Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 6.0e-172 607.4 315 100.0
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 8.7e-163 577.0 316 94.3
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 6.9e-160 567.4 315 92.1
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 1.5e-159 566.2 315 92.1
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 2.2e-150 535.8 315 86.7
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 5.0e-150 534.6 313 85.3
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.0e-147 526.9 315 83.5
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 3.0e-147 525.4 315 82.5
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 7.7e-143 510.8 315 81.0
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 2.2e-137 492.7 314 76.8
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 7.0e-136 487.6 313 77.3
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 4.2e-133 478.4 315 75.6
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 1.6e-132 476.5 314 75.8
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 1.6e-132 476.5 314 76.4
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 2.7e-132 475.7 314 75.8
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 3.6e-132 475.3 313 78.3
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 3.6e-132 475.3 314 76.4
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 8.0e-132 474.2 314 75.8
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 8.0e-132 474.2 314 74.8
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.4e-131 473.4 314 75.8
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 2.3e-131 472.6 314 75.2
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.3e-131 472.6 314 74.8
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 3.0e-131 472.2 314 76.1
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 5.2e-131 471.5 311 75.6
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 8.8e-131 470.7 312 75.6
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 1.2e-130 470.3 312 75.6
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 1.5e-130 469.9 315 74.9
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 1.5e-130 469.9 312 75.3
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 2.0e-130 469.5 314 76.1
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 3.3e-130 468.8 314 74.8
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 4.4e-130 468.4 314 75.8
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 7.5e-130 467.6 314 74.2
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 7.5e-130 467.6 312 75.3
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 9.7e-130 467.2 313 74.1
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 9.7e-130 467.2 313 74.8
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 9.7e-130 467.2 290 78.3
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 1.3e-129 466.8 314 74.5
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 1.3e-129 466.8 312 74.7
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 1.3e-129 466.8 314 75.5
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 1.3e-129 466.8 312 74.4
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 2.2e-129 466.1 313 74.8
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 2.8e-129 465.7 314 74.5
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 2.8e-129 465.7 312 74.7
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 3.7e-129 465.3 314 75.2
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 4.8e-129 464.9 312 74.7
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 1.4e-128 463.4 312 75.0
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 9.1e-128 460.7 341 69.8
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 2.7e-127 459.1 311 74.9
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 5.9e-127 458.0 314 72.9
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 5.9e-127 458.0 299 74.6
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 7.7e-127 457.6 312 73.1
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 1.0e-126 457.2 311 72.3
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 1.0e-126 457.2 311 74.0
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 1.0e-126 457.2 312 73.4
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 1.7e-126 456.4 315 72.7
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.7e-126 456.4 312 73.4
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 3.8e-126 455.3 293 75.8
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 1.1e-125 453.8 313 71.9
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 1.5e-125 453.4 312 71.2
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 3.2e-125 452.2 315 73.0
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 3.2e-125 452.2 314 71.7
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 3.2e-125 452.2 311 74.3
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.6e-124 449.9 314 71.7
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 2.1e-124 449.5 313 71.2
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 2.1e-124 449.5 313 71.2
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 2.1e-124 449.5 313 71.6
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 2.7e-124 449.1 313 71.2
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 3.6e-124 448.7 313 71.6
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 3.6e-124 448.7 314 70.4
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 4.7e-124 448.4 312 70.8
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 6.1e-124 448.0 313 70.9
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 8.0e-124 447.6 303 73.9
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 8.0e-124 447.6 317 69.7
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 8.0e-124 447.6 293 74.4
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 1.4e-123 446.8 313 70.6
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 1.4e-123 446.8 313 70.6
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 1.8e-123 446.4 342 68.1
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 2.3e-123 446.0 313 71.6
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 8.8e-123 444.1 312 69.9
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 8.8e-123 444.1 318 70.4
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 2.0e-122 443.0 299 72.6
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 2.0e-122 443.0 313 70.0
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 2.0e-122 443.0 326 70.2
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 2.6e-122 442.6 314 68.5
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 3.4e-122 442.2 299 72.2
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 3.4e-122 442.2 299 72.2
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 3.4e-122 442.2 327 69.7
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 3.4e-122 442.2 327 69.7
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 3.4e-122 442.2 327 69.7
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 4.4e-122 441.8 299 72.2
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 5.7e-122 441.4 313 70.3
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 2.8e-121 439.1 315 69.8
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 4.8e-121 438.3 299 70.9
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 4.8e-121 438.3 292 74.0
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 6.3e-121 438.0 327 68.8
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 1.6e-119 433.3 286 74.8
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.0e-119 433.0 337 67.7
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 4.5e-119 431.8 311 70.1
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 7.7e-119 431.0 313 70.0
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 7.7e-119 431.0 314 68.8
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 1.0e-118 430.6 304 70.4
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 1.3e-118 430.3 310 68.7
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 1.7e-118 429.9 311 70.1
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 6.5e-118 427.9 316 69.0
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 6.5e-118 427.9 301 70.8
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 5.5e-117 424.9 298 70.1
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 5.5e-117 424.9 299 70.6
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 1.6e-116 423.3 257 80.2
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 2.8e-116 422.5 311 69.5
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 3.6e-116 422.2 299 70.2
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 5.2e-115 418.3 269 75.8
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 8.8e-115 417.5 315 68.6
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.3e-113 413.7 314 67.5
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 3.5e-111 405.6 291 69.1
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.8e-107 393.3 253 76.3
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 9.8e-106 387.5 327 63.9
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 2.2e-105 386.3 314 63.4
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 2.9e-105 386.0 316 63.0
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.1e-104 384.0 235 83.0
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 2.2e-97 359.8 224 81.2
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 1.9e-93 346.7 315 59.4
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 8.9e-91 337.8 314 58.6
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 3.7e-89 332.4 308 54.5
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.9e-88 330.1 226 73.9
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 9.5e-85 317.8 314 52.9
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 1.1e-83 314.3 299 55.2
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 9.9e-82 307.8 276 59.8
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 7.8e-79 298.1 307 50.8
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 7.8e-79 298.1 314 50.3
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 7.1e-72 275.0 280 53.2
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 3.9e-70 269.2 301 48.5
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 9.9e-66 254.6 294 47.6
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 1.3e-60 237.7 230 57.0
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 5.7e-45 185.7 297 38.4
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 7.4e-45 185.3 185 57.8
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 7.6e-42 175.3 111 78.4
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 1.1e-37 161.4 93 88.2
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 2.1e-31 140.6 94 71.3
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 2.6e-26 123.6 90 68.9
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 1.6e-23 114.4 79 69.6
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 9.7e-21 105.1 115 53.9
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 1.7e-20 104.4 90 62.2
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 1.7e-20 104.4 90 62.2
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 2.3e-14 84.0 90 52.2
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 1.9e-08 64.3 100 45.0


User provided reference genes

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