Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 5.4e-128 461.1 242 100.0
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 8.0e-116 420.6 241 91.3
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 7.3e-109 397.5 241 85.5
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 1.7e-102 376.3 242 83.1
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 2.3e-99 365.9 245 79.6
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 2.4e-96 355.9 250 76.8
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 4.1e-96 355.1 245 77.6
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 4.1e-96 355.1 250 80.0
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 5.4e-96 354.8 245 77.6
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 1.2e-92 343.6 251 72.1
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 6.8e-91 337.8 250 72.8
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 6.4e-89 331.3 250 70.8
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 1.9e-88 329.7 243 72.4
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 1.4e-83 313.5 250 66.4
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 1.5e-82 310.1 247 66.8
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 9.9e-82 307.4 248 65.7
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.7e-81 306.6 241 66.8
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 2.2e-81 306.2 248 67.3
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 4.9e-81 305.1 246 66.7
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 3.2e-80 302.4 246 66.3
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 3.2e-80 302.4 247 65.6
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.2e-80 302.0 247 64.8
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.1e-79 299.7 247 64.4
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 3.5e-79 298.9 247 64.4
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 6.0e-79 298.1 232 69.4
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.7e-78 296.6 247 63.6
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.7e-78 296.6 229 69.9
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 2.3e-78 296.2 248 66.1
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 5.1e-78 295.0 234 65.8
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 8.7e-78 294.3 244 64.3
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 1.1e-77 293.9 245 64.9
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 1.1e-77 293.9 247 64.0
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 1.9e-77 293.1 245 63.3
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 1.9e-77 293.1 231 69.3
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 5.6e-77 291.6 229 66.8
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 1.3e-76 290.4 231 67.5
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 3.6e-76 288.9 249 63.1
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 3.6e-76 288.9 248 63.7
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 4.8e-76 288.5 233 66.5
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 6.2e-76 288.1 233 67.0
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 8.1e-76 287.7 229 65.9
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 1.8e-75 286.6 233 65.2
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 3.1e-75 285.8 249 62.2
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 9.0e-75 284.3 246 62.2
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 5.8e-74 281.6 249 61.4
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 1.7e-73 280.0 229 64.6
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 2.2e-73 279.6 233 65.7
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 6.4e-73 278.1 236 66.5
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 2.4e-72 276.2 230 64.3
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 1.6e-71 273.5 236 63.1
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 2.7e-71 272.7 251 58.2
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 2.7e-71 272.7 233 63.1
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.5e-71 272.3 229 61.1
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 3.5e-71 272.3 244 59.8
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 1.0e-70 270.8 223 65.0
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 1.0e-70 270.8 233 63.1
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 1.3e-70 270.4 229 60.7
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 3.0e-70 269.2 226 65.9
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 6.7e-70 268.1 254 56.3
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 1.1e-69 267.3 244 61.5
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.1e-69 267.3 231 64.5
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 1.9e-69 266.5 247 59.1
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 2.5e-69 266.2 222 64.0
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 3.3e-69 265.8 246 60.2
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 4.3e-69 265.4 251 55.8
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 4.3e-69 265.4 245 59.2
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 4.3e-69 265.4 245 59.2
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 5.6e-69 265.0 230 61.7
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 5.6e-69 265.0 252 57.5
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 5.6e-69 265.0 254 56.7
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 7.4e-69 264.6 236 64.0
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 9.6e-69 264.2 254 55.9
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.6e-68 263.5 246 56.9
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 2.1e-68 263.1 233 64.4
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 2.8e-68 262.7 229 62.0
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.7e-68 262.3 236 63.6
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 3.7e-68 262.3 247 60.3
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 3.7e-68 262.3 230 63.5
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 4.8e-68 261.9 254 55.1
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 1.8e-67 260.0 232 59.5
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 2.4e-67 259.6 227 62.1
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 2.4e-67 259.6 236 63.1
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 2.4e-67 259.6 244 60.7
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 6.9e-67 258.1 241 56.8
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 1.5e-66 256.9 235 61.3
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 3.4e-66 255.8 229 61.6
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.3e-65 253.8 220 62.3
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 1.7e-65 253.4 244 54.9
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.9e-65 252.7 220 61.8
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 8.4e-65 251.1 250 55.6
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 4.2e-64 248.8 245 54.7
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 5.5e-64 248.4 248 54.0
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 5.5e-64 248.4 248 54.0
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 7.1e-64 248.1 232 60.8
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.6e-63 246.9 248 56.5
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 2.7e-63 246.1 255 53.3
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 1.0e-62 244.2 236 58.5
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 1.0e-62 244.2 242 57.0
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 2.3e-62 243.0 213 62.4
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.3e-62 243.0 182 67.0
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 3.9e-62 242.3 255 53.3
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 3.7e-60 235.7 236 60.2
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 6.2e-60 235.0 242 56.2
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 1.8e-59 233.4 255 51.8
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 9.3e-56 221.1 248 49.6
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 2.7e-55 219.5 249 49.8
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 3.5e-55 219.2 248 49.2
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 3.5e-55 219.2 248 49.2
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 4.6e-55 218.8 251 49.4
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 3.9e-54 215.7 253 48.6
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 7.4e-53 211.5 189 61.9
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 7.2e-48 194.9 133 75.9
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 2.8e-44 183.0 173 57.2
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 6.9e-43 178.3 198 51.5
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 1.7e-36 157.1 123 62.6
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 3.8e-33 146.0 133 59.4
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 5.2e-30 135.6 227 41.9
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 7.7e-26 121.7 125 58.4
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 1.2e-23 114.4 225 34.2
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 1.6e-23 114.0 247 34.8
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 1.8e-22 110.5 75 73.3
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 5.2e-22 109.0 79 74.7
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 2.0e-18 97.1 123 44.7
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 4.5e-18 95.9 87 55.2
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 1.9e-16 90.5 99 50.5
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 2.5e-16 90.1 62 72.6
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 1.2e-15 87.8 145 44.1
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 1.8e-14 84.0 115 44.3
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 6.1e-07 58.9 71 47.9
PRCOL_00005619 Prasinoderma coloniale HOM05D005854 ORTHO05D333591 4.0e-06 56.2 78 44.9


User provided reference genes

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