Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G193600 Phaseolus vulgaris HOM05D000032 ORTHO05D030846 5.3e-54 214.2 112 100.0
Phvul.007G179201 Phaseolus vulgaris HOM05D000032 ORTHO05D007443 3.5e-21 105.1 57 98.2
Phvul.007G193500 Phaseolus vulgaris HOM05D000032 ORTHO05D007443 2.9e-20 102.1 57 96.5
VMungo0720G2333 Vigna mungo HOM05D000032 ORTHO05D007443 1.7e-15 86.3 57 80.7
TPR.G6058 Trifolium pratense HOM05D000032 ORTHO05D007443 2.1e-10 69.3 55 67.3
Glyma.10G152900 Glycine max HOM05D000032 ORTHO05D007443 1.0e-09 67.0 60 71.7
Migut.H00321 Erythranthe guttata HOM05D000032 ORTHO05D007443 2.3e-09 65.9 46 73.9
arahy.Tifrunner.gnm1.ann1.MR2VJ3 Arachis hypogaea HOM05D000032 ORTHO05D007443 5.2e-09 64.7 55 67.3
arahy.Tifrunner.gnm1.ann1.11GZ1T Arachis hypogaea HOM05D000032 ORTHO05D007443 6.8e-09 64.3 52 69.2
CiPaw.08G171700 Carya illinoinensis HOM05D000032 ORTHO05D007443 8.8e-09 63.9 53 66.0
Sed0018251 Sechium edule HOM05D000032 ORTHO05D007443 8.8e-09 63.9 53 67.9
arahy.Tifrunner.gnm1.ann1.318AHN Arachis hypogaea HOM05D000032 ORTHO05D007443 1.2e-08 63.5 55 67.3
Lj5g0020960 Lotus japonicus HOM05D000032 ORTHO05D007443 1.2e-08 63.5 55 65.5
Nitab4.5_0001225g0240 Nicotiana tabacum HOM05D000032 ORTHO05D007443 1.2e-08 63.5 46 73.9
Nitab4.5_0010329g0010 Nicotiana tabacum HOM05D000032 ORTHO05D007443 1.2e-08 63.5 46 73.9
CiPaw.08G149900 Carya illinoinensis HOM05D000032 ORTHO05D007443 2.0e-08 62.8 50 66.0
unitig_899.g14589 Utricularia gibba HOM05D000032 ORTHO05D007443 2.0e-08 62.8 51 62.7
Actinidia11960 Actinidia chinensis HOM05D006441 ORTHO05D030846 2.6e-08 62.4 51 62.7
CSS0045534 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007443 2.6e-08 62.4 59 55.9
Lalb_Chr09g0323751 Lupinus albus HOM05D000032 ORTHO05D007443 2.6e-08 62.4 60 65.0
MD02G1190200 Malus domestica HOM05D000032 ORTHO05D007443 2.6e-08 62.4 57 64.9
RcHm_v2.0_Chr7g0222281 Rosa chinensis HOM05D000032 ORTHO05D007443 2.6e-08 62.4 57 64.9
SGA_v2.0_scaffold121G33068 Striga asiatica HOM05D000032 ORTHO05D007443 3.4e-08 62.0 56 64.3
MSTRG.23651 Avicennia marina HOM05D000032 ORTHO05D007443 5.7e-08 61.2 44 68.2
Cfa006775 Carpinus fangiana HOM05D000032 ORTHO05D007443 5.7e-08 61.2 59 66.1
Ca_10121_v3 Cicer arietinum L. HOM05D000032 ORTHO05D007443 5.7e-08 61.2 55 67.3
ClCG01G017830 Citrullus lanatus HOM05D000032 ORTHO05D007443 5.7e-08 61.2 54 66.7
CANSAT64G0745 Cannabis sativa HOM05D000032 ORTHO05D007443 7.5e-08 60.8 59 62.7
Medtr1g083130 Medicago truncatula HOM05D000032 ORTHO05D007443 7.5e-08 60.8 50 68.0
MBI16_g35719_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007443 9.8e-08 60.5 43 72.1
