Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.0e-168 596.7 299 100.0
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 7.0e-154 547.4 300 94.0
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 8.9e-149 530.4 299 89.0
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 8.9e-133 477.2 274 88.3
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 3.5e-121 438.7 299 74.9
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 4.2e-114 415.2 295 72.9
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 4.6e-113 411.8 303 70.6
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.5e-103 380.2 285 68.1
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 1.5e-103 380.2 301 67.4
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.5e-103 380.2 300 66.0
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 4.8e-102 375.2 296 63.2
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 4.8e-102 375.2 281 66.2
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.8e-101 373.2 300 64.7
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 1.8e-101 373.2 300 65.3
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.8e-101 373.2 302 64.2
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.5e-100 370.2 299 64.5
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.5e-100 370.2 238 78.2
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.6e-100 369.4 306 64.7
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 5.8e-100 368.2 277 65.7
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 7.6e-100 367.9 296 63.5
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.7e-99 366.7 279 65.2
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 4.9e-99 365.2 301 62.1
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 8.4e-99 364.4 301 62.8
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 8.4e-99 364.4 293 63.5
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 8.4e-99 364.4 298 64.4
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.9e-98 363.2 302 63.9
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 2.5e-98 362.8 303 64.0
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 7.1e-98 361.3 280 64.3
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 9.3e-98 360.9 293 63.1
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 9.3e-98 360.9 295 61.7
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 9.3e-98 360.9 295 61.7
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 1.2e-97 360.5 278 65.1
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 2.1e-97 359.8 301 62.5
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.7e-97 359.4 273 64.8
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.0e-96 357.5 289 64.0
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 1.3e-96 357.1 298 62.1
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.8e-96 356.7 252 69.8
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 5.1e-96 355.1 290 62.8
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.1e-96 355.1 300 63.0
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.1e-96 355.1 234 76.1
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 6.7e-96 354.8 253 70.0
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 8.7e-96 354.4 300 62.7
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 2.5e-95 352.8 246 70.3
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 4.3e-95 352.1 304 61.8
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 4.3e-95 352.1 279 63.1
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 4.3e-95 352.1 302 61.3
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 9.7e-95 350.9 246 70.3
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 2.2e-94 349.7 293 61.8
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 8.2e-94 347.8 289 61.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 8.2e-94 347.8 297 60.9
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 1.1e-93 347.4 247 69.6
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 2.4e-93 346.3 251 67.3
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 2.4e-93 346.3 247 69.6
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 3.4e-92 342.4 278 62.2
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 7.7e-92 341.3 279 59.5
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.0e-91 340.9 246 67.1
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.7e-91 340.1 260 64.2
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 2.9e-91 339.3 243 67.9
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 2.9e-91 339.3 243 67.9
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 5.0e-91 338.6 237 69.2
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 6.5e-91 338.2 215 75.8
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.1e-90 337.4 253 64.4
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 1.4e-90 337.0 248 66.1
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.4e-90 337.0 248 66.1
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.4e-90 337.0 248 66.1
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.9e-90 336.7 291 58.8
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 5.5e-90 335.1 289 59.5
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 7.2e-90 334.7 246 65.9
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 7.2e-90 334.7 254 64.2
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 7.2e-90 334.7 253 64.0
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 9.4e-90 334.3 246 68.3
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.2e-89 334.0 252 66.7
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.6e-89 333.6 288 61.1
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.6e-89 333.6 291 58.4
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 2.7e-89 332.8 287 59.9
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 3.6e-89 332.4 289 58.8
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 7.9e-89 331.3 291 57.4
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 9.7e-87 324.3 256 62.5
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 2.4e-85 319.7 371 52.0
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.2e-84 317.4 256 62.1
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 2.0e-84 316.6 297 56.2
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 2.6e-84 316.2 297 56.2
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 3.4e-84 315.8 256 59.4
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 4.5e-84 315.5 241 65.1
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.7e-84 314.7 308 53.9
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.7e-83 313.5 282 59.9
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 3.8e-83 312.4 241 63.5
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 4.8e-78 295.4 256 61.3
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.3e-77 292.0 269 60.6
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 5.0e-75 285.4 228 66.2
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 1.1e-74 284.3 240 62.1
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 2.0e-71 273.5 295 50.8
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 3.3e-71 272.7 216 64.4
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 9.7e-71 271.2 275 54.2
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 8.2e-70 268.1 268 57.8
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.4e-69 266.5 268 57.5
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 5.5e-66 255.4 183 65.6
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 2.1e-65 253.4 262 55.0
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 4.7e-65 252.3 248 51.6
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.8e-64 250.4 303 46.9
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 5.7e-63 245.4 158 75.9
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.1e-61 241.1 334 43.7
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.1e-61 241.1 167 67.7
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 3.4e-47 193.0 176 57.4
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 8.9e-40 168.3 101 72.3
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 4.4e-39 166.0 130 58.5
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 5.4e-37 159.1 247 37.7
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.5e-31 141.0 107 61.7
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 4.6e-28 129.4 194 38.7
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.3e-09 68.2 58 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 3.6e-09 66.6 101 37.6
Lalb_Chr10g0091861 Lupinus albus HOM05D002933 ORTHO05D007742 1.3e-06 58.2 228 24.1


User provided reference genes

Program Settings