Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G173300 Phaseolus vulgaris HOM05D010129 ORTHO05D008996 7.2e-107 390.6 197 100.0
VMungo1309G3046 Vigna mungo HOM05D015604 ORTHO05D008996 2.7e-69 265.8 181 79.0
Glyma.04G188600 Glycine max HOM05D010129 ORTHO05D008996 3.4e-56 222.2 209 65.6
Glyma.06G177000 Glycine max HOM05D010129 ORTHO05D008996 1.1e-51 207.2 169 69.8
Lj1g0001041 Lotus japonicus HOM05D010129 ORTHO05D008996 1.0e-47 194.1 204 54.9
Lj4g0006123 Lotus japonicus HOM05D000885 ORTHO05D008996 1.4e-38 163.7 207 46.9
Phvul.003G205500 Phaseolus vulgaris HOM05D000885 ORTHO05D008996 1.9e-38 163.3 205 46.3
Cfa019224 Carpinus fangiana HOM05D000885 ORTHO05D008996 1.8e-36 156.8 207 44.0
Lalb_Chr12g0201911 Lupinus albus HOM05D000885 ORTHO05D008996 1.8e-36 156.8 205 46.8
Medtr4g104770 Medicago truncatula HOM05D000885 ORTHO05D008996 1.8e-36 156.8 201 48.3
Ca_19418_v3 Cicer arietinum L. HOM05D000885 ORTHO05D008996 4.3e-35 152.1 202 49.0
Glyma.17G124400 Glycine max HOM05D000885 ORTHO05D008996 1.4e-33 147.1 204 44.6
Lalb_Chr07g0182991 Lupinus albus HOM05D000885 ORTHO05D008996 3.1e-33 146.0 204 46.6
TPR.G37502 Trifolium pratense HOM05D000885 ORTHO05D008996 4.1e-33 145.6 205 44.4
VMungo1215G0788 Vigna mungo HOM05D000885 ORTHO05D008996 1.0e-31 141.0 193 44.0
CiPaw.11G019200 Carya illinoinensis HOM05D000885 ORTHO05D008996 3.2e-30 136.0 204 39.7
QL10p006845 Quercus lobata HOM05D000885 ORTHO05D008996 9.4e-30 134.4 211 40.3
Haze_07592 Corylus avellana HOM05D000885 ORTHO05D008996 1.6e-29 133.7 197 42.6
Ca_16126_v3 Cicer arietinum L. HOM05D010129 ORTHO05D013305 7.9e-29 131.3 179 44.7
Ca_30303_v3 Cicer arietinum L. HOM05D010129 ORTHO05D013305 7.9e-29 131.3 179 44.7
MD06G1165500 Malus domestica HOM05D000885 ORTHO05D008996 1.8e-28 130.2 207 41.5
Atru.chr9.2584 Acer truncatum HOM05D000885 ORTHO05D008996 2.5e-27 126.3 213 40.4
Psat4g060640 Pisum sativum HOM05D000885 ORTHO05D008996 4.3e-27 125.6 205 42.4
CiPaw.12G031400 Carya illinoinensis HOM05D000885 ORTHO05D008996 7.4e-27 124.8 208 39.9
CANSAT80G2717 Cannabis sativa HOM05D000885 ORTHO05D008996 9.7e-27 124.4 203 40.9
MD14G1171000 Malus domestica HOM05D000885 ORTHO05D008996 2.8e-26 122.9 207 41.1
RcHm_v2.0_Chr7g0192501 Rosa chinensis HOM05D000885 ORTHO05D008996 2.4e-25 119.8 206 40.3
FvH4_5g06340 Fragaria vesca HOM05D000885 ORTHO05D008996 6.9e-25 118.2 203 41.9
FAN13G1050 Fragaria x ananassa HOM05D000885 ORTHO05D008996 6.9e-25 118.2 203 41.9
FAN18G0237 Fragaria x ananassa HOM05D000885 ORTHO05D008996 6.9e-25 118.2 203 41.9
Dinv38523 Davidia involucrata HOM05D000885 ORTHO05D008996 9.1e-25 117.9 214 37.4
