Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 4.8e-213 744.2 363 100.0
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 6.2e-205 717.2 359 96.9
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 1.9e-201 705.7 359 95.0
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.3e-197 693.0 359 93.6
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 2.8e-197 691.8 359 92.8
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 1.2e-192 676.4 359 90.0
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 3.5e-192 674.9 359 88.6
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 3.7e-189 664.8 363 87.6
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.6e-187 658.7 359 87.5
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.4e-187 658.3 359 87.7
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 4.5e-187 657.9 359 88.0
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 5.9e-187 657.5 359 87.2
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 7.6e-187 657.1 398 81.2
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 2.9e-186 655.2 359 86.9
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 6.5e-186 654.1 359 86.9
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.5e-186 653.7 359 87.5
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.5e-185 652.1 359 87.2
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 3.2e-185 651.7 360 88.1
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 4.2e-185 651.4 359 86.4
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 2.1e-184 649.0 359 86.1
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 1.0e-183 646.7 363 85.1
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 1.3e-183 646.4 358 86.9
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.8e-183 646.0 363 84.6
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 3.0e-183 645.2 359 86.1
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 3.0e-183 645.2 363 85.7
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 3.3e-182 641.7 362 84.8
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.3e-182 641.3 359 84.7
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.3e-181 639.8 374 82.6
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.7e-181 639.4 359 84.4
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.7e-181 639.4 359 84.4
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.7e-181 639.4 359 85.5
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 2.8e-181 638.6 359 85.8
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.8e-181 638.6 359 85.8
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.8e-181 638.6 363 84.6
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.8e-181 638.6 363 84.6
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 4.8e-181 637.9 359 85.8
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 6.3e-181 637.5 359 85.5
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 1.1e-180 636.7 359 85.8
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.8e-180 636.0 366 84.4
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 5.3e-180 634.4 359 85.2
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 6.9e-180 634.0 359 85.5
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 6.9e-180 634.0 359 85.0
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.2e-179 633.3 359 85.2
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.6e-179 632.1 359 85.0
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 3.4e-179 631.7 360 84.7
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 1.3e-178 629.8 362 84.5
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.7e-178 629.4 360 84.2
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 5.0e-178 627.9 363 82.9
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 6.5e-178 627.5 360 84.2
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 2.5e-177 625.5 360 83.1
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 4.2e-177 624.8 360 83.6
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 7.2e-177 624.0 359 82.7
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 9.4e-177 623.6 350 85.7
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 1.2e-176 623.2 359 83.6
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 1.2e-176 623.2 360 82.8
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 4.6e-176 621.3 360 83.6
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 7.9e-176 620.5 361 84.2
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.0e-175 620.2 359 82.7
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 1.0e-175 620.2 359 83.8
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 1.8e-175 619.4 359 82.5
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 2.3e-175 619.0 359 83.3
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 3.0e-175 618.6 359 82.2
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 8.8e-175 617.1 361 82.5
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.1e-174 616.7 359 82.2
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.1e-174 616.7 359 80.5
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 1.1e-174 616.7 359 83.8
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 1.5e-174 616.3 359 81.9
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.0e-174 615.9 360 81.7
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 2.0e-174 615.9 360 83.1
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 2.0e-174 615.9 360 81.9
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 3.3e-174 615.1 348 85.3
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 3.3e-174 615.1 340 86.2
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 4.4e-174 614.8 360 82.8
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 5.7e-174 614.4 362 82.0
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 7.4e-174 614.0 360 82.8
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 7.4e-174 614.0 360 82.5
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 7.4e-174 614.0 359 83.0
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 9.7e-174 613.6 359 83.6
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.3e-173 613.2 359 83.0
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 2.2e-173 612.5 360 82.2
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 2.8e-173 612.1 362 81.8
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 3.7e-173 611.7 358 81.6
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 3.7e-173 611.7 386 78.8
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 6.3e-173 610.9 360 82.2
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 2.4e-172 609.0 359 82.2
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.4e-172 609.0 362 81.2
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 5.3e-172 607.8 359 80.8
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 6.9e-172 607.4 364 80.5
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 4.5e-171 604.7 362 81.2
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 5.9e-171 604.4 362 81.5
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 7.7e-171 604.0 364 79.9
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 7.7e-171 604.0 364 79.9
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 7.7e-171 604.0 364 79.9
