Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G184400 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 3.7e-221 771.5 465 100.0
VMungo0720G0333 Vigna mungo HOM05D000792 ORTHO05D004195 2.4e-156 556.2 467 77.9
Glyma.03G244500 Glycine max HOM05D000792 ORTHO05D004195 2.6e-150 536.2 468 75.4
arahy.Tifrunner.gnm1.ann1.JA3EPN Arachis hypogaea HOM05D000792 ORTHO05D004195 3.4e-150 535.8 468 73.7
arahy.Tifrunner.gnm1.ann1.GRVM6J Arachis hypogaea HOM05D000792 ORTHO05D004195 7.6e-150 534.6 468 73.7
Glyma.19G241800 Glycine max HOM05D000792 ORTHO05D004195 1.7e-149 533.5 470 74.7
Glyma.19G241300 Glycine max HOM05D000792 ORTHO05D004195 3.7e-149 532.3 468 74.8
QL03p000120 Quercus lobata HOM05D000792 ORTHO05D004195 4.9e-149 531.9 468 73.7
Phvul.006G098200 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 8.4e-149 531.2 468 74.4
Glyma.03G243800 Glycine max HOM05D000792 ORTHO05D004195 1.1e-148 530.8 468 74.1
Lj5g0000884 Lotus japonicus HOM05D000792 ORTHO05D004195 2.4e-148 529.6 469 74.8
VMungo0540G1958 Vigna mungo HOM05D000792 ORTHO05D004195 4.1e-148 528.9 468 74.4
Phvul.006G097800 Phaseolus vulgaris HOM05D000792 ORTHO05D004195 7.1e-148 528.1 468 74.1
VMungo0540G0969 Vigna mungo HOM05D000792 ORTHO05D004195 2.1e-147 526.6 466 74.2
Lalb_Chr18g0045241 Lupinus albus HOM05D000792 ORTHO05D004195 3.0e-146 522.7 465 73.1
Lalb_Chr15g0076961 Lupinus albus HOM05D000792 ORTHO05D004195 1.5e-145 520.4 467 74.5
Lj1g0010529 Lotus japonicus HOM05D000792 ORTHO05D004195 7.3e-145 518.1 468 73.7
Manes.08G126500 Manihot esculenta HOM05D000792 ORTHO05D004195 7.3e-145 518.1 470 72.3
ClCG02G016330 Citrullus lanatus HOM05D000792 ORTHO05D004195 2.8e-144 516.2 467 71.1
arahy.Tifrunner.gnm1.ann1.GH6CGE Arachis hypogaea HOM05D000792 ORTHO05D004195 6.2e-144 515.0 470 73.4
Ca_10069_v3 Cicer arietinum L. HOM05D000792 ORTHO05D004195 6.2e-144 515.0 470 73.2
Psat3g008760 Pisum sativum HOM05D000792 ORTHO05D004195 6.2e-144 515.0 465 73.5
Ca_09396_v3 Cicer arietinum L. HOM05D000792 ORTHO05D004195 1.8e-143 513.5 472 73.1
Cpa.g.sc117.38 Carica papaya HOM05D000792 ORTHO05D004195 5.2e-143 511.9 469 71.4
Haze_04306 Corylus avellana HOM05D000792 ORTHO05D004195 5.2e-143 511.9 478 70.7
Psat0s4348g0040 Pisum sativum HOM05D000792 ORTHO05D004195 5.2e-143 511.9 470 73.0
Manes.09G158100 Manihot esculenta HOM05D000792 ORTHO05D004195 6.8e-143 511.5 468 71.2
Sed0009127 Sechium edule HOM05D000792 ORTHO05D004195 2.6e-142 509.6 467 71.1
TPR.G7014 Trifolium pratense HOM05D000792 ORTHO05D004195 2.6e-142 509.6 468 73.1
CiPaw.07G009200 Carya illinoinensis HOM05D000792 ORTHO05D004195 4.4e-142 508.8 468 71.6
