Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G172100 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 1.3e-85 319.7 167 100.0
Phvul.010G107200 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 3.9e-53 211.8 174 70.1
Phvul.008G070600 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 5.3e-26 121.7 118 64.4
VMungo1383G3620 Vigna mungo HOM05D003997 ORTHO05D002698 1.6e-22 110.2 116 60.3
Glyma.09G264400 Glycine max HOM05D003997 ORTHO05D002698 6.1e-22 108.2 170 48.2
Glyma.18G227500 Glycine max HOM05D003997 ORTHO05D002698 6.1e-22 108.2 170 48.2
Phvul.008G070900 Phaseolus vulgaris HOM05D003997 ORTHO05D002698 6.7e-21 104.8 118 60.2
Ca_12342_v3 Cicer arietinum L. HOM05D003997 ORTHO05D002698 1.7e-19 100.1 118 54.2
Lj2g0021502 Lotus japonicus HOM05D003997 ORTHO05D002698 1.8e-18 96.7 118 52.5
CANSAT35G1644 Cannabis sativa HOM05D003997 ORTHO05D002698 1.9e-15 86.7 118 47.5
Cfa020087 Carpinus fangiana HOM05D003997 ORTHO05D002698 5.5e-15 85.1 171 42.1
Lalb_Chr05g0221411 Lupinus albus HOM05D003997 ORTHO05D002698 7.2e-15 84.7 122 47.5
Cpa.g.sc17.105 Carica papaya HOM05D003997 ORTHO05D002698 2.1e-14 83.2 118 50.8
QL07p027111 Quercus lobata HOM05D003997 ORTHO05D002698 2.7e-14 82.8 172 40.7
Atru.chr8.1304 Acer truncatum HOM05D003997 ORTHO05D002698 6.1e-14 81.6 118 48.3
CiPaw.15G185300 Carya illinoinensis HOM05D003997 ORTHO05D002698 6.1e-14 81.6 118 45.8
Lalb_Chr16g0386841 Lupinus albus HOM05D003997 ORTHO05D002698 8.0e-14 81.3 122 46.7
QL03p055008 Quercus lobata HOM05D003997 ORTHO05D002698 8.0e-14 81.3 172 39.5
TPR.G30221 Trifolium pratense HOM05D003997 ORTHO05D002698 8.0e-14 81.3 81 58.0
AUR62015091 Chenopodium quinoa HOM05D003997 ORTHO05D002698 2.3e-13 79.7 121 47.1
Rhsim03G0061700 Rhododendron simsii HOM05D003997 ORTHO05D002698 3.0e-13 79.3 116 46.6
CiPaw.08G072600 Carya illinoinensis HOM05D003997 ORTHO05D002698 4.0e-13 79.0 118 44.9
RhsimUnG0113000 Rhododendron simsii HOM05D003997 ORTHO05D002698 4.0e-13 79.0 111 46.8
Actinidia37765 Actinidia chinensis HOM05D003997 ORTHO05D002698 5.2e-13 78.6 118 45.8
AUR62017549 Chenopodium quinoa HOM05D003997 ORTHO05D002698 5.2e-13 78.6 121 46.3
Ciclev10013709m.g Citrus clementina HOM05D003997 ORTHO05D002698 6.7e-13 78.2 170 41.8
Rhsim03G0061200 Rhododendron simsii HOM05D003997 ORTHO05D002698 6.7e-13 78.2 116 45.7
Hma1.2p1_2082F.1_g313570 Hydrangea macrophylla HOM05D003997 ORTHO05D002698 8.8e-13 77.8 118 45.8
Medtr1g040020 Medicago truncatula HOM05D003997 ORTHO05D002698 8.8e-13 77.8 118 46.6
Potri.016G067100 Populus trichocarpa HOM05D003997 ORTHO05D002698 1.5e-12 77.0 172 39.5
Prupe.7G091500 Prunus persica HOM05D003997 ORTHO05D002698 2.6e-12 76.3 118 45.8
vmacro07504 Vaccinium macrocarpon HOM05D003997 ORTHO05D002698 3.3e-12 75.9 116 44.8
