Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 1.4e-119 434.5 635 100.0
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 1.2e-94 351.7 490 94.7
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 3.7e-88 330.1 436 88.5
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 2.8e-67 260.8 396 56.3
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 4.2e-63 246.9 408 58.8
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 1.1e-60 238.8 224 76.3
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 2.1e-59 234.6 413 61.3
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 2.0e-57 228.0 220 73.2
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 2.5e-55 221.1 239 69.9
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 6.2e-51 206.5 392 75.0
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 1.8e-50 204.9 392 71.7
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 4.0e-50 203.8 220 68.2
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 9.0e-50 202.6 400 63.5
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 3.4e-49 200.7 389 57.3
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 5.8e-49 199.9 222 67.1
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 5.8e-49 199.9 222 67.1
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 5.8e-49 199.9 222 68.5
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 2.9e-48 197.6 220 70.5
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 8.4e-48 196.1 228 68.9
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 4.2e-47 193.7 391 66.0
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 1.2e-46 192.2 228 68.4
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.7e-46 191.0 222 65.8
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.7e-46 191.0 222 65.8
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 4.6e-46 190.3 220 70.0
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.0e-45 189.1 266 60.9
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 2.3e-45 188.0 396 64.6
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 3.9e-45 187.2 387 73.6
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 5.1e-45 186.8 222 64.9
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 6.7e-45 186.4 393 65.1
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 8.7e-45 186.0 222 62.6
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 1.5e-44 185.3 222 64.0
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 4.3e-44 183.7 393 76.1
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 5.7e-44 183.3 388 64.4
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 7.4e-44 183.0 222 63.5
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 2.8e-43 181.0 396 66.7
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 4.8e-43 180.3 387 72.4
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 1.4e-42 178.7 387 65.6
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 4.1e-42 177.2 222 65.8
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 6.9e-42 176.4 218 67.9
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 1.2e-41 175.6 222 60.8
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 1.2e-41 175.6 220 61.4
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 1.2e-41 175.6 222 60.8
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 1.5e-41 175.3 222 62.6
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 1.5e-41 175.3 220 62.7
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 5.9e-41 173.3 218 65.6
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 7.7e-41 172.9 222 63.5
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 1.3e-40 172.2 222 63.5
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 2.2e-40 171.4 390 65.1
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 3.8e-40 170.6 212 68.4
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 5.0e-40 170.2 220 60.0
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 5.0e-40 170.2 222 63.5
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 6.5e-40 169.9 392 55.1
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 8.5e-40 169.5 222 59.9
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 1.1e-39 169.1 212 67.5
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 1.1e-39 169.1 393 48.1
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 2.5e-39 167.9 222 63.5
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 3.2e-39 167.5 222 59.5
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 3.2e-39 167.5 391 63.7
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 4.2e-39 167.2 220 62.7
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 5.5e-39 166.8 391 43.0
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 9.4e-39 166.0 222 59.5
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 9.4e-39 166.0 392 46.9
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 1.6e-38 165.2 222 64.0
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 2.1e-38 164.9 223 57.4
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 2.7e-38 164.5 392 53.6
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 1.4e-37 162.2 391 66.2
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 1.8e-37 161.8 222 61.3
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 1.8e-37 161.8 392 49.5
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 2.3e-37 161.4 391 31.5
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 3.0e-37 161.0 220 61.4
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 8.8e-37 159.5 225 61.8
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 2.0e-36 158.3 222 59.0
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 2.5e-36 157.9 220 59.1
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 2.5e-36 157.9 224 61.2
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 7.4e-36 156.4 212 66.0
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 7.4e-36 156.4 217 64.1
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 9.7e-36 156.0 395 58.5
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 1.7e-35 155.2 221 59.3
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 2.2e-35 154.8 212 65.1
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 3.7e-35 154.1 222 62.6
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 3.7e-35 154.1 212 65.6
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 3.7e-35 154.1 222 62.6
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 3.7e-35 154.1 212 64.6
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 6.3e-35 153.3 212 65.1
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 2.4e-34 151.4 212 64.6
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 2.4e-34 151.4 223 61.0
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 4.1e-34 150.6 212 64.6
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 3.4e-33 147.5 222 57.7
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 5.9e-33 146.7 221 57.9
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 1.6e-30 138.7 217 62.2
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 4.7e-30 137.1 211 56.9
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 3.9e-29 134.0 397 55.2
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 4.8e-27 127.1 105 57.1
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 2.2e-24 118.2 209 53.6
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 1.4e-23 115.5 109 51.4
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 7.4e-20 103.2 198 58.6
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 2.2e-19 101.7 98 50.0
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 2.2e-19 101.7 232 34.9
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 7.0e-18 96.7 222 50.5
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 2.0e-17 95.1 141 40.4
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 6.8e-13 80.1 222 32.0
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 4.4e-12 77.4 223 30.0
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 1.4e-10 72.4 56 62.5
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 7.7e-09 66.6 59 57.6
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 7.7e-09 66.6 59 57.6
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 5.0e-08 63.9 39 64.1
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 8.5e-08 63.2 38 65.8
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 1.5e-07 62.4 45 64.4
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 3.2e-07 61.2 36 75.0
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 1.2e-06 59.3 32 81.2
BraA05t22010Z Brassica rapa HOM05D006707 ORTHO05D008243 2.7e-06 58.2 39 69.2
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 2.7e-06 58.2 152 26.3
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 2.7e-06 58.2 36 69.4
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 4.7e-06 57.4 36 69.4
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 6.1e-06 57.0 30 80.0


User provided reference genes

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