Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 3.7e-247 857.8 461 100.0
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 8.9e-241 836.6 461 97.6
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.7e-231 805.8 461 91.8
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 6.4e-231 803.9 461 93.1
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 1.5e-227 792.7 464 91.2
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.0e-224 782.3 462 88.5
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 3.5e-221 771.5 461 86.8
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 1.0e-220 770.0 461 87.2
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.3e-220 769.6 465 89.9
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 1.9e-219 765.8 465 89.5
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 1.4e-217 759.6 461 85.5
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.2e-215 752.3 441 88.4
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.1e-211 740.0 461 81.3
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 2.8e-210 735.3 461 84.2
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 6.3e-210 734.2 461 82.0
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.1e-209 733.4 461 83.7
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 1.4e-209 733.0 462 83.3
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.0e-207 726.9 468 82.1
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.7e-207 726.1 461 78.5
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 8.4e-207 723.8 461 80.9
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.8e-204 716.1 461 79.4
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.8e-204 716.1 461 78.7
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 3.9e-204 714.9 462 79.0
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 8.7e-204 713.8 461 78.7
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 8.7e-204 713.8 469 81.9
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.1e-203 713.4 463 79.9
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 3.3e-203 711.8 462 82.5
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 2.8e-202 708.8 460 83.5
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.8e-202 708.0 461 79.6
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 8.2e-202 707.2 466 78.5
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.4e-201 706.4 461 79.6
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 9.0e-201 703.7 466 80.3
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.2e-200 703.4 461 77.0
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 1.5e-200 703.0 462 80.1
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 1.5e-200 703.0 461 78.1
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 3.4e-200 701.8 461 77.4
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 5.9e-200 701.0 466 78.1
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.0e-199 700.3 462 79.7
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 2.9e-199 698.7 461 77.7
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 6.5e-199 697.6 461 77.4
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 1.1e-198 696.8 461 77.0
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.9e-198 696.0 461 77.2
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 3.2e-198 695.3 464 77.4
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 5.5e-198 694.5 461 80.0
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 1.4e-196 689.9 462 76.2
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 2.3e-196 689.1 426 82.2
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 3.9e-196 688.3 426 82.2
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.1e-195 686.8 447 81.2
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 3.3e-195 685.3 488 75.2
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 3.3e-195 685.3 461 77.0
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 9.7e-195 683.7 459 76.0
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.3e-194 683.3 469 77.0
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 2.2e-194 682.6 468 77.6
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.4e-193 679.1 461 75.5
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 3.1e-193 678.7 462 76.4
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.2e-192 676.8 464 76.7
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 2.6e-192 675.6 456 77.2
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 2.6e-192 675.6 461 74.6
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.0e-191 673.7 469 75.7
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.2e-191 672.5 464 75.4
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 3.8e-191 671.8 461 76.1
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 6.5e-191 671.0 461 73.8
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.9e-190 669.5 464 74.8
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.5e-190 669.1 468 73.5
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 5.5e-190 667.9 464 74.6
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.6e-189 666.4 464 75.9
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.1e-189 666.0 459 75.4
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 3.6e-189 665.2 468 75.0
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 4.7e-189 664.8 467 74.5
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 6.1e-189 664.5 481 71.5
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 7.9e-189 664.1 464 75.2
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 7.9e-189 664.1 464 75.2
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 7.9e-189 664.1 464 75.2
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.0e-188 663.7 464 75.2
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 1.8e-188 662.9 464 73.1
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 2.3e-188 662.5 464 75.2
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.3e-188 662.5 465 77.6
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.3e-188 662.5 463 75.6
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 3.9e-188 661.8 464 73.9
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 1.1e-187 660.2 446 76.0
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.5e-187 659.8 468 76.3
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.2e-186 656.0 463 74.9
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 2.8e-186 655.6 509 68.2
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 2.8e-186 655.6 469 72.5
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 4.8e-186 654.8 465 74.4
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 4.8e-186 654.8 465 74.2
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 8.2e-186 654.1 467 74.5
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 1.1e-185 653.7 465 74.2
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.4e-185 652.5 465 77.2
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 1.6e-184 649.8 494 70.9
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 1.6e-184 649.8 468 74.8
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 2.0e-184 649.4 462 73.4
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 3.5e-184 648.7 468 74.8
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 2.9e-183 645.6 468 74.4
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.5e-182 643.3 489 70.3
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 4.2e-182 641.7 403 78.2
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 2.1e-181 639.4 419 76.4
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 2.2e-178 629.4 419 74.9
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 8.2e-178 627.5 461 71.6
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 2.4e-177 625.9 441 72.1
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 7.0e-177 624.4 470 70.2
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 2.9e-175 619.0 399 76.2
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.2e-174 615.1 465 68.6
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 7.5e-171 604.4 444 70.5
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 1.8e-169 599.7 462 67.1
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.1e-166 590.5 420 69.5
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 1.2e-165 587.0 465 68.2
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 2.7e-165 585.9 415 73.3
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 8.8e-164 580.9 450 66.2
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 2.4e-161 572.8 399 73.2
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 6.4e-146 521.5 382 72.8
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 6.0e-144 515.0 316 81.6
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 8.6e-143 511.1 399 62.9
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 7.1e-137 491.5 411 60.8
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 8.1e-133 478.0 401 58.4
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.5e-115 420.6 418 53.3
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.3e-102 376.3 404 52.5
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 9.6e-102 374.8 268 68.7
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.6e-101 374.0 258 78.3
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 2.6e-99 366.7 536 39.4
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.4e-79 301.2 188 79.8
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 7.2e-73 278.9 269 59.9
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 3.7e-61 240.0 255 56.9
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 4.8e-61 239.6 255 56.9
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.1e-57 228.4 256 55.5
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 3.2e-49 200.3 145 73.1
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 5.4e-44 183.0 148 66.2
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 4.3e-41 173.3 164 60.4
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.7e-40 169.9 119 75.6
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 8.3e-37 159.1 125 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.9e-29 134.0 377 29.2
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 1.1e-23 115.5 60 91.7
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 6.6e-18 96.3 59 78.0
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 7.3e-17 92.8 56 82.1
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 4.7e-16 90.1 73 67.1
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 3.4e-06 57.4 65 53.8


User provided reference genes

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