Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 3.6e-73 278.1 134 100.0
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 2.0e-63 245.7 126 90.5
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 1.0e-59 233.4 119 90.8
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 6.5e-59 230.7 122 86.9
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 1.1e-58 229.9 133 81.2
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 1.5e-58 229.6 129 81.4
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 1.9e-58 229.2 114 91.2
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 9.4e-58 226.9 135 78.5
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 8.0e-57 223.8 133 76.7
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 2.3e-56 222.2 134 76.9
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 2.3e-56 222.2 134 76.9
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 5.2e-56 221.1 133 78.9
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 1.5e-55 219.5 121 81.8
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.6e-55 218.8 130 77.7
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 1.8e-53 212.6 132 73.5
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 3.1e-53 211.8 120 79.2
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 9.1e-53 210.3 122 79.5
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 2.0e-52 209.1 117 79.5
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 2.7e-52 208.8 119 80.7
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.5e-52 208.4 119 79.0
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 3.5e-52 208.4 111 84.7
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 7.7e-52 207.2 128 75.0
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 7.7e-52 207.2 121 77.7
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 1.0e-51 206.8 135 75.6
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.0e-51 206.8 135 75.6
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.0e-51 206.8 135 75.6
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.0e-51 206.8 119 77.3
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.0e-51 206.8 119 77.3
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 1.3e-51 206.5 135 74.1
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 2.9e-51 205.3 138 71.0
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 3.8e-51 204.9 119 81.5
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 3.8e-51 204.9 135 75.6
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 3.8e-51 204.9 133 76.7
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 3.2e-50 201.8 121 76.0
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 5.5e-50 201.1 134 73.1
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 1.6e-49 199.5 113 78.8
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 2.7e-49 198.7 114 79.8
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 6.1e-49 197.6 129 71.3
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.4e-48 196.4 112 77.7
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 1.4e-48 196.4 124 73.4
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.8e-48 196.1 110 80.0
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 1.8e-48 196.1 176 58.0
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 2.3e-48 195.7 117 74.4
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 4.0e-48 194.9 112 76.8
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.0e-48 194.9 117 76.9
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 8.8e-48 193.7 117 78.6
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 8.8e-48 193.7 112 78.6
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 8.8e-48 193.7 121 71.9
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.2e-47 193.4 113 77.9
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.5e-47 193.0 121 72.7
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 2.6e-47 192.2 126 70.6
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 2.6e-47 192.2 126 70.6
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 3.4e-47 191.8 126 73.0
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 3.4e-47 191.8 130 70.0
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 4.4e-47 191.4 130 70.0
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 4.4e-47 191.4 119 73.9
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 5.7e-47 191.0 118 76.3
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 7.5e-47 190.7 127 72.4
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.3e-46 189.9 117 72.6
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 1.3e-46 189.9 114 75.4
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 1.7e-46 189.5 119 72.3
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 2.8e-46 188.7 108 77.8
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 4.9e-46 188.0 163 60.7
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 4.9e-46 188.0 130 67.7
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 8.3e-46 187.2 117 71.8
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.4e-45 186.4 124 71.8
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.8e-45 186.0 108 77.8
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 2.4e-45 185.7 126 69.0
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 2.4e-45 185.7 108 74.1
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 5.4e-45 184.5 108 75.0
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 5.4e-45 184.5 115 73.0
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 5.4e-45 184.5 115 69.6
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 7.0e-45 184.1 110 73.6
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 1.2e-44 183.3 115 72.2
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.2e-44 183.3 115 72.2
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 1.2e-44 183.3 120 71.7
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.3e-43 179.9 120 70.8
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 1.7e-43 179.5 123 65.9
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 2.3e-43 179.1 112 72.3
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 2.9e-43 178.7 110 74.5
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 3.8e-43 178.3 121 72.7
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 1.5e-42 176.4 109 69.7
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 3.3e-42 175.3 112 67.9
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 7.2e-42 174.1 110 70.9
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 7.2e-42 174.1 155 53.5
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.1e-41 172.6 155 54.2
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 2.8e-41 172.2 121 66.9
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 2.8e-41 172.2 111 67.6
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 3.6e-41 171.8 109 71.6
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 1.8e-40 169.5 132 59.8
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 2.3e-40 169.1 121 65.3
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 2.3e-40 169.1 127 63.0
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 5.2e-40 167.9 108 66.7
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 8.9e-40 167.2 95 82.1
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.9e-40 167.2 95 83.2
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 8.9e-40 167.2 111 65.8
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 2.6e-39 165.6 110 67.3
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 7.5e-39 164.1 167 52.1
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 4.9e-38 161.4 109 68.8
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 3.2e-37 158.7 125 61.6
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 4.6e-36 154.8 116 60.3
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 1.0e-35 153.7 111 60.4
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 2.5e-34 149.1 119 56.3
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 3.2e-29 132.1 105 58.1
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 4.6e-28 128.3 105 52.4
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 1.4e-24 116.7 90 65.6
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 2.0e-23 112.8 108 47.2
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 3.7e-22 108.6 94 55.3
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.1e-21 107.1 88 60.2
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 4.3e-18 95.1 53 81.1
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 4.7e-17 91.7 98 43.9
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 4.7e-17 91.7 68 63.2
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.3e-16 89.4 57 66.7
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 1.2e-15 87.0 51 76.5
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.2e-15 87.0 48 79.2
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.5e-15 86.7 51 74.5
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 3.4e-15 85.5 51 72.5
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 9.9e-15 84.0 50 74.0
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 1.6e-12 76.6 49 69.4
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 7.8e-12 74.3 44 70.5
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 1.3e-11 73.6 48 68.8
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 1.8e-08 63.2 77 35.1
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 3.1e-08 62.4 94 40.4


User provided reference genes

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