Potri.013G033800 Populus trichocarpa HOM05D000792 ORTHO05D004195 5.8e-142 508.4 470 70.9
Thecc.05G291700 Theobroma cacao HOM05D000792 ORTHO05D004195 5.8e-142 508.4 470 71.3
FAN05G0287 Fragaria x ananassa HOM05D000792 ORTHO05D004195 9.9e-142 507.7 468 56.6
FAN02G1626 Fragaria x ananassa HOM05D000792 ORTHO05D004195 1.3e-141 507.3 468 66.9
Ciclev10000367m.g Citrus clementina HOM05D000792 ORTHO05D004195 2.2e-141 506.5 470 71.1
Gorai.013G122600 Gossypium raimondii HOM05D000792 ORTHO05D004195 3.8e-141 505.8 468 70.5
RcHm_v2.0_Chr3g0452571 Rosa chinensis HOM05D000792 ORTHO05D004195 8.4e-141 504.6 468 70.9
CiPaw.08G177700 Carya illinoinensis HOM05D000792 ORTHO05D004195 1.1e-140 504.2 468 71.4
Glyma.10G159000 Glycine max HOM05D000792 ORTHO05D004195 1.1e-140 504.2 466 74.0
Gohir.D13G176800 Gossypium hirsutum HOM05D000792 ORTHO05D004195 1.1e-140 504.2 470 70.2
Medtr7g114370 Medicago truncatula HOM05D000792 ORTHO05D004195 1.4e-140 503.8 470 72.6
CsaV3_2G004410 Cucumis sativus L. HOM05D000792 ORTHO05D004195 1.9e-140 503.4 467 70.4
FvH4_6g03981 Fragaria vesca HOM05D000792 ORTHO05D004195 1.9e-140 503.4 468 70.7
FAN09G2107 Fragaria x ananassa HOM05D000792 ORTHO05D004195 1.9e-140 503.4 468 67.1
Prupe.6G336900 Prunus persica HOM05D000792 ORTHO05D004195 3.2e-140 502.7 468 70.3
GSVIVG01021896001 Vitis vinifera HOM05D000792 ORTHO05D004195 3.2e-140 502.7 470 70.4
TAR636G2564 Trochodendron aralioides HOM05D000792 ORTHO05D004195 4.2e-140 502.3 471 69.6
MELO3C004353.2 Cucumis melo HOM05D000792 ORTHO05D004195 5.4e-140 501.9 467 70.2
Gohir.A13G171400 Gossypium hirsutum HOM05D000792 ORTHO05D004195 5.4e-140 501.9 470 70.2
Medtr1g081830 Medicago truncatula HOM05D000792 ORTHO05D004195 5.4e-140 501.9 470 72.1
Gorai.013G202200 Gossypium raimondii HOM05D000792 ORTHO05D004195 7.1e-140 501.5 470 70.0
Sabra13G0033000 Salix brachista HOM05D000792 ORTHO05D004195 9.3e-140 501.1 470 55.5
CSS0043695 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 1.6e-139 500.4 469 70.1
Gohir.D13G109000 Gossypium hirsutum HOM05D000792 ORTHO05D004195 1.6e-139 500.4 468 69.9
TWI36G0731 Tripterygium wilfordii HOM05D000792 ORTHO05D004195 4.6e-139 498.8 470 70.2
Duzib128G1364 Durio zibethinus HOM05D000792 ORTHO05D004195 6.0e-139 498.4 468 69.4
MD12G1233700 Malus domestica HOM05D000792 ORTHO05D004195 7.8e-139 498.0 466 71.2
CSS0027954 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 1.0e-138 497.7 469 69.7
Potri.005G046500 Populus trichocarpa HOM05D000792 ORTHO05D004195 1.3e-138 497.3 470 70.4
Duzib177G0519 Durio zibethinus HOM05D000792 ORTHO05D004195 3.0e-138 496.1 470 69.4
Hund22093 Selenicereus undatus HOM05D000792 ORTHO05D004195 3.0e-138 496.1 470 69.6
