Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 2.0e-165 585.9 338 100.0
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 5.0e-140 501.5 339 86.1
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 1.5e-123 446.8 340 72.4
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 2.8e-122 442.6 342 78.1
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.3e-92 344.0 320 62.2
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 9.6e-91 337.8 350 62.9
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 4.9e-87 325.5 340 56.2
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.1e-83 314.3 315 57.5
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 2.1e-82 310.1 347 58.5
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.4e-81 307.4 346 56.9
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.1e-73 281.2 269 56.5
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 6.9e-73 278.5 271 57.2
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 1.7e-71 273.9 271 56.5
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.9e-70 270.4 264 59.1
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 4.2e-70 269.2 271 60.5
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 1.6e-69 267.3 273 57.1
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 5.1e-68 262.3 269 59.9
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 8.7e-68 261.5 278 54.7
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 9.6e-67 258.1 269 59.5
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 1.6e-66 257.3 274 52.6
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 6.2e-66 255.4 276 58.0
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 6.2e-66 255.4 276 58.0
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 1.8e-65 253.8 284 56.0
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 3.1e-65 253.1 284 56.7
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.2e-64 251.1 264 54.9
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.5e-64 250.8 241 57.3
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 4.5e-64 249.2 265 51.3
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 5.8e-64 248.8 263 57.4
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.0e-63 248.1 306 52.3
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 2.9e-63 246.5 273 59.7
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.1e-62 244.6 267 54.3
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 1.9e-62 243.8 289 56.1
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.5e-62 243.4 265 57.7
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 2.5e-62 243.4 275 54.9
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 3.2e-62 243.0 272 57.4
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 4.2e-62 242.7 263 52.5
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 7.1e-62 241.9 269 53.9
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 9.3e-62 241.5 271 55.4
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.2e-61 241.1 265 55.1
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.1e-61 240.4 263 52.5
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 2.7e-61 240.0 302 52.6
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 6.0e-61 238.8 274 53.6
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 7.9e-61 238.4 274 51.5
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 1.8e-60 237.3 278 54.0
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.8e-60 237.3 270 57.4
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.8e-60 237.3 270 56.7
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 2.3e-60 236.9 262 50.8
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 5.1e-60 235.7 279 56.3
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 1.9e-59 233.8 267 56.2
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 3.3e-59 233.0 262 56.1
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 7.4e-59 231.9 264 54.9
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 7.4e-59 231.9 270 56.3
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.3e-58 231.1 264 50.0
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 1.6e-58 230.7 280 48.9
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 2.1e-58 230.3 280 53.9
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 1.4e-57 227.6 269 55.8
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 1.4e-57 227.6 263 49.4
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 2.4e-57 226.9 263 55.5
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 2.4e-57 226.9 288 53.8
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.1e-57 226.5 278 52.5
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 5.3e-57 225.7 323 49.2
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 6.9e-57 225.3 279 54.5
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 9.0e-57 224.9 274 53.3
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.5e-56 222.6 275 53.8
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 5.9e-56 222.2 262 55.3
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 5.9e-56 222.2 272 54.4
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 1.3e-55 221.1 265 55.5
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 1.3e-55 221.1 278 53.2
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 2.2e-55 220.3 278 54.0
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 3.8e-55 219.5 335 46.6
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 3.8e-55 219.5 258 55.4
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 3.8e-55 219.5 261 53.6
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 3.8e-55 219.5 263 53.6
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.1e-54 218.0 276 50.4
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 1.4e-54 217.6 278 47.8
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 4.2e-54 216.1 263 52.9
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 5.5e-54 215.7 264 54.2
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 5.5e-54 215.7 262 47.7
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 7.2e-54 215.3 279 52.7
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 7.2e-54 215.3 265 47.2
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.6e-53 214.2 258 50.4
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 2.7e-53 213.4 266 53.0
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 4.6e-53 212.6 257 51.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 6.1e-53 212.2 265 47.9
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 6.1e-53 212.2 269 45.7
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 1.0e-52 211.5 268 53.0
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.8e-52 210.7 258 53.5
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 3.0e-52 209.9 262 47.3
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.1e-51 208.0 180 60.6
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.3e-50 204.5 303 44.6
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.1e-49 199.5 253 53.8
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 6.9e-49 198.7 269 47.2
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 1.4e-46 191.0 220 51.8
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 2.7e-45 186.8 159 59.7
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 7.9e-45 185.3 265 44.2
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 1.5e-43 181.0 148 60.1
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.5e-43 181.0 164 57.9
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 8.2e-42 175.3 225 54.7
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 9.1e-41 171.8 255 49.4
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 4.5e-40 169.5 148 62.8
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.9e-36 156.4 120 60.8
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 8.2e-34 148.7 228 46.1
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 7.2e-30 135.6 261 40.6
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 5.2e-28 129.4 272 39.0
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 2.7e-21 107.1 269 34.2
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 6.1e-21 105.9 120 46.7
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 3.0e-20 103.6 236 36.9
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 1.7e-18 97.8 116 44.0
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 4.5e-16 89.7 56 76.8
Psat5g000080 Pisum sativum HOM05D006924 ORTHO05D008218 5.5e-14 82.8 101 48.5
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 1.0e-12 78.6 47 74.5
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 2.3e-12 77.4 134 38.8
TPR.G31762 Trifolium pratense HOM05D006924 ORTHO05D008218 3.0e-12 77.0 74 55.4
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 1.7e-10 71.2 84 45.2
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 3.7e-10 70.1 54 51.9
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 5.4e-09 66.2 182 31.9
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 1.0e-07 62.0 100 53.0


User provided reference genes

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