Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 6.8e-207 723.8 373 100.0
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 2.1e-195 685.6 373 95.2
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 8.1e-184 647.1 373 89.3
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 4.0e-183 644.8 374 89.6
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 2.4e-159 565.8 375 79.7
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 4.1e-159 565.1 377 78.8
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 7.2e-156 554.3 373 78.0
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 4.6e-155 551.6 373 76.4
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.5e-145 520.0 373 73.7
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 2.2e-144 516.2 373 73.5
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 3.2e-132 475.7 376 67.6
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 3.7e-128 462.2 376 64.6
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 4.1e-127 458.8 377 65.0
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 6.5e-125 451.4 377 62.9
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 8.6e-125 451.1 378 63.8
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 7.2e-124 448.0 380 63.7
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 7.2e-124 448.0 379 64.1
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 6.8e-122 441.4 385 62.6
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 1.2e-121 440.7 377 62.6
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 3.4e-121 439.1 377 62.3
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 9.8e-121 437.6 377 62.3
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 8.3e-120 434.5 380 61.8
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.4e-119 433.7 380 62.6
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 5.4e-119 431.8 377 60.2
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 9.2e-119 431.0 380 60.0
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.5e-118 429.1 380 61.8
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 2.9e-117 426.0 376 57.4
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 5.0e-117 425.2 378 61.1
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.1e-116 424.1 378 61.1
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 1.6e-115 420.2 377 60.5
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 2.1e-115 419.9 377 59.4
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 8.0e-115 417.9 377 57.6
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 1.0e-114 417.5 380 61.1
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 1.5e-113 413.7 377 58.9
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 2.0e-113 413.3 377 58.9
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 3.4e-113 412.5 380 59.7
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 5.7e-113 411.8 377 58.6
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.3e-112 410.6 378 61.4
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.7e-112 410.2 378 58.2
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.9e-112 409.5 377 58.9
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 4.9e-112 408.7 377 58.9
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 2.4e-111 406.4 377 58.1
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.0e-109 401.0 373 59.5
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 1.3e-109 400.6 378 57.7
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.3e-109 400.6 377 58.1
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 1.7e-109 400.2 379 58.0
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 3.0e-109 399.4 381 58.3
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 3.0e-109 399.4 376 57.4
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 4.3e-108 395.6 373 56.6
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 5.6e-108 395.2 379 57.0
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 7.3e-108 394.8 376 58.0
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 2.8e-107 392.9 377 57.8
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 4.7e-107 392.1 313 68.1
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 3.1e-106 389.4 376 57.4
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 4.0e-106 389.0 377 59.2
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 3.4e-105 386.0 385 56.6
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 1.3e-104 384.0 373 56.3
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 2.9e-104 382.9 373 55.8
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 4.9e-104 382.1 380 55.5
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 6.4e-104 381.7 373 56.8
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 5.4e-103 378.6 381 55.1
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 7.0e-103 378.3 379 56.2
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 9.2e-103 377.9 382 55.0
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 4.6e-102 375.6 382 55.2
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.0e-101 374.4 397 53.4
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 2.3e-101 373.2 379 56.5
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 3.9e-101 372.5 380 54.7
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 6.6e-101 371.7 334 57.2
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 1.9e-100 370.2 373 54.4
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 1.9e-100 370.2 255 74.1
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.5e-100 369.8 382 53.9
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.5e-100 369.8 382 53.9
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 7.3e-100 368.2 385 53.2
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 9.5e-100 367.9 381 52.2
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 9.5e-100 367.9 382 54.2
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 1.6e-99 367.1 382 54.5
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 3.6e-99 365.9 381 53.5
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 6.2e-99 365.2 385 52.7
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 2.3e-98 363.2 381 53.0
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 1.2e-97 360.9 385 51.7
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 1.5e-97 360.5 393 53.4
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 1.5e-97 360.5 384 52.3
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 2.0e-97 360.1 405 50.6
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 2.0e-97 360.1 385 51.2
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 3.4e-97 359.4 378 54.2
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 8.3e-96 354.8 376 54.0
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 2.4e-95 353.2 390 51.0
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 2.1e-94 350.1 382 52.4
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 1.2e-91 340.9 377 53.1
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.9e-87 327.0 384 49.5
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 3.2e-87 326.2 385 47.8
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 7.1e-87 325.1 344 54.1
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 9.6e-84 314.7 281 59.4
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 1.9e-76 290.4 382 46.9
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.2e-65 254.6 257 55.3
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.3e-64 251.1 391 41.2
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 3.0e-61 240.0 388 38.9
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 5.1e-61 239.2 225 61.3
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.9e-60 237.3 199 59.8
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 2.5e-52 210.3 378 38.6
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.6e-49 200.3 166 62.0
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 6.5e-48 195.7 170 62.9
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 2.1e-46 190.7 178 57.3
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 8.8e-45 185.3 168 62.5
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 2.4e-42 177.2 376 34.6
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 6.9e-42 175.6 370 36.5
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 6.9e-42 175.6 233 44.2
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.1e-39 168.3 169 56.8
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 6.1e-38 162.5 279 38.0
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 6.3e-35 152.5 170 51.2
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 2.1e-30 137.5 159 49.7
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 2.7e-30 137.1 168 50.6
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 2.0e-28 131.0 157 46.5
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.8e-27 127.1 189 42.9
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 8.2e-27 125.6 189 42.3
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 4.2e-23 113.2 145 47.6
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.5e-15 87.4 165 32.1
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 3.2e-15 87.0 72 58.3
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.2e-15 85.9 109 45.0
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 9.4e-15 85.5 92 50.0
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 1.4e-13 81.6 439 25.7
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.4e-13 81.6 84 51.2
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 7.0e-10 69.3 82 45.1
Psat0s1013g0040 Pisum sativum HOM05D006028 ORTHO05D007784 7.0e-10 69.3 53 67.9
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.7e-09 65.9 84 45.2


User provided reference genes

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