Atru.chr2.653 Acer truncatum HOM05D000792 ORTHO05D004195 3.9e-138 495.7 470 69.6
Dinv03363 Davidia involucrata HOM05D000792 ORTHO05D004195 6.6e-138 495.0 469 70.1
FAN05G4969 Fragaria x ananassa HOM05D000792 ORTHO05D004195 6.6e-138 495.0 468 70.3
MD04G1217000 Malus domestica HOM05D000792 ORTHO05D004195 1.1e-137 494.2 466 70.8
Sed0026552 Sechium edule HOM05D000792 ORTHO05D004195 2.5e-137 493.0 467 69.8
Actinidia05754 Actinidia chinensis HOM05D000792 ORTHO05D004195 1.3e-136 490.7 469 69.9
Duzib106G0823 Durio zibethinus HOM05D000792 ORTHO05D004195 1.6e-136 490.3 470 69.4
TAR365G0075 Trochodendron aralioides HOM05D000792 ORTHO05D004195 1.6e-136 490.3 469 69.3
Cc02_g31260 Coffea canephora HOM05D000792 ORTHO05D004195 2.1e-136 490.0 468 69.9
CSS0015984 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 2.8e-136 489.6 469 69.5
Eucgr.H04403 Eucalyptus grandis HOM05D000792 ORTHO05D004195 3.6e-136 489.2 470 69.4
Rhsim05G0148700 Rhododendron simsii HOM05D000792 ORTHO05D004195 8.1e-136 488.0 468 68.8
HanXRQChr16g0498011 Helianthus annuus HOM05D000792 ORTHO05D004195 1.1e-135 487.6 466 68.9
EL10Ac4g09219 Beta vulgaris HOM05D000792 ORTHO05D004195 1.4e-135 487.3 469 69.3
Nitab4.5_0000245g0030 Nicotiana tabacum HOM05D000792 ORTHO05D004195 1.4e-135 487.3 469 61.4
Sc09g0003670 Simmondsia chinensis HOM05D000792 ORTHO05D004195 1.4e-135 487.3 469 68.9
Nitab4.5_0006443g0030 Nicotiana tabacum HOM05D000792 ORTHO05D004195 1.8e-135 486.9 469 68.9
CSS0038276 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 2.4e-135 486.5 469 69.3
Gohir.D11G267100 Gossypium hirsutum HOM05D000792 ORTHO05D004195 2.4e-135 486.5 470 68.3
Ah.06g192810 Amaranthus hybridus HOM05D000792 ORTHO05D004195 4.0e-135 485.7 469 69.3
Peaxi162Scf00225g00310 Petunia axillaris HOM05D000792 ORTHO05D004195 5.3e-135 485.3 469 68.9
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 9.0e-135 484.6 469 58.2
TWI12G0870 Tripterygium wilfordii HOM05D000792 ORTHO05D004195 9.0e-135 484.6 469 69.3
Gorai.007G286900 Gossypium raimondii HOM05D000792 ORTHO05D004195 2.0e-134 483.4 470 68.1
Sabra05G0042400 Salix brachista HOM05D000792 ORTHO05D004195 2.6e-134 483.0 470 69.4
Solyc01g098090.3 Solanum lycopersicum HOM05D000792 ORTHO05D004195 4.4e-134 482.3 469 69.1
Gohir.A13G106300 Gossypium hirsutum HOM05D000792 ORTHO05D004195 5.8e-134 481.9 468 68.6
Sopen01g041660 Solanum pennellii HOM05D000792 ORTHO05D004195 3.8e-133 479.2 469 68.9
Gohir.A11G257200 Gossypium hirsutum HOM05D000792 ORTHO05D004195 4.9e-133 478.8 470 67.7
Dinv17744 Davidia involucrata HOM05D000792 ORTHO05D004195 3.2e-132 476.1 471 54.4
