Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G113266 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 1.1e-92 343.2 168 100.0
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 7.6e-65 250.8 121 97.5
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 2.5e-63 245.7 121 95.9
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 2.2e-59 232.6 121 89.3
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 7.7e-57 224.2 122 87.7
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 6.3e-51 204.5 113 79.6
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 8.2e-51 204.1 122 78.7
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 9.1e-50 200.7 116 79.3
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 9.1e-50 200.7 120 76.7
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 2.6e-49 199.1 116 78.4
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 1.3e-48 196.8 113 78.8
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 5.0e-48 194.9 116 76.7
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 5.0e-48 194.9 121 72.7
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 7.2e-47 191.0 120 72.5
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 1.4e-45 186.8 119 73.1
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 3.0e-45 185.7 121 70.2
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 3.9e-45 185.3 120 69.2
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 5.1e-45 184.9 123 71.5
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 6.7e-45 184.5 118 70.3
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 8.8e-45 184.1 117 69.2
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.1e-44 183.7 120 68.3
Dinv21748 Davidia involucrata HOM05D004762 ORTHO05D005972 1.5e-44 183.3 115 70.4
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 1.5e-44 183.3 121 67.8
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 3.3e-44 182.2 117 70.1
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 4.4e-44 181.8 116 72.4
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 7.4e-44 181.0 120 68.3
DCAR_007786 Daucus carota HOM05D004762 ORTHO05D005972 9.7e-44 180.6 124 66.1
Actinidia33916 Actinidia chinensis HOM05D004762 ORTHO05D005972 1.7e-43 179.9 121 66.9
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 3.7e-43 178.7 121 68.6
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 3.7e-43 178.7 121 66.9
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 4.8e-43 178.3 117 69.2
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 6.3e-43 177.9 121 67.8
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 6.3e-43 177.9 121 69.4
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 6.3e-43 177.9 120 70.8
Cpa.g.sc1441.3 Carica papaya HOM05D004762 ORTHO05D005972 1.1e-42 177.2 119 67.2
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 1.1e-42 177.2 120 69.2
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 1.4e-42 176.8 115 67.0
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 1.4e-42 176.8 116 67.2
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 1.8e-42 176.4 115 67.8
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.8e-42 176.4 119 69.7
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.8e-42 176.4 119 69.7
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 1.8e-42 176.4 117 68.4
Sopen10g028440 Solanum pennellii HOM05D004762 ORTHO05D005972 1.8e-42 176.4 117 68.4
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 3.1e-42 175.6 115 66.1
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 3.1e-42 175.6 115 66.1
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 4.1e-42 175.3 121 63.6
MELO3C018365.2 Cucumis melo HOM05D004762 ORTHO05D005972 4.1e-42 175.3 121 67.8
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 4.1e-42 175.3 119 65.5
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 4.1e-42 175.3 116 66.4
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 5.3e-42 174.9 116 67.2
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 5.3e-42 174.9 120 68.3
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 5.3e-42 174.9 118 72.0
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 5.3e-42 174.9 120 69.2
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 7.0e-42 174.5 115 67.0
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 7.0e-42 174.5 125 64.8
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 7.0e-42 174.5 144 60.4
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 7.0e-42 174.5 121 67.8
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 9.1e-42 174.1 120 66.7
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 9.1e-42 174.1 121 66.9
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 9.1e-42 174.1 117 66.7
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 1.2e-41 173.7 121 67.8
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 1.6e-41 173.3 121 64.5
SGA_v2.0_scaffold44G16679 Striga asiatica HOM05D004762 ORTHO05D005972 1.6e-41 173.3 121 65.3
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 2.6e-41 172.6 116 66.4
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 2.6e-41 172.6 158 54.4
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 3.5e-41 172.2 115 67.0
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 3.5e-41 172.2 119 64.7
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 3.5e-41 172.2 120 68.3
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 3.5e-41 172.2 117 68.4
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 4.5e-41 171.8 123 65.9
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 4.5e-41 171.8 123 65.0
CARHR135230 Cardamine hirsuta HOM05D004762 ORTHO05D005972 5.9e-41 171.4 123 65.0
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 5.9e-41 171.4 115 66.1
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 7.7e-41 171.0 119 69.7
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 7.7e-41 171.0 121 68.6
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 1.0e-40 170.6 115 65.2
PSO017G2836 Papaver somniferum HOM05D004762 ORTHO05D005972 1.0e-40 170.6 119 63.0
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 1.0e-40 170.6 119 63.0
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 1.7e-40 169.9 115 64.3
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 2.2e-40 169.5 116 65.5
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 3.8e-40 168.7 119 68.1
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 5.0e-40 168.3 119 68.1
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 8.5e-40 167.5 90 80.0
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 8.5e-40 167.5 97 74.2
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 8.5e-40 167.5 104 71.2
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 1.5e-39 166.8 121 65.3
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 2.5e-39 166.0 116 62.9
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.5e-39 166.0 116 62.9
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 2.5e-39 166.0 116 64.7
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 3.2e-39 165.6 116 63.8
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 5.5e-39 164.9 116 62.1
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 5.5e-39 164.9 152 55.3
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 7.2e-39 164.5 116 62.1
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 7.2e-39 164.5 116 62.1
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 7.2e-39 164.5 119 67.2
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 2.1e-38 162.9 121 63.6
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 2.1e-38 162.9 89 79.8
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.1e-38 162.9 116 61.2
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 3.6e-38 162.2 116 62.1
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 8.0e-38 161.0 118 58.5
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 1.4e-37 160.2 97 70.1
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 1.4e-37 160.2 121 62.8
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 2.3e-37 159.5 116 63.8
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 6.7e-37 157.9 116 63.8
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 8.8e-37 157.5 119 61.3
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 1.1e-34 150.6 166 47.0
TPR.G10834 Trifolium pratense HOM05D004762 ORTHO05D005972 1.4e-34 150.2 88 75.0
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 1.4e-34 150.2 90 73.3
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 3.8e-32 142.1 201 40.8
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 2.1e-30 136.3 157 49.0
SMO358G0322 Selaginella moellendorffii HOM05D004762 ORTHO05D005972 8.0e-30 134.4 92 66.3
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 3.0e-29 132.5 105 58.1
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 6.8e-29 131.3 102 61.8
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 1.3e-27 127.1 111 55.9
Nitab4.5_0001180g0090 Nicotiana tabacum HOM05D004762 ORTHO05D005972 1.7e-27 126.7 94 60.6
Mapoly0096s0017 Marchantia polymorpha HOM05D004762 ORTHO05D005972 1.1e-26 124.0 124 50.0
Hma1.2p1_0812F.1_g222370 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 3.1e-26 122.5 91 60.4
Aqoxy4G02491 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 4.7e-22 108.6 136 43.4
MCO10G125 Micromonas commoda HOM05D004762 ORTHO05D005972 1.0e-21 107.5 91 56.0
PRCOL_00001728 Prasinoderma coloniale HOM05D004762 ORTHO05D005972 3.8e-16 89.0 96 44.8
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 8.9e-13 77.8 121 31.4
AUR62022908 Chenopodium quinoa HOM05D004762 ORTHO05D005972 7.5e-12 74.7 42 81.0
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 4.1e-10 68.9 116 31.9
BcaC02g12136 Brassica carinata HOM05D004762 ORTHO05D005972 5.4e-10 68.6 113 36.3
GSVIVG01022727001 Vitis vinifera HOM05D004762 ORTHO05D005972 8.6e-08 61.2 51 56.9


User provided reference genes

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