Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 8.2e-108 393.7 189 100.0
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 3.2e-88 328.6 180 89.4
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 1.2e-82 310.1 186 79.0
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 2.9e-81 305.4 186 76.3
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 3.8e-81 305.1 186 76.9
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 1.9e-80 302.8 187 75.9
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 3.3e-80 302.0 186 76.3
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 4.9e-76 288.1 186 72.0
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 4.9e-76 288.1 186 72.0
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 1.1e-75 287.0 186 73.1
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 5.0e-73 278.1 186 71.0
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 2.8e-71 272.3 186 66.7
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 3.6e-71 271.9 186 68.3
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 8.9e-70 267.3 180 71.1
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 2.2e-68 262.7 186 66.1
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 6.4e-68 261.2 186 66.7
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 1.9e-67 259.6 186 64.5
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 4.1e-67 258.5 186 62.9
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 9.2e-67 257.3 186 65.6
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 2.0e-66 256.1 186 65.1
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 7.8e-66 254.2 186 64.0
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 1.0e-65 253.8 186 62.9
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 1.0e-65 253.8 186 62.9
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 1.0e-65 253.8 186 64.5
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 1.3e-65 253.4 186 64.0
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 1.7e-65 253.1 186 64.0
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 1.7e-65 253.1 186 63.4
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 2.3e-65 252.7 204 60.3
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 5.0e-65 251.5 180 66.7
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 8.6e-65 250.8 186 65.1
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 1.9e-64 249.6 186 61.8
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 2.5e-64 249.2 186 61.3
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 2.5e-64 249.2 186 61.3
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 2.5e-64 249.2 186 62.4
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 5.6e-64 248.1 188 62.8
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 5.6e-64 248.1 186 63.4
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 7.3e-64 247.7 186 62.4
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 7.3e-64 247.7 186 62.9
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 1.2e-63 246.9 186 60.8
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.2e-63 246.9 186 61.3
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.2e-63 246.9 186 61.3
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 2.1e-63 246.1 186 60.8
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 2.8e-63 245.7 186 60.8
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 1.1e-62 243.8 186 59.7
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 1.4e-62 243.4 201 58.2
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 1.4e-62 243.4 187 62.6
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 1.8e-62 243.0 186 60.2
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.8e-62 243.0 186 60.8
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 1.8e-62 243.0 186 60.2
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 2.3e-62 242.7 186 60.8
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 3.1e-62 242.3 186 61.3
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 4.0e-62 241.9 186 58.6
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 5.2e-62 241.5 177 64.4
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 5.2e-62 241.5 186 61.3
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 6.8e-62 241.1 186 60.2
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 8.9e-62 240.7 186 59.1
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 1.2e-61 240.4 186 59.7
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 2.6e-61 239.2 186 58.1
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 3.4e-61 238.8 186 58.6
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 4.4e-61 238.4 187 59.4
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 7.5e-61 237.7 193 58.5
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 1.7e-60 236.5 189 58.7
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 2.9e-60 235.7 180 63.3
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 2.9e-60 235.7 213 53.5
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 8.3e-60 234.2 186 57.5
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 8.3e-60 234.2 187 58.3
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 1.1e-59 233.8 186 56.5
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 2.4e-59 232.6 186 57.5
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.2e-59 232.3 186 58.6
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 3.2e-59 232.3 204 55.4
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 4.1e-59 231.9 186 58.6
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 1.2e-58 230.3 186 57.0
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.6e-58 229.9 186 59.1
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.1e-58 229.6 186 58.1
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 2.7e-58 229.2 199 55.3
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 3.0e-57 225.7 187 55.6
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 3.0e-57 225.7 187 55.1
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 3.0e-57 225.7 188 54.8
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 5.1e-57 224.9 186 56.5
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 1.5e-56 223.4 188 55.9
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 3.3e-56 222.2 187 55.6
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 3.3e-56 222.2 192 54.2
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 4.3e-56 221.9 186 54.8
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 9.5e-56 220.7 192 53.1
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 9.5e-56 220.7 192 53.1
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 1.2e-55 220.3 191 55.0
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 2.8e-55 219.2 191 54.5
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 3.6e-55 218.8 152 67.1
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 3.6e-55 218.8 185 54.6
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 1.4e-54 216.9 188 53.7
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 2.3e-54 216.1 186 56.5
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 2.3e-54 216.1 187 52.9
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 5.2e-54 214.9 187 52.9
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 8.9e-54 214.2 187 52.9
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 2.0e-53 213.0 179 55.3
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 5.8e-53 211.5 186 54.8
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 1.1e-51 207.2 186 54.8
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 3.9e-49 198.7 188 49.5
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 2.1e-47 193.0 174 53.4
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 5.8e-45 184.9 177 51.4
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 4.9e-44 181.8 151 57.0
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 3.2e-43 179.1 150 58.7
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 9.2e-43 177.6 187 49.7
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 2.5e-40 169.5 186 41.9
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.6e-39 166.8 116 66.4
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.4e-38 163.7 186 42.5
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 3.1e-38 162.5 189 44.4
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 6.9e-38 161.4 187 41.7
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 2.3e-33 146.4 73 95.9
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 9.0e-30 134.4 183 41.5
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 9.9e-29 131.0 186 35.5
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 3.5e-26 122.5 128 50.0
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 9.6e-24 114.4 109 50.5
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 2.0e-21 106.7 149 38.9
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 2.6e-21 106.3 71 62.0
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 4.2e-11 72.4 50 64.0
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 2.1e-10 70.1 63 50.8
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 2.7e-10 69.7 60 60.0
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 6.7e-09 65.1 53 54.7
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 2.4e-06 56.6 165 27.9


User provided reference genes

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