Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 8.4e-171 603.6 303 100.0
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 8.4e-171 603.6 303 100.0
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.3e-166 589.7 303 97.0
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 7.9e-161 570.5 303 93.1
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 9.6e-159 563.5 303 91.7
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.6e-153 546.2 301 89.0
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.7e-147 526.2 302 85.1
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.1e-146 523.5 305 85.2
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 7.1e-146 520.8 303 84.8
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 9.3e-146 520.4 303 84.8
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 6.0e-145 517.7 303 84.8
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.0e-145 517.7 303 84.8
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.8e-144 516.2 303 84.5
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 3.9e-144 515.0 303 81.8
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 3.9e-144 515.0 303 81.8
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 5.1e-144 514.6 302 83.1
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 8.7e-144 513.8 303 83.8
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.9e-143 512.7 303 83.2
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.9e-143 512.7 302 83.1
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 2.5e-143 512.3 301 83.7
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.3e-143 511.5 303 83.5
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 4.8e-142 508.1 303 81.8
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 6.3e-142 507.7 302 81.5
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.1e-141 506.9 301 82.4
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.8e-141 506.1 301 82.4
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.8e-141 506.1 301 82.4
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.8e-141 506.1 303 84.2
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.4e-141 505.8 302 82.1
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 2.4e-141 505.8 303 80.2
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.1e-141 505.4 303 81.2
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 2.6e-140 502.3 303 80.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.4e-140 501.9 303 81.8
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.4e-140 501.9 303 81.8
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 3.4e-140 501.9 303 81.2
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 3.4e-140 501.9 303 80.2
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 4.5e-140 501.5 303 79.9
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 5.9e-140 501.1 306 83.3
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.7e-139 499.6 301 81.4
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.2e-139 499.2 303 81.5
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 2.2e-139 499.2 303 80.2
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.2e-139 499.2 306 82.7
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 5.5e-138 494.6 305 82.6
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 7.2e-138 494.2 301 79.4
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 7.2e-138 494.2 300 79.3
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 9.3e-138 493.8 301 80.7
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.6e-137 493.0 303 79.2
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 7.9e-137 490.7 303 78.5
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.8e-136 489.6 303 78.5
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 77.9
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 3.9e-136 488.4 303 78.5
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 6.7e-136 487.6 305 82.3
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.9e-135 486.1 303 77.6
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 2.5e-135 485.7 304 78.0
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 5.7e-135 484.6 303 78.2
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.3e-134 483.4 301 78.7
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.6e-134 483.0 303 78.5
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.2e-134 482.6 300 78.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.8e-134 481.5 301 78.4
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 6.3e-134 481.1 295 78.6
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 1.8e-133 479.6 303 78.9
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 5.3e-133 478.0 304 77.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.2e-132 476.9 303 76.6
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.0e-131 473.8 299 76.9
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.1e-130 470.3 302 76.5
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 7.4e-127 457.6 303 72.9
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 9.7e-127 457.2 300 74.3
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 9.7e-127 457.2 303 73.6
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.3e-126 456.8 300 71.7
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 2.2e-126 456.1 300 74.3
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 8.2e-126 454.1 300 73.3
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 2.4e-125 452.6 300 73.3
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 4.1e-125 451.8 300 72.0
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 1.2e-124 450.3 302 72.8
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 73.3
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 73.3
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 2.0e-124 449.5 300 73.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.0e-124 449.5 293 74.7
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 2.6e-124 449.1 300 72.7
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 3.4e-124 448.7 300 72.0
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 7.7e-124 447.6 300 72.3
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.0e-123 447.2 305 72.8
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.3e-123 446.8 300 74.0
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 5.0e-123 444.9 302 72.2
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 6.5e-123 444.5 302 72.5
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 8.5e-123 444.1 300 71.7
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.1e-122 443.7 300 71.3
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.1e-122 443.7 300 71.3
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.1e-122 443.7 300 71.3
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.1e-121 439.5 287 75.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 2.7e-121 439.1 275 78.5
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 72.3
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 3.0e-120 435.6 306 70.6
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 3.9e-120 435.3 311 69.8
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 5.9e-116 421.4 251 80.9
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.0e-115 420.6 306 69.0
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.3e-115 420.2 303 69.0
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 8.5e-115 417.5 251 80.1
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 9.4e-106 387.5 227 82.4
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.2e-103 380.6 215 84.2
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.5e-103 380.2 299 63.9
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.3e-102 377.1 261 70.9
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.7e-102 375.6 232 77.6
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 6.3e-102 374.8 235 77.4
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 5.4e-101 371.7 303 61.7
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.3e-99 367.1 221 78.7
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.9e-99 365.9 305 60.7
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 1.9e-98 363.2 249 69.9
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.9e-98 363.2 225 76.4
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.6e-95 352.8 255 67.5
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 4.9e-94 348.6 222 77.0
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.2e-89 334.0 277 59.9
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 3.3e-82 309.3 301 55.8
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 4.0e-80 302.4 339 49.9
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 2.7e-76 289.7 173 76.9
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 3.3e-58 229.6 316 42.7
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 3.3e-50 203.0 160 67.5
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.9e-46 189.9 163 58.3
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 1.6e-44 184.1 303 40.3
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 4.3e-42 176.0 343 35.6
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.5e-39 167.5 105 81.9
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 8.4e-38 161.8 177 48.6
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.5e-34 151.0 88 77.3
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 3.1e-32 143.3 91 74.7
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 2.2e-30 137.1 91 75.8
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 2.2e-25 120.6 86 74.4
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 6.3e-25 119.0 72 73.6
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.0e-22 111.7 64 89.1
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.2e-22 110.5 135 47.4
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 5.0e-22 109.4 318 32.4
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 1.2e-15 88.2 46 91.3
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.2e-15 88.2 55 67.3


User provided reference genes

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