Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 1.8e-131 472.6 245 100.0
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 1.5e-122 443.0 245 90.6
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 2.5e-109 399.1 214 89.7
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 4.2e-104 381.7 249 78.3
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 2.4e-99 365.9 249 79.9
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 2.6e-98 362.5 214 80.8
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 1.9e-96 356.3 215 78.6
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 3.0e-94 349.0 213 79.3
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 1.8e-91 339.7 248 67.3
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 4.1e-91 338.6 216 71.8
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 3.4e-90 335.5 246 67.1
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 2.2e-89 332.8 247 66.0
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 6.5e-89 331.3 244 65.6
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 8.5e-89 330.9 224 71.9
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 5.5e-88 328.2 236 66.9
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 4.6e-87 325.1 214 69.6
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 6.7e-86 321.2 215 67.9
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 1.1e-85 320.5 211 69.2
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 2.0e-85 319.7 224 68.3
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 2.6e-85 319.3 219 70.8
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 7.4e-85 317.8 240 63.8
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 9.7e-85 317.4 214 69.2
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 1.7e-84 316.6 235 66.0
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 2.2e-84 316.2 207 71.0
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 1.1e-83 313.9 214 67.8
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 1.8e-83 313.2 217 68.7
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 4.1e-83 312.0 216 67.1
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 9.1e-83 310.8 214 68.7
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 9.1e-83 310.8 221 67.4
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 1.5e-82 310.1 247 62.8
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 2.6e-82 309.3 220 67.7
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 4.5e-82 308.5 249 61.0
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 4.5e-82 308.5 216 69.0
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 7.7e-82 307.8 217 67.7
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 3.8e-81 305.4 205 68.8
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 1.6e-79 300.1 250 60.8
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 1.6e-79 300.1 206 70.4
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 7.9e-79 297.7 209 65.6
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 2.3e-78 296.2 212 65.1
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 3.0e-78 295.8 220 65.9
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 5.2e-78 295.0 204 65.7
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 6.7e-78 294.7 247 61.5
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 3.3e-77 292.4 218 63.3
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 5.7e-77 291.6 253 60.1
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 9.7e-77 290.8 215 64.2
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 1.3e-76 290.4 214 61.7
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 2.8e-76 289.3 201 66.2
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 6.3e-76 288.1 211 63.0
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 6.3e-76 288.1 206 66.5
MELO3C011137.2 Cucumis melo HOM05D005944 ORTHO05D007188 1.4e-75 287.0 211 61.6
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 3.1e-75 285.8 206 65.5
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 7.0e-75 284.6 208 64.4
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 9.1e-75 284.3 206 65.0
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 2.0e-74 283.1 208 64.4
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 1.0e-73 280.8 213 64.8
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.0e-73 280.8 214 63.6
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 2.9e-73 279.3 205 62.9
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 3.8e-73 278.9 208 63.5
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 3.8e-73 278.9 243 56.4
DCAR_003123 Daucus carota HOM05D005944 ORTHO05D007188 5.0e-73 278.5 245 55.5
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 6.5e-73 278.1 207 64.3
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 8.5e-73 277.7 218 61.9
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 8.5e-73 277.7 207 61.4
Nitab4.5_0001567g0220 Nicotiana tabacum HOM05D005944 ORTHO05D007188 3.6e-71 272.3 204 64.7
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.8e-70 270.0 207 62.3
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 1.8e-70 270.0 197 62.9
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 3.0e-70 269.2 276 52.5