FAN08G3554 Fragaria x ananassa HOM05D000885 ORTHO05D008996 9.1e-25 117.9 203 41.9
Manes.06G110900 Manihot esculenta HOM05D000885 ORTHO05D008996 1.2e-24 117.5 212 37.7
FAN04G1252 Fragaria x ananassa HOM05D000885 ORTHO05D008996 1.5e-24 117.1 203 40.4
Eucgr.K02787 Eucalyptus grandis HOM05D000885 ORTHO05D008996 1.7e-23 113.6 213 36.2
Potri.012G086500 Populus trichocarpa HOM05D000885 ORTHO05D008996 1.7e-23 113.6 211 37.9
Dinv20596 Davidia involucrata HOM05D000885 ORTHO05D008996 3.8e-23 112.5 219 37.9
Hma1.2p1_1092F.1_g255950 Hydrangea macrophylla HOM05D000885 ORTHO05D008996 1.4e-22 110.5 219 37.9
Aqoxy3G01240 Aquilegia oxysepala HOM05D000885 ORTHO05D008996 2.5e-22 109.8 215 35.8
Prupe.5G165100 Prunus persica HOM05D000885 ORTHO05D008996 2.5e-22 109.8 180 40.6
Glyma.06G177200 Glycine max HOM05D010129 ORTHO05D008996 3.2e-22 109.4 176 45.5
TAR629G0635 Trochodendron aralioides HOM05D000885 ORTHO05D008996 4.2e-22 109.0 216 35.2
Actinidia19363 Actinidia chinensis HOM05D000885 ORTHO05D008996 5.5e-22 108.6 219 36.1
Cpa.g.sc159.15 Carica papaya HOM05D000885 ORTHO05D008996 5.5e-22 108.6 213 33.8
TWI14G0880 Tripterygium wilfordii HOM05D000885 ORTHO05D008996 5.5e-22 108.6 210 38.6
GSVIVG01007639001 Vitis vinifera HOM05D000885 ORTHO05D008996 9.4e-22 107.8 200 37.0
Ciclev10022143m.g Citrus clementina HOM05D000885 ORTHO05D008996 3.6e-21 105.9 176 39.2
TAR371G0994 Trochodendron aralioides HOM05D000885 ORTHO05D008996 3.6e-21 105.9 216 35.2
Cc00_g26390 Coffea canephora HOM05D000885 ORTHO05D008996 4.7e-21 105.5 215 33.5
Nn4g22584 Nelumbo nucifera HOM05D000885 ORTHO05D008996 6.1e-21 105.1 215 34.0
Manes.14G060400 Manihot esculenta HOM05D000885 ORTHO05D008996 1.8e-20 103.6 210 38.1
Glyma.05G041800 Glycine max HOM05D010129 ORTHO05D008996 6.7e-20 101.7 129 48.8
Actinidia16220 Actinidia chinensis HOM05D000885 ORTHO05D008996 2.0e-19 100.1 186 36.6
PSO063G6095 Papaver somniferum HOM05D000885 ORTHO05D008996 4.4e-19 99.0 219 34.2
HanXRQChr10g0296021 Helianthus annuus HOM05D000885 ORTHO05D008996 1.3e-18 97.4 202 39.1
Thecc.03G026300 Theobroma cacao HOM05D000885 ORTHO05D008996 1.7e-18 97.1 230 32.6
CSS0019047 Camellia sinensis var. sinensis HOM05D000885 ORTHO05D008996 2.8e-18 96.3 178 38.8
DCAR_026175 Daucus carota HOM05D000885 ORTHO05D008996 2.8e-18 96.3 217 30.4
MSTRG.11498 Avicennia marina HOM05D000885 ORTHO05D008996 6.3e-18 95.1 216 33.8
Lj9C442T3 Lonicera japonica HOM05D000885 ORTHO05D008996 8.2e-18 94.7 219 34.2
Peaxi162Scf00763g00438 Petunia axillaris HOM05D000885 ORTHO05D008996 1.1e-17 94.4 217 34.1