Lj9A672G81 Lonicera japonica HOM05D000792 ORTHO05D004195 4.2e-132 475.7 455 70.5
MSTRG.3420 Avicennia marina HOM05D000792 ORTHO05D004195 2.3e-130 469.9 460 67.8
Lsat_1_v5_gn_0_840 Lactuca sativa HOM05D000792 ORTHO05D004195 2.3e-130 469.9 474 66.2
Lj7C479G6 Lonicera japonica HOM05D000792 ORTHO05D004195 2.3e-130 469.9 470 66.8
Peaxi162Scf00071g00939 Petunia axillaris HOM05D000792 ORTHO05D004195 2.3e-130 469.9 467 67.0
SGA_v2.0_scaffold15G07272 Striga asiatica HOM05D000792 ORTHO05D004195 2.3e-130 469.9 459 67.1
FAN14G0951 Fragaria x ananassa HOM05D000792 ORTHO05D004195 3.9e-130 469.2 468 54.3
PSO170G0948 Papaver somniferum HOM05D000792 ORTHO05D004195 5.1e-130 468.8 469 65.7
HanXRQChr14g0429451 Helianthus annuus HOM05D000792 ORTHO05D004195 3.3e-129 466.1 462 66.7
SalBow5G1543 Salvia bowleyana HOM05D000792 ORTHO05D004195 4.3e-129 465.7 485 57.7
Migut.K00761 Erythranthe guttata HOM05D000792 ORTHO05D004195 7.3e-129 464.9 460 67.6
MBI19_g08863_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D004195 2.1e-128 463.4 472 66.5
Gohir.D08G230900 Gossypium hirsutum HOM05D000792 ORTHO05D004195 3.6e-128 462.6 470 66.6
Gohir.A08G213900 Gossypium hirsutum HOM05D000792 ORTHO05D004195 4.8e-128 462.2 470 66.4
Gorai.004G245300 Gossypium raimondii HOM05D000792 ORTHO05D004195 4.8e-128 462.2 470 66.6
AUR62005021 Chenopodium quinoa HOM05D000792 ORTHO05D004195 1.1e-127 461.1 451 70.3
Lsat_1_v5_gn_8_29340 Lactuca sativa HOM05D000792 ORTHO05D004195 1.4e-127 460.7 473 65.8
ECA233G2068 Erigeron canadensis HOM05D000792 ORTHO05D004195 5.3e-127 458.8 467 67.2
CDE02G3582 Ceratophyllum demersum HOM05D000792 ORTHO05D004195 2.6e-126 456.4 472 65.7
Oeu003790.1 Olea europaea HOM05D000792 ORTHO05D004195 3.4e-126 456.1 467 66.4
Oeu004838.1 Olea europaea HOM05D000792 ORTHO05D004195 3.4e-126 456.1 459 66.7
HPP92_016897 Vanilla planifolia HOM05D000792 ORTHO05D004195 9.9e-126 454.5 469 61.8
ATR0772G088 Amborella trichopoda HOM05D000792 ORTHO05D004195 1.7e-125 453.8 469 64.4
MBI18_g25810_MAGBIO Magnolia biondii HOM05D000792 ORTHO05D004195 2.9e-125 453.0 493 50.3
THA.LOC104821692 Tarenaya hassleriana HOM05D000792 ORTHO05D004195 3.8e-125 452.6 467 64.2
Nitab4.5_0000087g0250 Nicotiana tabacum HOM05D000792 ORTHO05D004195 8.4e-125 451.4 491 49.3
Aqoxy2G03096 Aquilegia oxysepala HOM05D000792 ORTHO05D004195 1.9e-124 450.3 468 65.0
Sopen08g008890 Solanum pennellii HOM05D000792 ORTHO05D004195 2.1e-123 446.8 466 64.6
CDE09G0368 Ceratophyllum demersum HOM05D000792 ORTHO05D004195 1.3e-122 444.1 470 49.1
THA.LOC104818655 Tarenaya hassleriana HOM05D000792 ORTHO05D004195 8.1e-120 434.9 469 63.8