CsaV3_6G044370 Cucumis sativus L. HOM05D000032 ORTHO05D007443 1.3e-07 60.1 46 71.7
Eucgr.H02337 Eucalyptus grandis HOM05D000032 ORTHO05D007443 1.3e-07 60.1 41 75.6
PGSC0003DMG400021177 Solanum tuberosum HOM05D000032 ORTHO05D007443 1.3e-07 60.1 43 72.1
Sp7g32660 Schrenkiella parvula HOM05D000032 ORTHO05D007443 1.7e-07 59.7 57 61.4
Aqoxy3G01532 Aquilegia oxysepala HOM05D000032 ORTHO05D007443 2.2e-07 59.3 46 67.4
Sopen02g019260 Solanum pennellii HOM05D000032 ORTHO05D007443 2.2e-07 59.3 43 72.1
DCAR_004695 Daucus carota HOM05D000032 ORTHO05D007443 2.8e-07 58.9 54 63.0
FAN18G2124 Fragaria x ananassa HOM05D000032 ORTHO05D007443 2.8e-07 58.9 57 57.9
Lj4C166T2 Lonicera japonica HOM05D000032 ORTHO05D007443 2.8e-07 58.9 59 57.6
Prupe.6G216200 Prunus persica HOM05D000032 ORTHO05D007443 2.8e-07 58.9 57 59.6
Atru.chr3.1066 Acer truncatum HOM05D000032 ORTHO05D007443 3.7e-07 58.5 46 63.0
Ah.02g125290 Amaranthus hybridus HOM05D000032 ORTHO05D007443 3.7e-07 58.5 57 59.6
AUR62004035 Chenopodium quinoa HOM05D000032 ORTHO05D007443 3.7e-07 58.5 46 69.6
AUR62007544 Chenopodium quinoa HOM05D000032 ORTHO05D007443 3.7e-07 58.5 46 69.6
Haze_03984 Corylus avellana HOM05D000032 ORTHO05D007443 3.7e-07 58.5 36 83.3
MELO3C007659.2 Cucumis melo HOM05D000032 ORTHO05D007443 3.7e-07 58.5 54 63.0
C01p03900 Brassica napus HOM05D000032 ORTHO05D007443 4.8e-07 58.2 37 75.7
BolC1t00383H Brassica oleracea HOM05D000032 ORTHO05D007443 4.8e-07 58.2 37 75.7
Nn5g30290 Nelumbo nucifera HOM05D000032 ORTHO05D007443 4.8e-07 58.2 46 67.4
QL06p038783 Quercus lobata HOM05D000032 ORTHO05D007443 4.8e-07 58.2 36 80.6
Solyc02g070100.3 Solanum lycopersicum HOM05D000032 ORTHO05D007443 4.8e-07 58.2 43 72.1
BcaNung00645 Brassica carinata HOM05D000032 ORTHO05D007443 6.3e-07 57.8 38 73.7
GSVIVG01002619001 Vitis vinifera HOM05D000032 ORTHO05D007443 6.3e-07 57.8 44 63.6
EL10Ac6g15590 Beta vulgaris HOM05D000032 ORTHO05D007443 8.3e-07 57.4 48 64.6
CARHR243180 Cardamine hirsuta HOM05D000032 ORTHO05D007443 8.3e-07 57.4 45 66.7
vmacro04601 Vaccinium macrocarpon HOM05D000032 ORTHO05D007443 8.3e-07 57.4 37 78.4
CAN.G79.11 Capsicum annuum HOM05D000032 ORTHO05D007443 1.1e-06 57.0 43 69.8
Psat6g149960 Pisum sativum HOM05D000032 ORTHO05D007443 1.1e-06 57.0 44 68.2
ATR0739G078 Amborella trichopoda HOM05D000032 ORTHO05D007443 1.4e-06 56.6 44 68.2
Dinv23050 Davidia involucrata HOM05D000032 ORTHO05D007443 1.4e-06 56.6 45 60.0
FAN04G2244 Fragaria x ananassa HOM05D000032 ORTHO05D007443 1.4e-06 56.6 57 56.1
Lsat_1_v5_gn_4_158421 Lactuca sativa HOM05D000032 ORTHO05D007443 1.4e-06 56.6 46 63.0