Nn3g16685 Nelumbo nucifera HOM05D006734 ORTHO05D008580 3.1e-17 92.8 166 36.1
Nitab4.5_0008713g0010 Nicotiana tabacum HOM05D000885 ORTHO05D008996 3.1e-17 92.8 216 34.7
Nitab4.5_0000003g0830 Nicotiana tabacum HOM05D000885 ORTHO05D008996 5.3e-17 92.0 217 33.6
vmacro19293 Vaccinium macrocarpon HOM05D000885 ORTHO05D008996 5.3e-17 92.0 178 37.1
Hund02789 Selenicereus undatus HOM05D000885 ORTHO05D008996 7.0e-17 91.7 212 33.5
TAR622G0608 Trochodendron aralioides HOM05D000885 ORTHO05D008996 9.1e-17 91.3 216 36.1
ECA232G2046 Erigeron canadensis HOM05D000885 ORTHO05D008996 4.5e-16 89.0 203 34.5
Solyc03g112160.3 Solanum lycopersicum HOM05D000885 ORTHO05D008996 5.9e-16 88.6 217 31.8
Rhsim08G0178100 Rhododendron simsii HOM05D000885 ORTHO05D008996 7.7e-16 88.2 237 30.0
PGSC0003DMG400018127 Solanum tuberosum HOM05D000885 ORTHO05D008996 1.7e-15 87.0 218 32.1
Oeu020883.2 Olea europaea HOM05D000885 ORTHO05D008996 6.5e-15 85.1 154 35.1
Sabra12G0061900 Salix brachista HOM05D000885 ORTHO05D008996 6.5e-15 85.1 191 33.5
Nitab4.5_0002522g0010 Nicotiana tabacum HOM05D000885 ORTHO05D008996 8.5e-15 84.7 189 30.7
Oeu036500.2 Olea europaea HOM05D000885 ORTHO05D008996 1.1e-14 84.3 174 33.3
EL10Ac5g10650 Beta vulgaris HOM05D000885 ORTHO05D008996 1.5e-14 84.0 209 33.0
PSO754G0088 Papaver somniferum HOM05D000885 ORTHO05D008996 1.9e-14 83.6 198 34.3
Medtr3g076880 Medicago truncatula HOM05D010129 ORTHO05D013305 2.5e-14 83.2 184 35.9
SalBow5G1579 Salvia bowleyana HOM05D000885 ORTHO05D008996 5.5e-14 82.0 210 34.3
Sed0003121 Sechium edule HOM05D000885 ORTHO05D008996 7.2e-14 81.6 200 28.0
Migut.O00162 Erythranthe guttata HOM05D000885 ORTHO05D008996 9.4e-14 81.3 215 32.1
Nitab4.5_0008913g0040 Nicotiana tabacum HOM05D000885 ORTHO05D008996 9.4e-14 81.3 190 30.0
Lsat_1_v5_gn_4_77360 Lactuca sativa HOM05D000885 ORTHO05D008996 2.1e-13 80.1 209 33.5
SGA_v2.0_scaffold25G10795 Striga asiatica HOM05D000885 ORTHO05D008996 3.6e-13 79.3 148 33.1
HanXRQChr16g0504731 Helianthus annuus HOM05D000885 ORTHO05D008996 4.7e-13 79.0 200 31.5
CAN.G993.19 Capsicum annuum HOM05D000885 ORTHO05D008996 6.1e-13 78.6 215 28.8
Duzib205G1010 Durio zibethinus HOM05D000885 ORTHO05D008996 2.3e-12 76.6 209 32.5
PGSC0003DMG400027072 Solanum tuberosum HOM05D000885 ORTHO05D008996 2.3e-12 76.6 215 30.7
AUR62028721 Chenopodium quinoa HOM05D000885 ORTHO05D008996 3.9e-12 75.9 207 30.9
Sc10g0010220 Simmondsia chinensis HOM05D000885 ORTHO05D008996 1.1e-11 74.3 202 29.7
Sopen06g028070 Solanum pennellii HOM05D000885 ORTHO05D008996 1.1e-11 74.3 215 30.2
