Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 1.5e-181 639.8 438 100.0
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 7.3e-168 594.3 444 92.3
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 1.3e-161 573.5 443 92.8
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.2e-157 560.5 488 80.1
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 1.8e-153 546.6 440 84.3
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 1.1e-152 543.9 443 85.8
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 2.4e-150 536.2 439 84.3
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 7.6e-149 531.2 442 67.2
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 4.6e-146 521.9 449 83.1
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 7.9e-146 521.2 445 80.0
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 1.3e-145 520.4 445 83.8
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 1.8e-145 520.0 474 83.1
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 2.4e-142 509.6 445 78.4
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 3.4e-141 505.8 444 78.6
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 1.9e-139 500.0 438 85.8
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 1.2e-138 497.3 442 77.1
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 1.6e-138 496.9 440 76.4
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 1.6e-138 496.9 455 78.2
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.1e-138 496.5 439 68.1
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 1.8e-137 493.4 446 73.5
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 3.9e-137 492.3 446 80.3
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 6.7e-137 491.5 439 74.5
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 6.7e-137 491.5 454 71.4
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 8.8e-137 491.1 442 71.3
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.5e-136 490.3 440 82.5
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 1.5e-136 490.3 440 82.3
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 7.4e-136 488.0 442 76.2
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 3.7e-135 485.7 440 82.3
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 5.3e-134 481.9 442 73.8
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 9.1e-134 481.1 434 74.0
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 1.2e-133 480.7 442 65.8
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 4.5e-133 478.8 439 79.0
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 1.3e-132 477.2 442 74.7
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 1.7e-132 476.9 436 70.9
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 1.1e-131 474.2 438 76.5
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 1.4e-131 473.8 440 75.9
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 3.2e-131 472.6 442 76.9
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 7.2e-131 471.5 441 69.8
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 4.7e-130 468.8 526 67.3
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 7.9e-130 468.0 257 87.9
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 2.3e-129 466.5 257 88.7
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 3.9e-129 465.7 437 60.9
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 1.1e-128 464.2 439 69.2
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.3e-128 462.6 427 73.8
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 1.7e-127 460.3 442 76.5
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 1.7e-127 460.3 420 76.7
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.8e-127 458.8 431 74.7
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-126 457.6 433 73.0
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 1.1e-126 457.6 445 73.0
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 2.4e-126 456.4 259 86.9
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.1e-126 456.1 431 73.1
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 5.3e-126 455.3 432 68.5
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 2.6e-125 453.0 449 72.8
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 4.5e-125 452.2 468 67.1
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 4.5e-125 452.2 419 74.2
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 1.0e-124 451.1 439 75.9
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.9e-124 449.5 437 70.5
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 5.0e-124 448.7 439 74.9
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 5.0e-124 448.7 443 75.8
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 8.5e-124 448.0 439 73.3
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 1.5e-123 447.2 439 74.3
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 1.9e-123 446.8 441 71.7
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 2.5e-123 446.4 423 63.6
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 2.5e-123 446.4 441 66.7
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 5.5e-123 445.3 441 71.7
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 5.5e-123 445.3 488 55.3
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 3.6e-122 442.6 439 72.4
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-122 442.2 423 66.4
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.8e-121 440.3 420 57.6
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 5.2e-121 438.7 434 69.8
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 1.1e-120 437.6 441 66.9
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 2.6e-120 436.4 439 72.9
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 2.2e-119 433.3 235 86.4
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 2.8e-119 433.0 437 69.6
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 3.7e-119 432.6 427 75.6
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 6.3e-119 431.8 255 82.7
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 1.4e-118 430.6 251 82.9
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 7.0e-118 428.3 251 84.1
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 1.6e-117 427.2 438 68.3
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 2.0e-117 426.8 509 62.1
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 3.5e-117 426.0 431 55.7
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 2.2e-116 423.3 252 82.1
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 7.2e-115 418.3 252 81.3
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 4.7e-114 415.6 246 81.7
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 1.0e-113 414.5 435 65.1
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 3.0e-113 412.9 259 79.2
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 4.0e-113 412.5 249 81.5
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 5.2e-113 412.1 252 80.6
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 1.2e-112 411.0 252 80.2
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 2.6e-112 409.8 517 57.1
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 9.7e-112 407.9 509 56.6
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 2.2e-111 406.8 239 77.4
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 2.2e-111 406.8 239 77.4
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 3.7e-111 406.0 225 85.3
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 3.7e-111 406.0 252 76.2
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.8e-110 403.7 228 81.6
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 7.0e-110 401.7 259 74.9
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.2e-109 401.0 247 80.6
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 1.2e-109 401.0 247 80.6
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 2.2e-108 396.7 226 82.3
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 4.2e-107 392.5 252 77.4
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 1.0e-105 387.9 231 78.8
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 3.7e-103 379.4 387 79.1
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 1.7e-100 370.5 240 73.8
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 5.9e-93 345.5 388 69.1
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 5.0e-92 342.4 204 80.4
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.6e-85 320.9 155 91.6
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.1e-83 314.7 207 72.9
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 2.3e-81 307.0 149 90.6
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 6.4e-79 298.9 343 65.6
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 8.9e-73 278.5 137 89.1
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 6.6e-68 262.3 346 71.4
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.1e-67 261.5 144 84.7
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 4.3e-67 259.6 344 70.3
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 9.6e-67 258.5 297 86.9
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 3.6e-66 256.5 253 54.5
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 2.0e-64 250.8 146 82.2
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 8.4e-63 245.4 322 73.3
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.9e-62 244.2 353 64.0
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 3.2e-62 243.4 175 70.9
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 1.7e-60 237.7 295 77.6
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 3.3e-59 233.4 204 53.9
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 4.3e-59 233.0 218 51.4
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 1.6e-58 231.1 318 76.7
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.3e-55 221.5 323 52.6
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 2.1e-53 214.2 112 86.6
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 3.0e-52 210.3 325 56.0
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 7.3e-51 205.7 102 92.2
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 4.0e-49 199.9 195 57.4
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 4.5e-48 196.4 97 94.8
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 7.1e-46 189.1 96 85.4
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 3.0e-44 183.7 129 66.7
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 3.3e-43 180.3 105 81.9
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 2.4e-41 174.1 306 54.6
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 6.9e-41 172.6 97 82.5
Gohir.A11G193800 Gossypium hirsutum HOM05D004769 ORTHO05D005605 2.9e-39 167.2 86 91.9
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 7.1e-38 162.5 84 86.9
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 7.9e-37 159.1 83 85.5
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 2.5e-35 154.1 80 91.2
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 1.1e-33 148.7 80 88.8
MD01G1153700 Malus domestica HOM05D004769 ORTHO05D005605 5.3e-33 146.4 80 86.2
Gohir.A08G086562 Gossypium hirsutum HOM05D004769 ORTHO05D005605 7.9e-29 132.5 84 78.6
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.3e-28 131.7 262 62.6
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.7e-27 126.3 258 58.1
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 1.6e-26 124.8 77 79.2
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.0e-23 115.5 297 57.9
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 1.1e-22 112.1 74 71.6
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 4.2e-22 110.2 84 70.2
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 6.1e-21 106.3 68 72.1
HanXRQChr08g0224021 Helianthus annuus HOM05D004769 ORTHO05D005605 7.9e-21 105.9 60 85.0
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 1.5e-16 91.7 320 44.1
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 1.0e-15 89.0 79 54.4
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 5.5e-14 83.2 66 71.2
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 3.9e-12 77.0 43 83.7
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.1e-12 76.6 71 59.2


User provided reference genes

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