Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 8.2e-97 357.5 237 100.0
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 5.3e-88 328.2 237 94.5
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 5.5e-85 318.2 240 90.8
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 1.1e-80 303.9 241 88.4
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 3.7e-73 278.9 238 85.3
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 9.1e-72 274.2 243 84.0
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 2.0e-71 273.1 242 82.6
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 3.2e-69 265.8 242 82.2
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 3.6e-68 262.3 240 82.1
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 1.4e-67 260.4 238 82.4
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 2.3e-67 259.6 238 82.4
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 3.4e-58 229.2 198 87.4
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 1.3e-57 227.3 242 74.0
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 3.7e-57 225.7 242 74.8
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 6.3e-57 224.9 242 74.4
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 6.3e-57 224.9 242 74.4
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 4.1e-56 222.2 241 74.3
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 4.5e-55 218.8 243 74.1
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 3.8e-54 215.7 242 74.4
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 1.1e-53 214.2 255 70.6
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 2.5e-53 213.0 242 71.1
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 2.5e-53 213.0 237 74.7
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 3.3e-53 212.6 244 71.7
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 3.3e-53 212.6 237 74.7
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 9.5e-53 211.1 239 73.2
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 1.2e-52 210.7 242 72.7
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.6e-52 210.3 242 72.7
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 1.6e-52 210.3 238 73.5
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 2.1e-52 209.9 242 72.3
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 2.8e-52 209.5 238 71.8
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 3.6e-52 209.1 240 71.2
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 3.6e-52 209.1 243 71.6
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 3.6e-52 209.1 247 70.9
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 4.7e-52 208.8 242 73.1
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 4.7e-52 208.8 242 72.7
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 8.0e-52 208.0 242 71.9
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 1.0e-51 207.6 186 86.6
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 1.0e-51 207.6 233 72.5
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 1.0e-51 207.6 242 72.3
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 1.8e-51 206.8 229 73.8
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 1.8e-51 206.8 238 73.5
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 1.8e-51 206.8 242 70.2
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 3.0e-51 206.1 210 80.5
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 4.0e-51 205.7 242 71.1
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 5.2e-51 205.3 242 69.8
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 1.2e-50 204.1 242 69.4
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 2.6e-50 203.0 197 82.2
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 3.4e-50 202.6 242 71.5
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.4e-50 202.2 188 85.1
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 4.4e-50 202.2 237 71.3
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 7.5e-50 201.4 242 71.1
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 7.5e-50 201.4 242 70.2
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 9.8e-50 201.1 210 78.6
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 1.3e-49 200.7 244 70.1
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 2.8e-49 199.5 209 77.5
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 2.8e-49 199.5 222 75.2
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 3.7e-49 199.1 183 86.3
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 4.9e-49 198.7 199 79.9
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.3e-49 198.0 186 84.9
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.3e-49 198.0 240 70.4
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 1.1e-48 197.6 236 71.6
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 2.4e-48 196.4 199 79.9
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 4.1e-48 195.7 242 69.0
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.1e-48 195.7 259 46.7
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 5.4e-48 195.3 242 60.3
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 5.4e-48 195.3 240 69.6
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 9.2e-48 194.5 235 71.1
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 1.2e-47 194.1 270 54.1
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 4.5e-47 192.2 243 67.5
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 7.8e-47 191.4 220 62.7
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 1.7e-46 190.3 237 70.5
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.7e-46 190.3 237 70.5
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 2.9e-46 189.5 242 68.2
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 3.9e-46 189.1 228 69.3
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 5.0e-46 188.7 243 69.1
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 5.0e-46 188.7 186 66.7
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 5.0e-46 188.7 236 68.2
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.5e-45 187.2 237 70.5
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 2.5e-45 186.4 238 69.3
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 7.3e-45 184.9 242 65.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.6e-44 183.7 195 76.9
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 2.1e-44 183.3 243 65.0
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 4.7e-44 182.2 194 78.4
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 6.1e-44 181.8 199 76.9
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.4e-43 180.6 240 69.6
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 3.1e-43 179.5 242 65.7
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 3.1e-43 179.5 242 64.5
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 3.1e-43 179.5 185 80.5
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 3.1e-43 179.5 158 60.8
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 3.1e-43 179.5 194 77.8
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 6.8e-43 178.3 239 65.3
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 8.9e-43 177.9 186 54.8
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 1.2e-42 177.6 238 64.7
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 2.0e-42 176.8 158 60.8
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-41 174.1 240 49.2
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 2.2e-41 173.3 184 77.7
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 4.9e-41 172.2 184 80.4
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 8.3e-41 171.4 180 81.1
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 1.9e-40 170.2 245 62.0
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 4.1e-40 169.1 241 63.5
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 5.4e-40 168.7 221 68.8
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.4e-40 168.7 242 65.7
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 9.2e-40 167.9 130 67.7
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 9.2e-40 167.9 130 67.7
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 9.2e-40 167.9 130 67.7
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 1.6e-39 167.2 192 75.5
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 1.6e-39 167.2 192 75.5
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 2.0e-39 166.8 243 63.0
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.6e-39 165.6 130 66.9
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 7.8e-39 164.9 130 66.9
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 1.0e-38 164.5 180 78.9
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.7e-38 163.7 130 66.2
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.3e-38 163.3 130 64.6
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 3.9e-38 162.5 157 86.6
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.9e-38 162.5 240 48.3
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 6.6e-38 161.8 166 81.3
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 8.6e-38 161.4 224 64.3
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 4.3e-37 159.1 111 73.9
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 5.6e-37 158.7 166 81.9
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 1.6e-36 157.1 211 46.4
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 1.6e-36 157.1 211 46.4
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 4.4e-34 149.1 133 63.2
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 6.4e-33 145.2 129 57.4
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 7.1e-32 141.7 242 60.7
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 7.1e-32 141.7 77 87.0
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 9.2e-32 141.4 156 79.5
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 9.5e-29 131.3 210 57.6
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 4.7e-20 102.4 65 73.8
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 1.3e-12 77.8 116 77.6
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 1.2e-10 71.2 183 37.7


User provided reference genes

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