Hund16419 Selenicereus undatus HOM05D000032 ORTHO05D007443 1.4e-06 56.6 37 75.7
TWI74G1593 Tripterygium wilfordii HOM05D000032 ORTHO05D007443 1.4e-06 56.6 36 77.8
TAR381G0672 Trochodendron aralioides HOM05D000032 ORTHO05D007443 1.4e-06 56.6 36 75.0
TAR381G1241 Trochodendron aralioides HOM05D000032 ORTHO05D007443 1.4e-06 56.6 36 75.0
FAN08G0861 Fragaria x ananassa HOM05D000032 ORTHO05D007443 1.8e-06 56.2 57 56.1
Rhsim10G0094500 Rhododendron simsii HOM05D000032 ORTHO05D007443 1.8e-06 56.2 37 75.7
BcaB03g11802 Brassica carinata HOM05D000032 ORTHO05D007443 2.4e-06 55.8 47 63.8
A01p03610 Brassica napus HOM05D000032 ORTHO05D007443 2.4e-06 55.8 36 75.0
BraA01t00347Z Brassica rapa HOM05D000032 ORTHO05D007443 2.4e-06 55.8 36 75.0
Pp3c27_1430 Physcomitrium patens HOM05D000032 ORTHO05D007443 2.4e-06 55.8 40 67.5
Peaxi162Scf00423g00221 Petunia axillaris HOM05D000032 ORTHO05D007443 3.1e-06 55.5 49 65.3
Actinidia36419 Actinidia chinensis HOM05D000032 ORTHO05D007443 4.1e-06 55.1 50 58.0
BcaC01g00863 Brassica carinata HOM05D000032 ORTHO05D007443 4.1e-06 55.1 37 73.0
C03p85330 Brassica napus HOM05D000032 ORTHO05D007443 4.1e-06 55.1 37 73.0
BolC3t20823H Brassica oleracea HOM05D000032 ORTHO05D007443 4.1e-06 55.1 37 73.0
CDE01G0309 Ceratophyllum demersum HOM05D000032 ORTHO05D007443 4.1e-06 55.1 43 62.8
Thhalv10024759m.g Eutrema salsugineum HOM05D000032 ORTHO05D007443 4.1e-06 55.1 40 70.0
FAN13G1203 Fragaria x ananassa HOM05D000032 ORTHO05D007443 4.1e-06 55.1 57 56.1
Gorai.007G226800 Gossypium raimondii HOM05D000032 ORTHO05D007443 4.1e-06 55.1 37 73.0
PGR102G1941 Punica granatum HOM05D000032 ORTHO05D007443 4.1e-06 55.1 54 57.4
SHI12019 Sapria himalayana HOM05D000032 ORTHO05D007443 4.1e-06 55.1 57 59.6
Thhalv10013368m.g Eutrema salsugineum HOM05D000032 ORTHO05D007443 5.4e-06 54.7 57 56.1
Aa31LG2G15620 Aethionema arabicum HOM05D000032 ORTHO05D007443 7.0e-06 54.3 37 67.6
Cpa.g.sc125.34 Carica papaya HOM05D000032 ORTHO05D007443 7.0e-06 54.3 36 75.0
Sed0005463 Sechium edule HOM05D000032 ORTHO05D007443 7.0e-06 54.3 54 59.3
THA.LOC104807641 Tarenaya hassleriana HOM05D000032 ORTHO05D007443 7.0e-06 54.3 35 74.3
Thecc.01G077000 Theobroma cacao HOM05D000032 ORTHO05D007443 7.0e-06 54.3 37 70.3
Cc07_g07410 Coffea canephora HOM05D000032 ORTHO05D007443 9.1e-06 53.9 36 75.0
Duzib147G1507 Durio zibethinus HOM05D000032 ORTHO05D007443 9.1e-06 53.9 36 75.0
Potri.007G021800 Populus trichocarpa HOM05D000032 ORTHO05D007443 9.1e-06 53.9 61 57.4
Sabra07G0018900 Salix brachista HOM05D000032 ORTHO05D007443 9.1e-06 53.9 44 68.2


User provided reference genes

Program Settings