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 1.5e-69 266.9 201 63.7
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 1.7e-68 263.5 215 59.5
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 1.4e-67 260.4 203 61.1
Nitab4.5_0000664g0190 Nicotiana tabacum HOM05D005944 ORTHO05D007188 2.2e-65 253.1 201 61.2
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 1.5e-64 250.4 218 58.3
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 3.2e-64 249.2 211 55.9
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 1.2e-63 247.3 211 56.9
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 2.7e-63 246.1 231 51.1
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 3.4e-61 239.2 208 54.3
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 3.4e-61 239.2 210 53.8
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 4.4e-61 238.8 208 54.3
AUR62011965 Chenopodium quinoa HOM05D005944 ORTHO05D007188 2.2e-60 236.5 208 52.9
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 4.8e-60 235.3 243 49.0
FAN20G0862 Fragaria x ananassa HOM05D005944 ORTHO05D007188 1.1e-59 234.2 213 52.1
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 7.0e-59 231.5 234 52.6
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 1.2e-58 230.7 245 49.0
Nitab4.5_0001515g0030 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.2e-58 230.7 241 53.5
FAN15G0753 Fragaria x ananassa HOM05D005944 ORTHO05D007188 3.5e-58 229.2 208 52.4
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 3.8e-57 225.7 245 46.9
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 5.0e-57 225.3 242 47.1
HanXRQChr02g0050591 Helianthus annuus HOM05D005944 ORTHO05D007188 6.5e-57 224.9 185 56.2
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 8.6e-57 224.6 210 54.8
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 1.9e-56 223.4 249 46.2
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 3.2e-56 222.6 236 48.7
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 4.2e-56 222.2 192 56.2
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 1.2e-55 220.7 239 48.1
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 1.2e-55 220.7 239 48.1
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 3.6e-55 219.2 238 47.5
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 3.6e-55 219.2 239 47.7
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 3.6e-55 219.2 239 47.7
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 3.6e-55 219.2 239 47.7
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 4.7e-55 218.8 238 47.9
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 6.8e-54 214.9 246 45.1
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 8.8e-54 214.5 239 46.9
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 3.7e-52 209.1 208 50.0
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 1.4e-51 207.2 137 78.8
HanXRQChr13g0402041 Helianthus annuus HOM05D005944 ORTHO05D007188 7.3e-48 194.9 199 49.2
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 5.7e-45 185.3 201 46.8
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 2.4e-43 179.9 212 46.7
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 9.2e-43 177.9 202 46.0
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 1.3e-41 174.1 201 45.8
Peaxi162Scf00247g00005 Petunia axillaris HOM05D005944 ORTHO05D007188 1.9e-40 170.2 115 67.8
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 1.2e-39 167.5 196 43.9
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 2.1e-39 166.8 140 59.3
Solyc11g071190.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 2.0e-37 160.2 124 62.1
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 7.5e-37 158.3 188 45.2
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 3.7e-36 156.0 196 41.8
Zm00001eb277580 Zea mays HOM05D005944 ORTHO05D007188 2.5e-32 143.3 150 48.7
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 3.1e-30 136.3 232 35.8
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 4.0e-30 136.0 210 38.1
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 1.4e-27 127.5 213 36.6
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 1.9e-27 127.1 213 37.1
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 4.6e-26 122.5 227 35.2
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 1.7e-25 120.6 217 35.9
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 3.0e-25 119.8 239 32.2
CDE05G1550 Ceratophyllum demersum HOM05D005944 ORTHO05D007188 4.3e-24 115.9 105 49.5
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 3.4e-21 106.3 231 32.0
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 1.1e-14 84.7 278 27.0
RcHm_v2.0_Chr6g0306281 Rosa chinensis HOM05D005944 ORTHO05D007188 2.6e-13 80.1 56 58.9
RcHm_v2.0_Chr6g0306391 Rosa chinensis HOM05D005944 ORTHO05D007188 2.2e-12 77.0 97 41.2
RcHm_v2.0_Chr6g0306291 Rosa chinensis HOM05D005944 ORTHO05D007188 1.1e-11 74.7 58 53.4
C02p05290 Brassica napus HOM05D005944 ORTHO05D007188 1.9e-11 73.9 106 42.5
Mapoly0068s0072 Marchantia polymorpha HOM05D005944 ORTHO05D007188 5.4e-11 72.4 149 28.9
BolC2t06477H Brassica oleracea HOM05D005944 ORTHO05D007188 9.3e-11 71.6 112 38.4


User provided reference genes

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