHO05D001075 1.2e-06 57.0 52 59.6
Phvul.009G260600 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 1.2e-06 57.0 51 62.7
Potri.002G235101 Populus trichocarpa HOM05D001415 ORTHO05D001075 2.0e-06 56.2 42 69.0
SalBow6G2192 Salvia bowleyana HOM05D001415 ORTHO05D001075 2.0e-06 56.2 52 61.5
Migut.I01146 Erythranthe guttata HOM05D001415 ORTHO05D001075 2.6e-06 55.8 51 62.7
Gohir.D05G144700 Gossypium hirsutum HOM05D001415 ORTHO05D001075 3.4e-06 55.5 52 57.7
RcHm_v2.0_Chr2g0148241 Rosa chinensis HOM05D001415 ORTHO05D001075 3.4e-06 55.5 45 64.4
Aa31LG8G1630 Aethionema arabicum HOM05D000146 ORTHO05D007947 4.5e-06 55.1 33 81.8
CSS0014027 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 4.5e-06 55.1 36 80.6
Potri.003G073900 Populus trichocarpa HOM05D001415 ORTHO05D001075 4.5e-06 55.1 33 78.8
Manes.04G152500 Manihot esculenta HOM05D001415 ORTHO05D001075 5.9e-06 54.7 46 63.0
BraA08t32195Z Brassica rapa HOM05D001415 ORTHO05D001075 7.7e-06 54.3 33 78.8
MELO3C024301.2 Cucumis melo HOM05D001415 ORTHO05D001075 7.7e-06 54.3 29 86.2
CsaV3_7G033880 Cucumis sativus L. HOM05D001415 ORTHO05D001075 7.7e-06 54.3 29 86.2
PSO135G0377 Papaver somniferum HOM05D001415 ORTHO05D001075 7.7e-06 54.3 36 69.4


User provided reference genes

Program Settings