Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G077600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.4e-190 667.9 371 100.0
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.2e-57 228.0 461 42.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.0e-57 227.3 476 36.1
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.3e-56 224.6 444 44.8
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 6.4e-56 222.2 384 40.1
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.5e-47 192.6 304 41.1
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 1.2e-33 148.3 332 29.8
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.1e-31 141.7 267 36.0
Phvul.011G161300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.8e-29 134.4 227 55.9
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.7e-29 132.5 292 30.8
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-28 131.7 239 33.9
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.2e-27 127.5 290 31.0
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.8e-26 124.4 234 33.3
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-25 121.3 239 32.6
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.6e-25 120.6 148 43.9
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.2e-23 113.2 149 40.9
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 3.6e-22 110.2 279 31.9
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.3e-20 103.6 191 33.5
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 3.3e-20 103.6 157 38.2
Phvul.011G159900 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.7e-20 102.8 139 49.6
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-19 101.7 164 39.6
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 3.1e-18 97.1 164 37.8
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 4.1e-18 96.7 150 40.0
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 4.1e-18 96.7 286 24.8
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-17 94.7 218 32.1
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 5.9e-17 92.8 97 47.4
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-16 92.0 186 33.3
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 2.2e-16 90.9 139 37.4
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 1.1e-15 88.6 285 25.6
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 1.1e-15 88.6 136 37.5
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.1e-15 88.6 144 38.2
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 1.2e-14 85.1 269 26.0
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 1.2e-14 85.1 113 41.6
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.1e-14 84.3 106 42.5
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.1e-14 84.3 142 38.0
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 6.1e-14 82.8 154 33.1
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 6.1e-14 82.8 142 40.1
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 7.9e-14 82.4 105 40.0
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.0e-13 80.5 161 34.8
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 5.2e-13 79.7 147 37.4
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 6.7e-13 79.3 150 32.7
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.7e-13 79.3 92 43.5
Peaxi162Scf02065g00005 Petunia axillaris HOM05D002954 ORTHO05D010308 6.7e-13 79.3 185 34.1
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-12 78.2 158 32.3
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-12 77.8 75 50.7
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 2.6e-12 77.4 156 32.1
arahy.Tifrunner.gnm1.ann1.FX9Q6E Arachis hypogaea HOM05D002954 ORTHO05D003353 3.3e-12 77.0 146 33.6
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 4.4e-12 76.6 101 41.6
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 5.7e-12 76.3 144 34.7
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 9.7e-12 75.5 111 34.2
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.7e-12 75.5 125 37.6
arahy.Tifrunner.gnm1.ann1.KMI722 Arachis hypogaea HOM05D009662 ORTHO05D003353 2.2e-11 74.3 255 28.2
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.7e-11 73.6 139 35.3
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.7e-11 73.6 82 43.9
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.8e-11 73.2 110 39.1
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 4.8e-11 73.2 101 37.6
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-10 72.0 126 34.9
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-10 72.0 126 34.9
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-10 71.6 60 50.0
Peaxi162Scf00005g00443 Petunia axillaris HOM05D002954 ORTHO05D003353 1.4e-10 71.6 155 31.6
Phvul.010G088300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.4e-10 70.9 58 67.2
Sopen01g012120 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-10 70.5 88 40.9
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 4.1e-10 70.1 127 35.4
Sopen04g020530 Solanum pennellii HOM05D002954 ORTHO05D003353 5.3e-10 69.7 98 40.8
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 5.3e-10 69.7 160 30.6
Nitab4.5_0006167g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.1e-10 68.9 92 42.4
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.6e-09 68.2 126 30.2
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 2.0e-09 67.8 121 34.7
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 4.5e-09 66.6 126 33.3
arahy.Tifrunner.gnm1.ann1.T3L04J Arachis hypogaea HOM05D009662 ORTHO05D003353 5.9e-09 66.2 98 39.8
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 5.9e-09 66.2 156 31.4
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 1.0e-08 65.5 46 65.2
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-08 65.5 78 43.6
arahy.Tifrunner.gnm1.ann1.7BWK8H Arachis hypogaea HOM05D009662 ORTHO05D003353 1.7e-08 64.7 170 28.2
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.7e-08 64.7 200 27.5
Nitab4.5_0003410g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-08 64.7 97 40.2
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 2.2e-08 64.3 286 21.3
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 2.2e-08 64.3 119 32.8
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 2.9e-08 63.9 139 33.8
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.9e-08 63.9 118 34.7
Phvul.003G046001 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 6.5e-08 62.8 138 37.0
Nitab4.5_0003952g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-07 62.0 167 32.3
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 1.9e-07 61.2 137 29.2
Ca_12697_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 2.5e-07 60.8 151 25.8
TPR.G22956 Trifolium pratense HOM05D013784 ORTHO05D003353 2.5e-07 60.8 45 57.8
Phvul.003G092300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.2e-07 60.5 63 52.4
Nitab4.5_0002100g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.5e-07 59.7 73 42.5
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 5.5e-07 59.7 145 29.0
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 7.2e-07 59.3 139 29.5
Peaxi162Scf00116g00003 Petunia axillaris HOM05D009128 ORTHO05D011389 7.2e-07 59.3 167 26.3
Peaxi162Scf00238g00610 Petunia axillaris HOM05D009128 ORTHO05D011389 7.2e-07 59.3 167 26.3
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.6e-06 58.2 139 29.5
Ca_14618_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.1e-06 57.8 133 31.6
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 2.7e-06 57.4 176 28.4
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.6e-06 57.0 128 28.1
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 3.6e-06 57.0 65 49.2
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.6e-06 57.0 97 37.1
Psat5g088160 Pisum sativum HOM05D002954 ORTHO05D003353 3.6e-06 57.0 87 31.0
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 4.7e-06 56.6 139 28.8
Peaxi162Scf00168g00125 Petunia axillaris HOM05D002954 ORTHO05D003353 4.7e-06 56.6 186 26.9


User provided reference genes

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