Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 4.5e-83 311.2 157 100.0
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 1.9e-57 226.1 156 76.9
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 6.1e-48 194.5 152 67.1
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 5.9e-43 177.9 153 62.7
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 1.0e-42 177.2 154 59.7
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 2.0e-38 162.9 154 59.1
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 8.8e-31 137.5 152 50.0
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 5.7e-30 134.8 152 51.3
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.2e-27 127.1 152 46.1
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 2.0e-27 126.3 156 44.9
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 5.9e-27 124.8 154 48.1
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 1.7e-26 123.2 153 44.4
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.2e-26 122.9 156 46.8
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 2.2e-26 122.9 152 44.7
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 5.0e-26 121.7 152 46.7
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 6.5e-26 121.3 156 46.2
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 6.5e-26 121.3 153 43.8
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 1.9e-25 119.8 152 46.1
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 2.5e-25 119.4 156 44.9
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 2.5e-25 119.4 151 45.0
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 5.5e-25 118.2 155 46.5
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 7.2e-25 117.9 152 41.4
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 7.2e-25 117.9 156 43.6
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 9.4e-25 117.5 152 42.1
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.2e-24 117.1 151 45.0
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 2.1e-24 116.3 157 44.6
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.1e-24 116.3 152 43.4
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 4.7e-24 115.2 154 40.9
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 8.0e-24 114.4 152 46.1
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 1.0e-23 114.0 155 40.6
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.4e-23 113.6 154 43.5
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 2.3e-23 112.8 153 39.2
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 6.8e-23 111.3 152 41.4
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 6.8e-23 111.3 152 42.8
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 8.8e-23 110.9 155 45.8
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 8.8e-23 110.9 141 48.2
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 1.2e-22 110.5 135 44.4
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.2e-22 110.5 140 45.0
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.4e-22 109.0 148 40.5
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 4.4e-22 108.6 133 40.6
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 4.4e-22 108.6 150 42.7
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.7e-22 108.2 148 40.5
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 5.7e-22 108.2 148 40.5
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 7.5e-22 107.8 156 44.2
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 7.5e-22 107.8 154 40.9
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 7.5e-22 107.8 139 43.9
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 9.8e-22 107.5 152 42.1
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 3.7e-21 105.5 152 40.1
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 3.7e-21 105.5 152 40.8
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.4e-20 103.6 152 43.4
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 3.1e-20 102.4 125 46.4
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 4.1e-20 102.1 155 39.4
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 4.1e-20 102.1 154 39.0
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 4.1e-20 102.1 152 41.4
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 4.1e-20 102.1 152 41.4
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 7.0e-20 101.3 161 39.8
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 7.0e-20 101.3 141 41.1
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 1.2e-19 100.5 153 40.5
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 2.0e-19 99.8 161 40.4
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 2.0e-19 99.8 161 40.4
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 2.0e-19 99.8 161 40.4
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 2.0e-19 99.8 161 41.0
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 2.0e-19 99.8 160 39.4
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 3.5e-19 99.0 135 40.7
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 5.9e-19 98.2 161 40.4
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 5.9e-19 98.2 141 37.6
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 5.9e-19 98.2 161 39.1
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 5.9e-19 98.2 152 34.9
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 7.7e-19 97.8 155 40.0
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 1.3e-18 97.1 152 38.2
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.7e-18 96.7 160 40.0
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 2.3e-18 96.3 167 37.1
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 2.9e-18 95.9 154 39.6
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 2.9e-18 95.9 154 39.6
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 3.8e-18 95.5 159 36.5
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 3.8e-18 95.5 152 34.2
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 6.5e-18 94.7 137 37.2
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 6.5e-18 94.7 133 38.3
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 8.6e-18 94.4 159 39.6
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 8.6e-18 94.4 153 39.2
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 1.1e-17 94.0 137 37.2
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 1.1e-17 94.0 137 37.2
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.5e-17 93.6 156 35.9
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 5.5e-17 91.7 152 36.2
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 2.8e-16 89.4 140 40.0
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 2.8e-16 89.4 155 38.1
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 4.7e-16 88.6 134 41.8
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.0e-15 87.4 144 38.9
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.8e-15 86.7 155 36.8
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.8e-15 86.7 144 38.9
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 4.0e-15 85.5 159 35.2
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 4.0e-15 85.5 135 37.0
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 2.0e-14 83.2 137 37.2
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 2.0e-14 83.2 84 51.2
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 7.5e-14 81.3 175 33.1
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.7e-13 80.1 144 37.5
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 1.8e-12 76.6 135 34.8
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 2.0e-11 73.2 152 34.2
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.3e-10 70.5 155 32.9
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 4.3e-09 65.5 86 38.4
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 2.8e-08 62.8 102 40.2
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 3.0e-07 59.3 138 30.4
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 4.0e-07 58.9 89 43.8
C09p48620 Brassica napus HOM05D004059 ORTHO05D004591 1.5e-06 57.0 118 33.9
BcaC04g20035 Brassica carinata HOM05D004059 ORTHO05D004591 2.6e-06 56.2 118 33.9
BraA02t05954Z Brassica rapa HOM05D004059 ORTHO05D004591 3.4e-06 55.8 116 34.5
Sp6g18670 Schrenkiella parvula HOM05D004059 ORTHO05D004591 3.4e-06 55.8 85 41.2
BcaB08g36035 Brassica carinata HOM05D004059 ORTHO05D004591 4.4e-06 55.5 118 32.2
BolC9t57704H Brassica oleracea HOM05D004059 ORTHO05D004591 4.4e-06 55.5 111 36.0
A02p08850 Brassica napus HOM05D004059 ORTHO05D004591 7.5e-06 54.7 122 32.8
BcaC03g14194 Brassica carinata HOM05D004059 ORTHO05D004591 9.8e-06 54.3 122 33.6
C02p14760 Brassica napus HOM05D004059 ORTHO05D004591 9.8e-06 54.3 122 33.6
BolC2t07605H Brassica oleracea HOM05D004059 ORTHO05D004591 9.8e-06 54.3 122 33.6


User provided reference genes

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