COL.COLO4_13633 Corchorus olitorius HOM05D000792 ORTHO05D004195 2.4e-119 433.3 493 56.4
Thhalv10020130m.g Eutrema salsugineum HOM05D000792 ORTHO05D004195 3.4e-118 429.5 467 62.1
BcaB04g19281 Brassica carinata HOM05D000792 ORTHO05D004195 5.8e-118 428.7 468 62.6
A05p42490 Brassica napus HOM05D000792 ORTHO05D004195 1.3e-117 427.6 467 62.5
BraA05t23003Z Brassica rapa HOM05D000792 ORTHO05D004195 1.3e-117 427.6 467 62.5
Nn3g21306 Nelumbo nucifera HOM05D000792 ORTHO05D004195 1.3e-117 427.6 471 64.1
AL3G15470 Arabidopsis lyrata HOM05D000792 ORTHO05D004195 1.7e-117 427.2 464 62.5
BcaC01g04335 Brassica carinata HOM05D000792 ORTHO05D004195 2.2e-117 426.8 465 62.4
C03p41360 Brassica napus HOM05D000792 ORTHO05D004195 2.2e-117 426.8 465 62.4
Carub.0003s0433 Capsella rubella HOM05D000792 ORTHO05D004195 6.5e-117 425.2 467 61.7
CARHR079410 Cardamine hirsuta HOM05D000792 ORTHO05D004195 6.5e-117 425.2 467 62.1
HanXRQChr12g0366721 Helianthus annuus HOM05D000792 ORTHO05D004195 1.1e-116 424.5 464 63.8
PGR004G0598 Punica granatum HOM05D000792 ORTHO05D004195 5.5e-116 422.2 469 63.3
A03p33980 Brassica napus HOM05D000792 ORTHO05D004195 1.2e-115 421.0 465 61.5
BraA03t12573Z Brassica rapa HOM05D000792 ORTHO05D004195 1.2e-115 421.0 465 61.5
Lsat_1_v5_gn_2_6701 Lactuca sativa HOM05D000792 ORTHO05D004195 1.2e-115 421.0 461 61.4
BolC3t16419H Brassica oleracea HOM05D000792 ORTHO05D004195 1.6e-115 420.6 465 61.5
SEGI_34645 Sequoiadendron giganteum HOM05D000792 ORTHO05D004195 1.6e-115 420.6 469 61.2
AT3G05090 Arabidopsis thaliana HOM05D000792 ORTHO05D004195 2.7e-115 419.9 464 61.4
BcaC05g29993 Brassica carinata HOM05D000792 ORTHO05D004195 5.7e-113 412.1 468 61.8
Aa31LG5G15360 Aethionema arabicum HOM05D000792 ORTHO05D004195 1.6e-112 410.6 531 42.6
Zm00001eb407650 Zea mays HOM05D000792 ORTHO05D004195 8.2e-112 408.3 465 63.0
Sp2g20380 Schrenkiella parvula HOM05D000792 ORTHO05D004195 2.4e-111 406.8 468 60.9
Os12g0165000 Oryza sativa ssp. japonica HOM05D000792 ORTHO05D004195 3.8e-109 399.4 465 61.1
SHI18278 Sapria himalayana HOM05D000792 ORTHO05D004195 4.6e-107 392.5 458 52.4
Zm00001eb139400 Zea mays HOM05D000792 ORTHO05D004195 2.5e-105 386.7 441 62.8
Pp3c2_9310 Physcomitrium patens HOM05D000792 ORTHO05D004195 1.1e-95 354.8 468 56.0
Pp3c14_23300 Physcomitrium patens HOM05D000792 ORTHO05D004195 3.4e-94 349.7 474 56.3
SMO367G0211 Selaginella moellendorffii HOM05D000792 ORTHO05D004195 5.0e-93 345.9 455 57.6
Sp3g03910 Schrenkiella parvula HOM05D000792 ORTHO05D004195 1.9e-92 344.0 382 64.9
C05p62150 Brassica napus HOM05D000792 ORTHO05D004195 7.4e-89 332.0 468 55.3
BolC5t34873H Brassica oleracea HOM05D000792 ORTHO05D004195 7.4e-89 332.0 468 55.3
