Gene: vmacro04601

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro04601
  • Transcript Identifier vmacro04601-RA
  • Gene Type Coding gene
  • Location chr12_Vaccinium_macrocarpon_Stevens_v1 : 4507125-4514876 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro04601_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to RH16: DEAD-box ATP-dependent RNA helicase 16 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc02g070100.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc02g070100.3
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G34910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated