Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 8.8e-119 430.3 209 100.0
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 2.4e-116 422.2 209 97.1
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 7.7e-107 390.6 209 89.5
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 1.0e-106 390.2 209 90.0
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 1.0e-106 390.2 209 90.0
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 1.0e-106 390.2 209 89.5
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 5.0e-106 387.9 209 87.6
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 6.5e-106 387.5 209 89.0
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 6.5e-106 387.5 209 89.0
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 8.5e-106 387.1 209 87.6
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 1.1e-105 386.7 209 86.6
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 87.1
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 87.6
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 3.6e-104 381.7 209 87.6
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 6.1e-104 380.9 209 86.1
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.0e-103 380.2 209 86.6
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 86.6
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 84.7
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 87.1
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 86.1
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 86.1
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 85.2
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 84.2
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 86.1
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 83.7
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 83.3
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 85.2
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 84.7
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.7e-101 372.9 209 85.2
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 85.2
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 2.8e-101 372.1 209 84.7
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 2.8e-101 372.1 193 92.7
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 3.7e-101 371.7 209 82.8
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 3.7e-101 371.7 209 85.6
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 84.2
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 4.8e-101 371.3 209 86.6
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 84.2
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 85.6
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 87.1
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 4.1e-100 368.2 209 83.7
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 4.1e-100 368.2 209 83.7
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 5.3e-100 367.9 209 84.2
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 7.0e-100 367.5 209 82.8
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 82.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 9.1e-100 367.1 208 84.1
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.7
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.0e-99 365.9 185 95.1
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 82.8
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 84.2
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 82.3
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 82.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 82.8
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 79.9
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 82.3
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 81.3
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 81.3
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 81.8
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 5.0e-98 361.3 209 82.3
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.1e-97 360.1 221 80.5
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 1.5e-97 359.8 225 78.2
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.5e-97 359.0 209 83.7
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 81.3
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 81.3
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 5.5e-97 357.8 209 81.3
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 5.5e-97 357.8 209 82.8
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 7.2e-97 357.5 209 80.9
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 9.4e-97 357.1 209 80.9
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.6e-96 356.3 210 81.9
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.6e-96 355.1 230 77.8
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 6.1e-96 354.4 209 80.9
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 6.1e-96 354.4 209 80.9
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 6.1e-96 354.4 209 80.9
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.0e-95 353.6 209 80.4
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 1.4e-95 353.2 209 80.4
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 2.3e-95 352.4 209 81.3
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.3e-95 352.4 230 77.4
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 80.4
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 80.4
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 80.4
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 5.2e-95 351.3 208 80.8
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 2.0e-94 349.4 209 79.4
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 2.0e-94 349.4 209 80.4
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.0e-94 349.4 240 74.2
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.0e-94 349.4 190 87.9
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 3.3e-94 348.6 209 79.4
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 5.7e-94 347.8 190 86.3
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.3e-93 346.7 209 79.4
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 3.7e-93 345.1 209 78.9
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 4.8e-93 344.7 243 70.4
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 1.3e-90 336.7 189 82.5
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.2e-90 335.9 187 85.6
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 6.5e-90 334.3 209 76.6
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.5e-89 333.2 209 75.6
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.6e-88 329.7 209 76.6
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 4.7e-88 328.2 288 60.4
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 8.0e-88 327.4 191 82.2
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.8e-87 326.2 187 81.8
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 2.3e-87 325.9 187 83.4
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 1.3e-85 320.1 206 73.8
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 2.8e-85 318.9 208 70.2
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 3.7e-85 318.5 209 72.2
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 8.6e-82 307.4 206 72.3
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 5.7e-78 294.7 197 74.6
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 2.8e-77 292.4 205 66.8
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 5.4e-76 288.1 209 70.3
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 2.3e-74 282.7 165 81.2
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 8.0e-72 274.2 165 78.8
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 1.1e-68 263.8 151 82.1
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 5.2e-63 245.0 209 61.7
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 2.0e-62 243.0 185 63.8
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.3e-61 240.4 203 58.1
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.3e-61 240.4 208 59.1
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 3.5e-59 232.3 167 67.7
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 4.6e-59 231.9 208 52.9
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.1e-57 227.3 135 79.3
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 5.4e-52 208.4 206 51.9
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 1.1e-49 200.7 152 66.4
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 9.9e-46 187.6 206 46.6
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.4e-39 167.2 207 39.6
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 1.2e-38 164.1 149 60.4
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 7.8e-35 151.4 163 51.5
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.9e-33 146.7 136 50.7
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.5e-33 146.4 84 82.1
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 5.6e-33 145.2 84 83.3
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 9.9e-30 134.4 135 48.1
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 8.7e-26 121.3 231 33.8
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.1e-25 120.9 74 78.4
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.0e-18 97.8 83 63.9
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.4e-15 86.7 43 88.4


User provided reference genes

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