Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 4.1e-105 384.8 202 100.0
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 8.5e-87 323.9 196 84.7
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 1.5e-83 313.2 234 74.8
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 3.4e-83 312.0 196 84.7
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 3.6e-69 265.4 212 66.0
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 5.4e-65 251.5 212 63.2
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 5.6e-62 241.5 204 66.2
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 1.2e-61 240.4 214 61.2
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 1.1e-60 237.3 203 61.6
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 1.4e-60 236.9 220 57.3
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.2e-59 233.8 222 56.3
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 1.2e-59 233.8 206 62.1
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 1.5e-59 233.4 206 64.6
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.3e-58 230.3 222 55.9
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 2.9e-58 229.2 223 56.1
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 3.7e-58 228.8 225 54.2
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 6.4e-58 228.0 223 56.1
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 8.3e-58 227.6 219 54.8
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 1.1e-57 227.3 203 59.1
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 3.2e-57 225.7 218 55.0
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 1.2e-56 223.8 218 54.6
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.1e-56 223.0 220 54.5
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 2.7e-56 222.6 220 55.5
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 4.6e-56 221.9 222 54.1
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.0e-55 220.7 223 55.2
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.3e-55 220.3 220 53.6
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 3.9e-55 218.8 194 61.3
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 5.1e-55 218.4 242 51.7
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 5.1e-55 218.4 221 53.8
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 6.6e-55 218.0 165 66.7
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 1.9e-54 216.5 221 52.5
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 5.6e-54 214.9 219 52.5
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 9.5e-54 214.2 224 52.2
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 9.5e-54 214.2 224 52.2
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 4.7e-53 211.8 218 54.1
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 3.1e-52 209.1 219 53.0
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 4.0e-52 208.8 166 62.0
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 4.0e-52 208.8 226 51.3
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 5.2e-52 208.4 157 65.6
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 6.8e-52 208.0 232 51.7
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 6.8e-52 208.0 222 53.6
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 8.9e-52 207.6 227 50.2
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 8.9e-52 207.6 234 52.6
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 1.2e-51 207.2 230 49.6
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 2.0e-51 206.5 227 49.8
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 2.0e-51 206.5 166 60.8
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 2.0e-51 206.5 229 50.7
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 2.0e-51 206.5 162 62.3
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 2.6e-51 206.1 220 51.8
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 2.6e-51 206.1 239 51.0
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 2.6e-51 206.1 228 50.0
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 2.6e-51 206.1 210 51.9
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 3.4e-51 205.7 225 52.0
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 7.6e-51 204.5 151 64.2
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 7.6e-51 204.5 227 48.0
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 3.7e-50 202.2 151 64.2
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 4.9e-50 201.8 221 50.2
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 4.9e-50 201.8 226 50.0
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 6.4e-50 201.4 221 50.2
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 6.4e-50 201.4 151 64.9
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 6.4e-50 201.4 230 49.6
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 6.4e-50 201.4 227 47.6
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 8.3e-50 201.1 163 59.5
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 8.3e-50 201.1 222 48.6
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 1.1e-49 200.7 216 50.9
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 1.1e-49 200.7 216 50.9
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 1.9e-49 199.9 225 47.1
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 1.9e-49 199.9 227 48.5
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 1.9e-49 199.9 199 56.8
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 2.4e-49 199.5 219 50.2
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 3.2e-49 199.1 208 52.4
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 4.1e-49 198.7 224 49.1
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 4.1e-49 198.7 151 63.6
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 5.4e-49 198.4 151 63.6
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 9.2e-49 197.6 228 49.6
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 1.2e-48 197.2 158 62.0
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 1.2e-48 197.2 192 53.1
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 1.6e-48 196.8 191 55.0
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 2.1e-48 196.4 230 47.4
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 2.1e-48 196.4 156 62.2
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 3.5e-48 195.7 161 63.4
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 4.6e-48 195.3 224 50.4
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 6.0e-48 194.9 159 59.1
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 1.0e-47 194.1 214 50.5
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.0e-47 194.1 251 46.2
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 1.0e-47 194.1 195 53.3
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 1.7e-47 193.4 224 46.4
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 1.7e-47 193.4 218 49.1
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 3.0e-47 192.6 225 49.3
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 3.9e-47 192.2 215 49.8
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 1.1e-46 190.7 209 49.8
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 1.1e-46 190.7 222 46.8
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 1.5e-46 190.3 212 52.4
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 1.9e-46 189.9 226 47.8
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 1.9e-46 189.9 216 48.1
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 2.5e-46 189.5 189 53.4
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 2.5e-46 189.5 224 49.6
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 3.3e-46 189.1 216 48.1
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 4.3e-46 188.7 234 47.0
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 5.6e-46 188.3 185 55.1
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 7.3e-46 188.0 185 55.1
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 9.6e-46 187.6 230 48.7
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 9.6e-46 187.6 222 45.9
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 1.2e-45 187.2 224 49.1
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 1.2e-45 187.2 226 48.7
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.2e-45 187.2 184 54.3
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 1.6e-45 186.8 161 55.3
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 2.8e-45 186.0 224 47.8
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 8.1e-45 184.5 176 55.1
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 8.1e-45 184.5 151 60.3
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 8.1e-45 184.5 214 48.1
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 1.1e-44 184.1 213 49.3
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 1.1e-44 184.1 195 50.8
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 1.4e-44 183.7 210 50.0
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 3.1e-44 182.6 187 54.5
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 6.8e-44 181.4 230 47.4
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 1.5e-43 180.3 234 44.4
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 4.4e-43 178.7 214 47.2
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 5.8e-43 178.3 164 56.7
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 7.6e-43 177.9 235 44.7
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.7e-42 176.8 231 44.6
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 3.8e-42 175.6 151 55.0
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 8.4e-42 174.5 240 43.3
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.1e-41 174.1 234 44.0
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 3.2e-41 172.6 128 64.8
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 1.2e-40 170.6 233 44.2
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 1.6e-40 170.2 132 62.9
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 5.1e-39 165.2 145 57.9
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 8.7e-39 164.5 160 53.1
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 1.9e-38 163.3 201 50.7
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 2.8e-37 159.5 167 49.7
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.8e-36 156.8 166 51.2
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 1.5e-35 153.7 176 47.7
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 2.6e-35 152.9 219 42.5
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 1.3e-34 150.6 151 51.0
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 2.9e-34 149.4 120 58.3
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.9e-30 136.7 142 50.0
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 1.7e-26 123.6 163 44.8
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 1.6e-24 117.1 194 39.2
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 3.3e-22 109.4 107 51.4
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 7.4e-22 108.2 152 38.2
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 4.0e-20 102.4 73 63.0
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 4.9e-18 95.5 69 62.3
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 1.4e-17 94.0 145 42.1
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 1.2e-16 90.9 58 70.7
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 5.1e-15 85.5 189 36.0
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 4.3e-14 82.4 55 63.6
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 7.4e-14 81.6 53 66.0
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 3.7e-13 79.3 87 49.4
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 2.9e-10 69.7 108 40.7
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.6e-08 63.9 53 56.6
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 2.3e-07 60.1 60 50.0
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 3.0e-07 59.7 50 52.0
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 1.9e-06 57.0 68 39.7
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 3.3e-06 56.2 36 63.9


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