Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 3.9e-148 528.1 264 100.0
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.3e-124 449.9 254 87.8
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.6e-117 426.4 254 83.9
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 2.0e-107 392.9 254 79.9
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.0e-95 354.0 261 70.5
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.0e-87 327.4 261 66.7
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 3.2e-86 322.4 265 66.0
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 6.1e-85 318.2 259 65.6
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.8e-84 316.6 259 64.9
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 3.4e-83 312.4 258 67.1
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 6.3e-82 308.1 262 65.3
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 1.9e-78 296.6 258 65.5
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 5.6e-78 295.0 269 61.3
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.5e-75 287.0 263 62.7
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 2.0e-75 286.6 268 59.0
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 8.3e-74 281.2 265 60.4
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 8.3e-74 281.2 265 60.4
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 4.1e-73 278.9 275 56.0
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 4.1e-73 278.9 256 62.9
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.2e-72 277.3 270 59.6
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.3e-71 273.9 278 57.2
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 5.0e-71 271.9 266 57.1
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.5e-70 270.4 265 59.2
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.9e-70 270.0 265 58.5
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 2.5e-70 269.6 265 58.5
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.5e-70 269.6 265 58.5
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 3.3e-70 269.2 267 55.8
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 5.6e-70 268.5 258 59.3
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.6e-69 265.8 261 56.3
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 8.0e-69 264.6 219 63.0
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.4e-68 263.8 279 52.7
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 1.8e-68 263.5 277 53.4
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 2.3e-68 263.1 266 55.3
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 5.2e-68 261.9 275 55.3
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.8e-68 261.5 256 59.4
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 2.0e-67 260.0 278 55.0
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 5.8e-67 258.5 268 53.7
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.3e-66 257.3 244 57.0
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.3e-66 257.3 267 54.7
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 1.3e-66 257.3 277 52.7
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 2.9e-66 256.1 273 52.7
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 2.9e-66 256.1 267 54.3
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 2.9e-66 256.1 209 63.6
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 6.4e-66 255.0 279 51.6
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.9e-65 253.4 267 53.9
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 1.9e-65 253.4 269 54.6
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 2.4e-65 253.1 261 53.3
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 2.4e-65 253.1 266 53.8
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 4.1e-65 252.3 229 59.4
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 7.0e-65 251.5 268 53.0
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 7.0e-65 251.5 261 53.3
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 9.2e-65 251.1 269 53.2
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 9.2e-65 251.1 269 53.2
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 1.2e-64 250.8 261 53.3
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.2e-64 250.8 299 52.5
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.6e-64 250.4 264 53.0
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 1.6e-64 250.4 214 62.1
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 7.8e-64 248.1 278 54.0
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 7.8e-64 248.1 277 54.5
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.0e-63 247.7 231 55.8
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.3e-63 247.3 271 52.0
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.3e-63 246.5 178 67.4
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 3.0e-63 246.1 266 54.5
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 5.0e-63 245.4 258 54.7
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 6.6e-63 245.0 280 51.1
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.1e-62 244.2 276 53.6
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.1e-62 244.2 218 60.6
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.9e-62 243.4 253 55.3
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 1.9e-62 243.4 255 52.2
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 1.9e-62 243.4 258 53.9
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 3.3e-62 242.7 237 57.8
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 7.3e-62 241.5 212 60.4
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 9.5e-62 241.1 190 62.6
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 9.5e-62 241.1 180 66.1
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.1e-61 240.0 226 58.0
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 2.1e-61 240.0 216 59.7
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.8e-61 239.6 255 54.9
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 3.6e-61 239.2 254 56.7
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 3.6e-61 239.2 162 72.8
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 8.1e-61 238.0 269 52.8
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.1e-60 237.7 263 54.8
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.1e-60 237.7 230 55.7
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.8e-60 236.9 269 52.8
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 2.3e-60 236.5 253 56.1
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 1.2e-59 234.2 255 54.5
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 2.6e-59 233.0 181 66.9
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 3.4e-59 232.6 182 65.9
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 9.8e-59 231.1 231 55.8
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.9e-58 228.8 150 73.3
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 2.7e-56 223.0 272 48.9
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 3.5e-56 222.6 184 62.5
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 2.3e-55 219.9 189 59.8
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 1.1e-54 217.6 159 66.7
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.1e-54 217.6 159 68.6
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 3.3e-54 216.1 159 67.9
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 5.6e-54 215.3 139 72.7
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.8e-52 210.3 257 50.6
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 4.0e-52 209.1 161 67.7
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 1.2e-51 207.6 178 59.6
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 2.0e-51 206.8 130 80.0
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.7e-50 203.8 191 56.5
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 2.9e-50 203.0 210 55.2
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.1e-49 201.1 181 59.1
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 4.1e-49 199.1 263 47.1
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 5.6e-46 188.7 166 59.0
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 1.3e-42 177.6 124 75.8
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.4e-41 174.1 276 42.8
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.9e-41 173.7 295 42.0
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.5e-38 163.3 271 38.0
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 4.3e-38 162.5 158 51.9
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.6e-37 160.6 148 54.7
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.8e-36 157.1 149 55.0
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.1e-33 147.9 99 73.7
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.9e-33 147.1 175 46.3
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 3.5e-32 142.9 143 49.7
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 6.7e-23 112.1 78 67.9
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.5e-22 110.9 82 72.0
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 2.8e-21 106.7 68 73.5
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 9.3e-17 91.7 64 68.8
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.6e-16 90.9 78 51.3
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.7e-15 85.1 155 34.2
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 6.5e-10 68.9 49 61.2
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.4e-09 67.8 151 38.4
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 3.2e-09 66.6 37 86.5
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.2e-09 66.2 42 66.7
SEGI_18043 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 9.7e-06 55.1 58 51.7


User provided reference genes

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