Cc06_g06830 Coffea canephora HOM05D003997 ORTHO05D002698 4.4e-12 75.5 118 44.1
GSVIVG01022501001 Vitis vinifera HOM05D003997 ORTHO05D002698 5.7e-12 75.1 118 46.6
Eucgr.H00426 Eucalyptus grandis HOM05D003997 ORTHO05D002698 9.7e-12 74.3 118 44.1
EL10Ac7g16269 Beta vulgaris HOM05D003997 ORTHO05D002698 1.3e-11 73.9 120 43.3
Nn2g14387 Nelumbo nucifera HOM05D003997 ORTHO05D002698 1.7e-11 73.6 117 46.2
Sabra16G0068400 Salix brachista HOM05D003997 ORTHO05D002698 1.7e-11 73.6 172 39.0
DCAR_013448 Daucus carota HOM05D003997 ORTHO05D002698 2.2e-11 73.2 181 36.5
Lj3A736G17 Lonicera japonica HOM05D003997 ORTHO05D002698 2.2e-11 73.2 171 38.0
MD12G1043400 Malus domestica HOM05D003997 ORTHO05D002698 2.2e-11 73.2 118 44.9
TWI53G0181 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 2.8e-11 72.8 184 37.0
MD14G1042400 Malus domestica HOM05D003997 ORTHO05D002698 3.7e-11 72.4 118 44.1
Dinv25067 Davidia involucrata HOM05D003997 ORTHO05D002698 4.8e-11 72.0 118 43.2
Psat6g101760 Pisum sativum HOM05D003997 ORTHO05D002698 4.8e-11 72.0 118 47.5
Thecc.05G108200 Theobroma cacao HOM05D003997 ORTHO05D002698 4.8e-11 72.0 172 37.8
Migut.L01852 Erythranthe guttata HOM05D003997 ORTHO05D002698 6.3e-11 71.6 116 44.0
Migut.O00931 Erythranthe guttata HOM05D003997 ORTHO05D002698 6.3e-11 71.6 116 44.0
Gohir.A01G200200 Gossypium hirsutum HOM05D003997 ORTHO05D002698 6.3e-11 71.6 118 44.1
Gohir.D01G190300 Gossypium hirsutum HOM05D003997 ORTHO05D002698 6.3e-11 71.6 118 44.1
Gorai.002G234000 Gossypium raimondii HOM05D003997 ORTHO05D002698 6.3e-11 71.6 118 44.1
SGA_v2.0_scaffold392G50675 Striga asiatica HOM05D003997 ORTHO05D002698 6.3e-11 71.6 116 44.0
Gohir.A09G132800 Gossypium hirsutum HOM05D003997 ORTHO05D002698 8.2e-11 71.2 116 44.8
Duzib128G1254 Durio zibethinus HOM05D003997 ORTHO05D002698 1.1e-10 70.9 118 43.2
RcHm_v2.0_Chr3g0476631 Rosa chinensis HOM05D003997 ORTHO05D002698 1.8e-10 70.1 118 44.1
COL.COLO4_29520 Corchorus olitorius HOM05D003997 ORTHO05D002698 2.4e-10 69.7 118 42.4
RcHm_v2.0_Chr7g0223381 Rosa chinensis HOM05D003997 ORTHO05D002698 3.1e-10 69.3 118 44.1
ClCG01G012560 Citrullus lanatus HOM05D003997 ORTHO05D002698 4.1e-10 68.9 119 45.4
Manes.08G035900 Manihot esculenta HOM05D003997 ORTHO05D002698 5.3e-10 68.6 118 44.9
MSTRG.10419 Avicennia marina HOM05D003997 ORTHO05D002698 9.1e-10 67.8 116 41.4
FvH4_6g20730 Fragaria vesca HOM05D003997 ORTHO05D002698 9.1e-10 67.8 118 43.2
FAN02G0475 Fragaria x ananassa HOM05D003997 ORTHO05D002698 9.1e-10 67.8 118 43.2
FAN05G3201 Fragaria x ananassa HOM05D003997 ORTHO05D002698 9.1e-10 67.8 118 43.2
FAN14G5955 Fragaria x ananassa HOM05D003997 ORTHO05D002698 9.1e-10 67.8 118 43.2
TAR623G1175 Trochodendron aralioides HOM05D003997 ORTHO05D002698 9.1e-10 67.8 119 42.9
