Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 4.1e-291 1004.6 753 100.0
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.2e-255 886.7 758 91.7
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 1.3e-225 786.9 809 80.1
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 1.2e-221 773.9 808 80.8
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 3.1e-174 616.3 734 73.2
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 6.5e-164 582.0 515 70.5
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 3.9e-153 546.2 524 67.6
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 2.8e-151 540.0 784 68.2
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.4e-145 521.2 524 63.7
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 5.9e-141 505.8 762 58.4
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 4.0e-137 493.0 765 68.5
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 5.2e-137 492.7 757 58.5
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.5e-131 473.8 358 79.1
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 3.7e-127 459.9 753 54.8
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 3.5e-125 453.4 519 60.1
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 7.7e-125 452.2 761 63.5
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.8e-124 449.9 524 56.5
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 4.3e-123 446.4 523 45.7
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 1.2e-122 444.9 483 61.1
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 2.1e-122 444.1 773 64.8
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 3.0e-121 440.3 756 63.8
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 5.2e-121 439.5 537 56.1
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 6.8e-121 439.1 537 56.1
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.2e-120 438.3 758 64.8
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 3.4e-120 436.8 761 64.9
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 7.5e-120 435.6 436 52.5
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 2.2e-119 434.1 761 65.0
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.8e-118 431.0 497 55.9
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 2.4e-118 430.6 540 55.9
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 2.4e-118 430.6 539 55.8
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 7.0e-118 429.1 513 52.2
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.2e-117 428.3 698 67.0
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 1.0e-116 425.2 475 58.1
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 6.6e-116 422.5 462 58.0
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 8.6e-116 422.2 749 66.0
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.1e-115 421.8 513 55.8
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.3e-115 420.2 551 54.4
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 1.2e-114 418.3 505 57.0
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.6e-114 417.9 666 66.2
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 2.1e-114 417.5 390 66.2
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 2.1e-114 417.5 690 65.8
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 6.2e-114 416.0 502 46.4
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 2.3e-113 414.1 476 55.9
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 6.8e-113 412.5 414 63.3
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 6.8e-113 412.5 760 63.7
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 8.9e-113 412.1 455 58.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.2e-112 411.8 458 59.0
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 1.5e-112 411.4 474 56.3
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.5e-112 411.4 461 56.8
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 2.0e-112 411.0 542 50.4
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 3.4e-112 410.2 414 63.8
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.4e-112 410.2 382 61.8
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 5.8e-112 409.5 540 50.2
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 9.8e-112 408.7 414 60.4
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 3.7e-111 406.8 485 55.1
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 4.9e-111 406.4 650 68.9
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 8.3e-111 405.6 773 58.0
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.1e-110 405.2 613 71.3
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.4e-110 404.8 761 61.2
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 1.9e-110 404.4 761 61.2
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 4.1e-110 403.3 606 64.0
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 4.1e-110 403.3 476 56.3
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 7.0e-110 402.5 540 53.7
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 9.2e-110 402.1 439 62.0
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 2.0e-109 401.0 607 72.5
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 7.8e-109 399.1 447 61.7
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 7.8e-109 399.1 449 58.1
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 8.6e-108 395.6 519 54.3
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.5e-107 394.8 562 78.8
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.6e-107 392.9 363 66.4
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 7.3e-107 392.5 437 56.5
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.5e-104 384.8 500 51.2
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 2.0e-104 384.4 339 68.4
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 9.8e-104 382.1 467 55.7
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.3e-103 381.7 498 50.8
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 3.7e-103 380.2 513 50.9
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.4e-102 377.5 613 63.6
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 4.1e-102 376.7 364 62.6
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 7.1e-102 375.9 554 49.3
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.6e-101 373.2 549 49.9
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.6e-101 373.2 549 49.9
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 6.6e-100 369.4 367 64.0
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 3.3e-99 367.1 426 57.3
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 7.3e-99 365.9 555 74.1
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 2.8e-98 364.0 361 63.7
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 4.7e-98 363.2 357 65.0
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 5.2e-97 359.8 369 56.1
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 2.6e-96 357.5 356 58.7
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 1.3e-95 355.1 331 65.3
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 8.4e-95 352.4 359 63.0
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 9.2e-94 349.0 413 59.8
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 9.2e-94 349.0 413 59.8
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 6.0e-93 346.3 309 69.9
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 6.0e-93 346.3 378 60.1
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 5.1e-92 343.2 479 51.6
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 6.6e-92 342.8 413 59.8
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 2.5e-91 340.9 389 60.9
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 3.6e-90 337.0 389 60.7
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 4.7e-90 336.7 408 55.4
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 7.8e-85 319.3 383 60.3
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.7e-84 318.2 457 51.2
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 1.3e-74 285.4 201 69.7
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 9.3e-62 242.7 399 39.1
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 5.9e-56 223.4 300 43.3
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.3e-51 207.6 202 53.5
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.4e-49 202.2 304 41.8
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 2.1e-45 188.3 366 40.7
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 3.0e-44 184.5 383 45.4
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.7e-34 152.1 373 44.0
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 2.2e-26 125.2 170 38.2
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 6.5e-23 113.6 198 62.6
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 1.6e-21 109.0 143 42.7
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.4e-20 105.9 62 77.4
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.6e-08 65.9 57 57.9


User provided reference genes

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