Mapoly0016s0038 Marchantia polymorpha HOM05D000792 ORTHO05D004195 8.2e-88 328.6 467 53.7
Pp3c1_36050 Physcomitrium patens HOM05D000792 ORTHO05D004195 8.5e-85 318.5 465 39.8
AagrBONN_evm.TU.Sc2ySwM_369.430 Anthoceros agrestis HOM05D000792 ORTHO05D004195 1.9e-84 317.4 475 52.4
vmacro19669 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 6.5e-69 265.8 190 65.3
VMungo0251G2782 Vigna mungo HOM05D000792 ORTHO05D004195 8.9e-58 228.8 196 61.7
Solyc08g023580.4 Solanum lycopersicum HOM05D000792 ORTHO05D004195 1.5e-49 201.4 164 55.5
Hma1.2p1_0083F.1_g042650 Hydrangea macrophylla HOM05D000792 ORTHO05D004195 8.6e-45 185.7 234 75.6
CBR_g51918 Chara braunii HOM05D000792 ORTHO05D004195 3.1e-42 177.2 464 29.5
TAR362G0581 Trochodendron aralioides HOM05D000792 ORTHO05D004195 4.4e-41 173.3 234 53.8
PRCOL_00004864 Prasinoderma coloniale HOM05D000792 ORTHO05D004195 2.2e-40 171.0 429 41.3
Solyc08g023590.4 Solanum lycopersicum HOM05D000792 ORTHO05D004195 1.7e-37 161.4 232 72.4
vmacro19668 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 1.5e-36 158.3 123 61.8
Cre13.g583250 Chlamydomonas reinhardtii HOM05D000792 ORTHO05D004195 2.8e-35 154.1 440 39.8
Psat4g217640 Pisum sativum HOM05D000792 ORTHO05D004195 3.4e-25 120.6 139 48.2
Glyma.16G018700 Glycine max HOM05D000792 ORTHO05D004195 7.6e-25 119.4 86 73.3
vmacro19671 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 4.6e-22 110.2 86 65.1
QL12p019882 Quercus lobata HOM05D000792 ORTHO05D004195 6.6e-21 106.3 82 62.2
Sopen00g011420 Solanum pennellii HOM05D000792 ORTHO05D004195 1.3e-19 102.1 86 64.0
Oeu050775.1 Olea europaea HOM05D000792 ORTHO05D004195 1.8e-18 98.2 78 62.8
RcHm_v2.0_Chr2g0132041 Rosa chinensis HOM05D000792 ORTHO05D004195 2.4e-15 87.8 54 74.1
MCO06G155 Micromonas commoda HOM05D000792 ORTHO05D004195 2.7e-14 84.3 231 30.3
Lsat_1_v5_gn_9_94640 Lactuca sativa HOM05D000792 ORTHO05D004195 3.0e-13 80.9 134 39.6
RcHm_v2.0_Chr2g0132051 Rosa chinensis HOM05D000792 ORTHO05D004195 3.0e-13 80.9 69 62.3
Lsat_1_v5_gn_5_31580 Lactuca sativa HOM05D000792 ORTHO05D004195 3.9e-13 80.5 54 70.4
CAN.G97.24 Capsicum annuum HOM05D002023 ORTHO05D002049 2.5e-12 77.8 117 39.3
Cfa025693 Carpinus fangiana HOM05D000792 ORTHO05D004195 3.3e-12 77.4 143 30.1
CSS0010028 Camellia sinensis var. sinensis HOM05D000792 ORTHO05D004195 4.0e-10 70.5 64 56.2
Lsat_1_v5_gn_3_96121 Lactuca sativa HOM05D000792 ORTHO05D004195 1.7e-08 65.1 64 56.2
Lsat_1_v5_gn_5_26640 Lactuca sativa HOM05D000792 ORTHO05D004195 8.4e-08 62.8 63 55.6


User provided reference genes

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