Nitab4.5_0000082g0420 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.6e-09 67.0 118 41.5
Nitab4.5_0009392g0020 Nicotiana tabacum HOM05D003997 ORTHO05D002698 1.6e-09 67.0 118 41.5
TWI74G0953 Tripterygium wilfordii HOM05D003997 ORTHO05D002698 1.6e-09 67.0 118 41.5
Ah.15g098860 Amaranthus hybridus HOM05D003997 ORTHO05D002698 2.0e-09 66.6 120 40.0
Oeu020171.1 Olea europaea HOM05D003997 ORTHO05D002698 2.7e-09 66.2 118 42.4
BraA06t25868Z Brassica rapa HOM05D003997 ORTHO05D002698 3.5e-09 65.9 118 41.5
Prupe.7G027600 Prunus persica HOM05D003997 ORTHO05D002698 3.5e-09 65.9 118 38.1
Sed0019356 Sechium edule HOM05D003997 ORTHO05D002698 3.5e-09 65.9 118 42.4
Sc06g0010610 Simmondsia chinensis HOM05D003997 ORTHO05D002698 4.5e-09 65.5 172 36.0
ATR0730G052 Amborella trichopoda HOM05D003997 ORTHO05D002698 1.0e-08 64.3 121 43.0
Solyc04g017680.3 Solanum lycopersicum HOM05D003997 ORTHO05D002698 1.0e-08 64.3 118 41.5
CSS0008111 Camellia sinensis var. sinensis HOM05D003997 ORTHO05D002698 1.3e-08 63.9 182 35.2
CSS0023244 Camellia sinensis var. sinensis HOM05D003997 ORTHO05D002698 1.3e-08 63.9 182 35.2
Sopen04g008760 Solanum pennellii HOM05D003997 ORTHO05D002698 1.7e-08 63.5 118 40.7
BcaB02g09651 Brassica carinata HOM05D003997 ORTHO05D002698 2.2e-08 63.2 118 39.0
SalBow5G1795 Salvia bowleyana HOM05D003997 ORTHO05D002698 2.2e-08 63.2 173 35.3
Haze_20104 Corylus avellana HOM05D003997 ORTHO05D002698 2.9e-08 62.8 165 36.4
PGR142G0313 Punica granatum HOM05D003997 ORTHO05D002698 3.8e-08 62.4 111 41.4
Aqoxy4G00923 Aquilegia oxysepala HOM05D003997 ORTHO05D002698 8.5e-08 61.2 118 41.5
Gorai.006G147800 Gossypium raimondii HOM05D003997 ORTHO05D002698 8.5e-08 61.2 117 41.0
Nitab4.5_0014391g0010 Nicotiana tabacum HOM05D003997 ORTHO05D002698 8.5e-08 61.2 118 40.7
THA.LOC109116862 Tarenaya hassleriana HOM05D003997 ORTHO05D002698 1.1e-07 60.8 118 41.5
AL1G60620 Arabidopsis lyrata HOM05D003997 ORTHO05D002698 1.5e-07 60.5 118 39.8
AT1G52370 Arabidopsis thaliana HOM05D003997 ORTHO05D002698 1.5e-07 60.5 118 39.8
AT4G28360 Arabidopsis thaliana HOM05D003997 ORTHO05D002698 1.9e-07 60.1 118 39.8
BolC2t12279H Brassica oleracea HOM05D003997 ORTHO05D002698 1.9e-07 60.1 118 39.0
CARHR236070 Cardamine hirsuta HOM05D003997 ORTHO05D002698 1.9e-07 60.1 116 41.4
Peaxi162Scf00002g03712 Petunia axillaris HOM05D003997 ORTHO05D002698 1.9e-07 60.1 118 40.7
A02p42340 Brassica napus HOM05D003997 ORTHO05D002698 2.5e-07 59.7 118 38.1
C02p62220 Brassica napus HOM05D003997 ORTHO05D002698 2.5e-07 59.7 118 38.1
BraA02t09164Z Brassica rapa HOM05D003997 ORTHO05D002698 2.5e-07 59.7 118 38.1
Carub.0007s1240 Capsella rubella HOM05D003997 ORTHO05D002698 2.5e-07 59.7 118 39.8
MELO3C004760.2 Cucumis melo HOM05D003997 ORTHO05D002698 2.5e-07 59.7 119 41.2
