Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 4.8e-208 727.6 378 100.0
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 3.7e-176 621.7 373 82.8
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.6e-163 579.7 405 73.3
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 5.4e-143 511.5 401 64.1
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 2.1e-139 499.6 366 66.1
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.0e-138 495.4 370 69.2
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.5e-137 493.4 376 68.1
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.9e-136 489.2 359 66.0
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 2.1e-134 483.0 363 63.1
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 3.5e-134 482.3 362 65.7
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 1.1e-132 477.2 366 65.0
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 4.0e-130 468.8 374 59.4
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 4.4e-129 465.3 364 62.4
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 5.8e-129 464.9 364 62.1
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 5.8e-129 464.9 376 60.4
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 6.4e-128 461.5 310 74.8
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 1.4e-127 460.3 359 62.7
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 3.0e-125 452.6 368 65.2
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 3.9e-125 452.2 376 59.0
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 6.2e-123 444.9 377 59.2
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 2.9e-120 436.0 362 59.4
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 1.0e-117 427.6 353 61.5
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.3e-117 427.2 367 57.5
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 2.3e-117 426.4 367 57.5
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 4.8e-115 418.7 312 66.7
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 8.1e-115 417.9 352 57.4
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 2.4e-114 416.4 349 56.7
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.0e-113 413.3 366 53.8
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 9.9e-113 411.0 351 56.1
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 6.4e-112 408.3 351 57.3
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 4.2e-111 405.6 348 54.3
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 5.5e-111 405.2 360 52.8
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 7.1e-111 404.8 349 56.7
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 9.3e-111 404.4 340 55.3
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.2e-110 404.1 360 55.8
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.6e-110 403.7 348 53.7
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 2.1e-110 403.3 377 54.6
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.7e-110 402.9 348 54.0
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 2.7e-110 402.9 363 56.2
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.3e-109 399.8 351 57.0
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.5e-108 396.4 348 52.9
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.3e-107 394.0 356 57.9
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 2.8e-107 392.9 377 50.4
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 6.9e-106 388.3 371 52.8
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 1.2e-105 387.5 360 52.2
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.0e-104 384.4 343 52.5
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.7e-104 383.6 351 54.4
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.7e-104 383.6 378 51.6
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.2e-104 383.3 336 54.5
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 2.2e-104 383.3 362 49.7
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 8.4e-104 381.3 373 49.3
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.1e-103 380.9 392 49.7
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.4e-103 380.6 346 48.8
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 4.2e-103 379.0 356 50.8
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 4.2e-103 379.0 360 52.5
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 5.5e-103 378.6 305 56.1
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.6e-102 377.1 339 52.8
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 3.5e-102 375.9 342 51.2
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.3e-101 374.0 351 49.9
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.3e-101 374.0 349 53.9
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.8e-101 373.6 364 50.5
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 2.3e-101 373.2 361 50.4
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 3.9e-101 372.5 310 55.8
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.1e-101 372.1 337 53.4
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 7.4e-100 368.2 306 55.2
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.3e-99 367.5 350 52.9
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.8e-99 366.3 376 46.8
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 3.7e-99 365.9 370 48.4
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 4.8e-99 365.5 361 52.6
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 6.3e-99 365.2 349 49.0
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 8.2e-99 364.8 351 50.4
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 3.1e-98 362.8 370 52.4
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.1e-98 362.5 363 53.4
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 5.3e-98 362.1 349 48.7
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.5e-97 360.5 363 52.6
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.0e-97 360.1 356 50.8
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 3.4e-97 359.4 329 52.3
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 1.7e-96 357.1 310 52.6
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 2.9e-96 356.3 358 49.4
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 6.5e-96 355.1 351 55.8
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.4e-95 354.0 366 49.7
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.9e-95 353.6 342 53.2
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.9e-95 353.6 342 53.5
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 2.5e-95 353.2 373 48.5
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 3.2e-95 352.8 351 52.7
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 3.2e-95 352.8 363 53.2
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 6.1e-94 348.6 360 50.6
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.3e-93 347.4 373 49.3