arahy.Tifrunner.gnm1.ann1.AK3NNE Arachis hypogaea HOM05D067848 ORTHO05D038856 3.3e-11 72.8 182 35.2
AUR62008139 Chenopodium quinoa HOM05D000885 ORTHO05D008996 3.3e-11 72.8 210 31.0
CAN.G338.44 Capsicum annuum HOM05D000885 ORTHO05D008996 7.4e-11 71.6 214 29.0
Phvul.009G173600 Phaseolus vulgaris HOM05D015604 ORTHO05D050264 2.2e-10 70.1 67 61.2
Solyc06g071780.4 Solanum lycopersicum HOM05D000885 ORTHO05D008996 2.8e-10 69.7 219 30.6
Hma1.2p1_0494F.1_g165570 Hydrangea macrophylla HOM05D000885 ORTHO05D001238 4.1e-09 65.9 223 27.8
MBI10_g11212_MAGBIO Magnolia biondii HOM05D000885 ORTHO05D008996 4.1e-09 65.9 197 27.4
Aqoxy2G02848_Aqoxy2G02849 Aquilegia oxysepala HOM05D000885 ORTHO05D001238 7.0e-09 65.1 215 27.9
MD02G1231100 Malus domestica HOM05D000885 ORTHO05D008996 1.2e-08 64.3 117 39.3
Medtr2g028420 Medicago truncatula HOM05D010129 ORTHO05D013305 1.2e-08 64.3 176 33.0
Medtr3g076670 Medicago truncatula HOM05D010129 ORTHO05D013305 1.6e-08 63.9 178 31.5
THA.LOC104809243 Tarenaya hassleriana HOM05D000885 ORTHO05D008996 2.6e-08 63.2 201 28.9
MBI19_g38158_MAGBIO Magnolia biondii HOM05D000885 ORTHO05D001238 7.7e-08 61.6 203 28.6
Os05g0107900 Oryza sativa ssp. japonica HOM05D000885 ORTHO05D008996 7.7e-08 61.6 178 29.2
Migut.G00113 Erythranthe guttata HOM05D000885 ORTHO05D001238 1.0e-07 61.2 197 28.9
Medtr3g076720 Medicago truncatula HOM05D010129 ORTHO05D013305 1.3e-07 60.8 109 35.8
SEGI_02896 Sequoiadendron giganteum HOM05D000885 ORTHO05D001238 1.3e-07 60.8 205 27.8
Psat5g118320 Pisum sativum HOM05D020197 ORTHO05D013305 5.0e-07 58.9 171 32.2
arahy.Tifrunner.gnm1.ann1.C5RG8M Arachis hypogaea HOM05D067848 ORTHO05D038856 1.9e-06 57.0 182 32.4
Phvul.009G173500 Phaseolus vulgaris HOM05D015604 ORTHO05D037325 2.5e-06 56.6 68 51.5
VMungo1309G0259 Vigna mungo HOM05D015604 ORTHO05D037325 2.5e-06 56.6 58 56.9
AUR62016157 Chenopodium quinoa HOM05D000885 ORTHO05D001238 3.2e-06 56.2 207 26.6
ECA246G5104 Erigeron canadensis HOM05D000885 ORTHO05D001238 3.2e-06 56.2 216 26.4
TPR.G30840 Trifolium pratense HOM05D010129 ORTHO05D013305 3.2e-06 56.2 171 28.7
CsaV3_6G022620 Cucumis sativus L. HOM05D000885 ORTHO05D001238 4.2e-06 55.8 187 25.7
Sc13g0006260 Simmondsia chinensis HOM05D000885 ORTHO05D001238 5.5e-06 55.5 188 26.6
Peaxi162Scf00089g01332 Petunia axillaris HOM05D000885 ORTHO05D008996 7.2e-06 55.1 142 29.6
Sed0024648 Sechium edule HOM05D000885 ORTHO05D001238 7.2e-06 55.1 183 25.1
Medtr1215s0010 Medicago truncatula HOM05D010129 ORTHO05D013305 9.4e-06 54.7 112 33.0


User provided reference genes

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