Aa31LG11G1160 Aethionema arabicum HOM05D003997 ORTHO05D002698 3.2e-07 59.3 118 40.7
Aqoxy1G01867 Aquilegia oxysepala HOM05D003997 ORTHO05D002698 3.2e-07 59.3 118 39.8
MD06G1011100 Malus domestica HOM05D003997 ORTHO05D002698 3.2e-07 59.3 118 37.3
BcaB07g29840 Brassica carinata HOM05D003997 ORTHO05D002698 4.2e-07 58.9 118 39.8
BolC3t18692H Brassica oleracea HOM05D003997 ORTHO05D002698 4.2e-07 58.9 118 39.0
Carub.0001s4137 Capsella rubella HOM05D003997 ORTHO05D002698 4.2e-07 58.9 118 39.8
Nitab4.5_0021549g0010 Nicotiana tabacum HOM05D003997 ORTHO05D002698 4.2e-07 58.9 117 40.2
unitig_8.g3554 Utricularia gibba HOM05D003997 ORTHO05D002698 4.2e-07 58.9 104 43.3
BcaC01g02477 Brassica carinata HOM05D003997 ORTHO05D002698 5.5e-07 58.5 118 39.0
C03p64380 Brassica napus HOM05D003997 ORTHO05D002698 5.5e-07 58.5 118 39.0
HanXRQChr17g0562561 Helianthus annuus HOM05D003997 ORTHO05D002698 5.5e-07 58.5 118 39.8
Lsat_1_v5_gn_4_40160 Lactuca sativa HOM05D003997 ORTHO05D002698 5.5e-07 58.5 118 39.8
Sp2g25660 Schrenkiella parvula HOM05D003997 ORTHO05D002698 5.5e-07 58.5 118 39.0
BcaC03g18154 Brassica carinata HOM05D003997 ORTHO05D002698 7.2e-07 58.2 118 37.3
BcaC03g18159 Brassica carinata HOM05D003997 ORTHO05D002698 7.2e-07 58.2 118 37.3
Thhalv10003962m.g Eutrema salsugineum HOM05D001982 ORTHO05D003938 7.2e-07 58.2 118 38.1
MBI19_g30302_MAGBIO Magnolia biondii HOM05D003997 ORTHO05D002698 7.2e-07 58.2 149 36.2
Rhsim03G0061600 Rhododendron simsii HOM05D003997 ORTHO05D002698 7.2e-07 58.2 57 57.9
CsaV3_1G014590 Cucumis sativus L. HOM05D003997 ORTHO05D002698 9.4e-07 57.8 119 39.5
arahy.Tifrunner.gnm1.ann1.RXW997 Arachis hypogaea HOM05D003997 ORTHO05D002698 1.6e-06 57.0 132 39.4
Os01g0616500 Oryza sativa ssp. japonica HOM05D003997 ORTHO05D002698 1.6e-06 57.0 182 34.1
arahy.Tifrunner.gnm1.ann1.2ECS7R Arachis hypogaea HOM05D003997 ORTHO05D002698 3.6e-06 55.8 118 39.8
arahy.Tifrunner.gnm1.ann1.4C6UH4 Arachis hypogaea HOM05D003997 ORTHO05D002698 3.6e-06 55.8 118 39.8
arahy.Tifrunner.gnm1.ann1.7B1PRD Arachis hypogaea HOM05D003997 ORTHO05D002698 3.6e-06 55.8 118 39.8
arahy.Tifrunner.gnm1.ann1.RN4U32 Arachis hypogaea HOM05D003997 ORTHO05D002698 3.6e-06 55.8 118 39.8
arahy.Tifrunner.gnm1.ann1.W16VAI Arachis hypogaea HOM05D003997 ORTHO05D002698 3.6e-06 55.8 118 39.8
arahy.Tifrunner.gnm1.ann1.ZAYD4R Arachis hypogaea HOM05D003997 ORTHO05D002698 3.6e-06 55.8 118 39.8
CARHR060900 Cardamine hirsuta HOM05D003997 ORTHO05D002698 6.1e-06 55.1 118 39.8
ECA234G3695 Erigeron canadensis HOM05D003997 ORTHO05D002698 6.1e-06 55.1 118 38.1
Zm00001eb095190 Zea mays HOM05D003997 ORTHO05D002698 8.0e-06 54.7 182 34.1


User provided reference genes

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