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 7.7e-171 604.0 364 79.9
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 7.7e-171 604.0 364 79.9
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.2e-170 602.4 361 80.6
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.8e-170 601.7 373 79.9
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 6.5e-170 600.9 340 85.3
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.2e-169 597.4 362 81.2
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.2e-168 596.7 391 76.0
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.6e-168 596.3 360 79.4
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.1e-168 595.9 361 81.7
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 1.1e-166 590.1 362 81.2
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.3e-166 588.6 358 80.2
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 4.4e-166 588.2 340 83.5
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.3e-165 586.6 339 83.2
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.2e-165 585.9 359 77.2
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 8.2e-165 583.9 359 76.3
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 5.3e-164 581.3 358 78.8
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 9.1e-164 580.5 359 78.3
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 1.2e-163 580.1 356 79.8
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 1.7e-162 576.2 358 79.3
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 3.8e-162 575.1 358 77.9
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.5e-161 573.2 357 78.7
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.5e-161 572.4 360 80.0
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.5e-161 572.4 359 77.7
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 7.2e-161 570.9 359 79.1
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 2.1e-160 569.3 361 77.6
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 3.6e-160 568.5 361 76.5
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 4.7e-160 568.2 359 79.4
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 6.1e-160 567.8 359 76.3
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 8.0e-160 567.4 366 75.1
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 8.8e-159 563.9 354 75.1
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 8.8e-159 563.9 357 73.9
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 2.6e-158 562.4 357 73.9
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 7.5e-158 560.8 423 68.1
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.7e-157 559.7 357 75.9
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.8e-156 556.2 360 74.4
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.0e-156 554.3 340 79.4
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 5.9e-155 551.2 360 73.1
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 5.9e-155 551.2 360 74.2
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 5.0e-154 548.1 360 75.0
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 1.1e-153 547.0 360 75.0
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.6e-152 542.0 358 73.7
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 4.4e-150 535.0 360 73.6
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.7e-146 523.1 363 72.5
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 5.0e-146 521.5 350 70.9
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 9.5e-145 517.3 355 72.1
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 2.8e-144 515.8 386 70.5
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.4e-143 513.5 359 66.9
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 2.0e-142 509.6 359 66.3
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 7.5e-142 507.7 359 67.4
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 4.9e-141 505.0 360 66.7
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.6e-139 500.0 359 65.5
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 7.8e-139 497.7 362 66.0
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 3.0e-135 485.7 361 64.5
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 4.4e-134 481.9 348 71.3
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 5.8e-134 481.5 288 81.2
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.7e-133 479.9 283 81.3
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.7e-133 478.8 325 72.3
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 1.3e-130 470.3 358 65.1
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 8.6e-130 467.6 361 62.6
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 1.2e-128 463.8 277 81.6
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.1e-127 459.1 272 80.5
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.7e-125 453.4 327 69.4
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 2.2e-125 453.0 268 80.6
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 7.0e-124 448.0 270 81.5
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 4.6e-123 445.3 268 81.0
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 6.2e-120 434.9 379 56.7
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 1.4e-119 433.7 275 79.6
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 5.4e-116 421.8 356 56.2
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.0e-114 417.5 288 70.8
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 1.0e-114 417.5 239 84.1
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 2.0e-110 403.3 395 52.2
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 2.6e-110 402.9 269 71.4
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 6.0e-107 391.7 359 53.8
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.8e-90 337.0 200 81.5
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 4.3e-89 332.4 273 64.5
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 2.4e-87 326.6 177 88.1
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 6.4e-85 318.5 187 82.9
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.4e-84 316.6 197 77.7
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 1.4e-66 257.7 160 78.8
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 1.0e-53 214.9 268 50.7
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 2.6e-49 200.3 363 32.8
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.6e-46 191.0 113 85.8
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.2e-38 164.9 147 59.9
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 5.9e-38 162.5 119 65.5
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 7.7e-38 162.2 388 25.3
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.5e-36 157.9 119 63.9
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 2.3e-34 150.6 296 29.7
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 4.4e-33 146.4 302 30.5
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 9.8e-33 145.2 115 62.6
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.5e-25 121.3 73 74.0
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 7.3e-12 75.9 100 49.0
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 9.8e-09 65.5 68 52.9


User provided reference genes

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