Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.8e-274 947.2 470 100.0
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 4.3e-222 774.6 457 83.6
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 3.7e-202 708.4 444 78.2
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.4e-201 706.4 478 74.1
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 7.3e-198 694.1 364 93.4
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 6.8e-196 687.6 422 78.0
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 7.8e-192 674.1 451 73.6
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 8.7e-191 670.6 458 72.5
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.6e-190 667.9 418 78.0
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 1.4e-185 653.3 394 79.9
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 2.2e-178 629.4 400 77.2
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.4e-172 610.1 509 62.9
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.5e-163 580.1 474 62.2
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.2e-160 570.5 414 66.7
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.2e-160 570.5 475 60.6
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 6.3e-157 558.1 440 62.5
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.4e-156 557.0 451 60.5
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 9.0e-156 554.3 425 62.4
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.2e-155 553.9 477 59.3
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 3.4e-155 552.4 431 61.3
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 5.0e-154 548.5 440 60.0
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.4e-153 547.0 486 57.6
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 2.5e-153 546.2 438 61.4
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 4.6e-152 542.0 548 54.0
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 1.8e-151 540.0 494 56.1
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 8.8e-151 537.7 423 60.5
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 1.1e-150 537.3 430 60.9
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.5e-150 536.2 417 61.9
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 3.3e-150 535.8 424 61.1
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 3.3e-150 535.8 470 57.4
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 7.4e-150 534.6 446 57.6
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.3e-149 533.9 422 59.5
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 3.7e-149 532.3 424 61.3
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 8.2e-149 531.2 478 56.5
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.1e-148 530.8 461 59.2
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 2.4e-148 529.6 457 57.5
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 3.1e-148 529.3 423 61.2
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 4.1e-148 528.9 467 56.3
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 2.0e-147 526.6 420 61.2
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 2.6e-147 526.2 448 58.5
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 3.4e-147 525.8 443 59.8
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 3.4e-147 525.8 471 57.3
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 5.9e-147 525.0 451 58.1
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 7.7e-147 524.6 479 55.1
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 7.7e-147 524.6 434 58.8
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.0e-146 524.2 397 64.7
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.7e-146 523.5 481 55.5
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 2.2e-146 523.1 432 60.2
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 2.9e-146 522.7 459 56.9
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 3.8e-146 522.3 415 61.4
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 6.5e-146 521.5 430 59.5
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 6.5e-146 521.5 440 58.6
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 8.5e-146 521.2 451 58.3
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.9e-145 520.0 451 57.9
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.9e-145 520.0 479 54.5
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.5e-145 519.6 436 59.2
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 3.2e-145 519.2 451 58.1
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.2e-145 519.2 418 60.0
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.4e-145 517.7 472 56.4
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 1.2e-144 517.3 437 58.8
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.2e-144 517.3 453 57.6
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 3.6e-144 515.8 424 59.2
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 4.7e-144 515.4 465 56.3
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 4.7e-144 515.4 418 60.3
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 3.9e-143 512.3 419 58.5
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 2.0e-142 510.0 449 57.0
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 5.7e-142 508.4 430 58.6
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.8e-140 503.4 419 59.4
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 5.3e-140 501.9 474 54.2
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.1e-140 501.1 466 54.1
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.2e-139 500.7 461 54.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.5e-139 500.4 492 54.1
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.0e-139 500.0 402 59.7
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 4.5e-139 498.8 418 58.4
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 5.9e-139 498.4 460 54.8
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.7e-138 496.9 499 52.1
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.4e-137 493.8 396 59.3
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.9e-137 493.4 419 56.8
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.1e-134 484.2 447 55.7
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.7e-133 480.3 466 53.9
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 4.8e-133 478.8 443 54.4
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 3.1e-132 476.1 430 55.1
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 5.3e-132 475.3 466 52.6
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 9.1e-132 474.6 447 53.9
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.2e-128 464.2 421 55.8
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.6e-128 463.8 419 57.3
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.3e-127 459.9 425 53.6
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 4.4e-126 455.7 362 60.5
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 3.7e-125 452.6 367 59.7
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.4e-124 449.9 371 58.5
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 1.2e-123 447.6 367 57.2
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 3.5e-123 446.0 422 52.8
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 7.7e-115 418.3 408 51.5
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.5e-113 412.1 461 47.5
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.6e-105 385.6 432 49.1
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 9.8e-102 374.8 382 53.9
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-100 371.3 432 47.5
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 2.1e-96 357.1 422 43.1
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.8e-96 356.7 466 41.2
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.4e-95 354.4 278 62.2
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 3.2e-92 343.2 413 42.4
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.1e-87 328.2 390 47.4
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.1e-87 328.2 395 44.1
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.8e-83 312.0 293 52.6
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.4e-78 296.6 221 63.3
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 9.3e-68 261.9 246 54.9
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.6e-64 251.1 203 62.1
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 4.8e-64 249.6 253 53.0
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 6.7e-50 202.6 447 32.2
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.9e-49 201.1 115 81.7
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.9e-47 192.6 220 47.3
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 7.4e-41 172.6 450 30.9
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 3.6e-35 153.7 105 69.5
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.5e-33 148.3 100 67.0
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 2.8e-32 144.1 100 67.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 8.2e-32 142.5 429 29.4
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.5e-28 129.8 90 72.2
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.1e-27 126.3 116 50.9
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.7e-25 119.8 93 61.3
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.8e-23 114.8 88 64.8
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 2.6e-22 110.9 69 76.8
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.4e-15 88.6 90 44.4
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.5e-12 77.8 69 52.2
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 4.7e-11 73.6 57 66.7
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.8e-10 69.7 51 60.8
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 5.7e-09 66.6 58 60.3
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 1.3e-08 65.5 440 24.5


User provided reference genes

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