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 5.1e-93 345.5 356 46.6
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 5.1e-93 345.5 339 50.1
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 6.7e-93 345.1 357 47.9
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 8.7e-93 344.7 353 52.1
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 8.7e-93 344.7 351 47.9
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 1.5e-92 344.0 324 50.0
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 1.9e-92 343.6 343 50.1
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 3.3e-92 342.8 336 47.3
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 9.7e-92 341.3 359 49.6
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 2.2e-91 340.1 363 47.4
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 6.3e-91 338.6 354 47.2
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 8.2e-91 338.2 366 50.3
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.8e-90 337.0 374 46.0
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.2e-89 334.3 346 48.0
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 2.0e-89 333.6 342 48.8
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 2.6e-89 333.2 342 48.8
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.0e-88 331.3 366 46.2
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 5.0e-88 328.9 357 45.9
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.4e-87 327.4 378 46.6
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 2.5e-87 326.6 357 45.7
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 5.5e-87 325.5 248 59.3
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 1.2e-86 324.3 366 45.6
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 1.8e-85 320.5 361 49.6
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 2.3e-85 320.1 366 47.5
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 2.3e-85 320.1 376 48.9
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.0e-85 319.7 402 42.3
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.5e-84 317.4 384 46.4
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 1.7e-83 313.9 267 54.3
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.7e-83 313.9 368 46.2
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.7e-83 313.9 368 46.5
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 2.8e-83 313.2 348 48.9
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 6.3e-83 312.0 376 46.5
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.4e-82 310.8 369 46.3
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.8e-82 310.5 368 46.2
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 9.1e-82 308.1 371 46.4
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 4.5e-81 305.8 363 46.6
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.9e-80 303.1 295 55.3
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 3.8e-80 302.8 372 46.2
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.9e-79 300.4 355 46.2
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.5e-79 300.1 355 45.9
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.2e-78 297.7 340 45.3
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 2.1e-78 297.0 304 47.4
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.0e-77 294.7 368 45.4
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.0e-77 294.7 368 45.4
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 1.0e-77 294.7 283 48.1
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 9.7e-76 288.1 353 43.9
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 3.1e-74 283.1 325 45.5
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 1.3e-72 277.7 284 47.5
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 2.2e-72 276.9 365 41.9
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 2.7e-70 270.0 323 44.9
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.6e-70 269.6 333 43.5
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.8e-69 267.3 343 44.9
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.3e-67 261.2 339 45.1
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.3e-67 258.8 339 45.1
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.4e-66 256.9 339 44.0
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.5e-63 246.9 295 49.2
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 8.8e-61 238.4 340 41.2
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 1.3e-59 234.6 337 36.2
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.8e-59 233.4 327 35.8
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.1e-58 229.9 326 37.7
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 9.5e-55 218.4 290 38.6
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 4.4e-52 209.5 314 36.6
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.7e-51 207.6 265 43.4
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.7e-51 207.6 265 43.4
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.7e-51 206.5 202 45.0
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 5.9e-49 199.1 326 33.7
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 6.6e-48 195.7 348 32.2
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.4e-45 188.0 271 35.4
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.4e-45 188.0 171 54.4
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.0e-45 186.8 225 44.0
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 7.8e-41 172.2 294 31.6
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 2.3e-40 170.6 137 56.9
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.3e-39 165.6 190 41.6
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.1e-34 149.8 119 57.1
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 5.0e-32 142.9 115 57.4
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.2e-29 132.9 142 43.0
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.2e-27 127.5 257 37.0
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 1.4e-26 124.8 144 45.8
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.2e-25 121.7 249 32.5
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.6e-25 121.3 164 44.5
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 2.9e-19 100.5 84 51.2
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 1.5e-15 88.2 84 48.8
PRCOL_00002048 Prasinoderma coloniale HOM05D000861 ORTHO05D004749 4.7e-14 83.2 173 35.8
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.7e-14 83.2 82 42.7
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.1e-14 82.4 65 55.4
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 1.3e-11 75.1 61 54.1
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.0e-08 63.9 100 36.0


User provided reference genes

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