Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G125900 Phaseolus vulgaris HOM05D005259 ORTHO05D006402 0.0e+00 1430.2 712 100.0
VMungo0720G1316 Vigna mungo HOM05D005259 ORTHO05D006402 5.3e-301 1037.3 772 74.0
Glyma.10G185100 Glycine max HOM05D005259 ORTHO05D006402 6.6e-275 950.7 769 67.5
Lj5g0013708 Lotus japonicus HOM05D005259 ORTHO05D006402 1.0e-158 564.7 767 47.8
Glyma.01G234600 Glycine max HOM05D005259 ORTHO05D006402 6.8e-131 472.2 767 42.0
Glyma.11G008300 Glycine max HOM05D005259 ORTHO05D006402 7.1e-128 462.2 766 42.2
Lalb_Chr02g0150411 Lupinus albus HOM05D005259 ORTHO05D006402 7.8e-127 458.8 757 42.5
Ca_09836_v3 Cicer arietinum L. HOM05D005259 ORTHO05D006402 2.4e-123 447.2 737 43.8
LjContig00222g0005017 Lotus japonicus HOM05D005259 ORTHO05D006402 2.0e-122 444.1 754 42.0
arahy.Tifrunner.gnm1.ann1.SM0BS0 Arachis hypogaea HOM05D005259 ORTHO05D006402 4.6e-119 433.0 770 41.2
VMungo1215G2763 Vigna mungo HOM05D005259 ORTHO05D006402 5.1e-118 429.5 767 39.8
Lalb_Chr09g0320051 Lupinus albus HOM05D005259 ORTHO05D006402 6.2e-116 422.5 759 42.3
Lalb_Chr06g0169311 Lupinus albus HOM05D005259 ORTHO05D006402 1.3e-113 414.8 752 41.8
Phvul.002G042000 Phaseolus vulgaris HOM05D005259 ORTHO05D006402 3.9e-110 403.3 707 40.9
Ca_24427_v3 Cicer arietinum L. HOM05D005259 ORTHO05D006402 1.4e-107 394.8 764 41.2
TPR.G27199 Trifolium pratense HOM05D005259 ORTHO05D006402 1.0e-105 388.7 728 41.1
TPR.G37888 Trifolium pratense HOM05D005259 ORTHO05D006402 6.1e-95 352.8 657 40.6
Medtr1g075280 Medicago truncatula HOM05D005259 ORTHO05D006402 1.3e-94 351.7 731 37.6
Medtr5g007040 Medicago truncatula HOM05D005259 ORTHO05D006402 8.5e-81 305.8 669 36.2
Psat2g189680 Pisum sativum HOM05D005259 ORTHO05D006402 6.3e-76 289.7 646 36.2
Cfa008379 Carpinus fangiana HOM05D005259 ORTHO05D006402 9.1e-75 285.8 758 32.5
QL06p015741 Quercus lobata HOM05D005259 ORTHO05D006402 4.5e-74 283.5 783 32.2
Atru.chr4.2229 Acer truncatum HOM05D005259 ORTHO05D006402 8.5e-73 279.3 786 32.3
arahy.Tifrunner.gnm1.ann1.YIX0R7 Arachis hypogaea HOM05D005259 ORTHO05D006402 3.9e-70 270.4 744 32.9
Ciclev10004215m.g Citrus clementina HOM05D005259 ORTHO05D006402 7.0e-67 259.6 801 30.3
Thecc.04G246200 Theobroma cacao HOM05D005259 ORTHO05D006402 9.1e-67 259.2 796 31.3
arahy.Tifrunner.gnm1.ann1.TEF2FC Arachis hypogaea HOM05D005259 ORTHO05D006402 1.2e-66 258.8 742 31.8
Psat4g092760 Pisum sativum HOM05D005259 ORTHO05D006402 6.5e-65 253.1 711 33.3
Duzib151G0402 Durio zibethinus HOM05D005259 ORTHO05D006402 1.6e-63 248.4 780 30.4
Duzib212G1015 Durio zibethinus HOM05D005259 ORTHO05D006402 4.4e-61 240.4 786 30.3
Duzib052G0218 Durio zibethinus HOM05D005259 ORTHO05D006402 1.7e-60 238.4 787 30.2
CiPaw.01G190300 Carya illinoinensis HOM05D005259 ORTHO05D001287 4.8e-60 236.9 765 29.4
Glyma.20G205250 Glycine max HOM05D005259 ORTHO05D006402 3.1e-59 234.2 167 73.7
COL.COLO4_15792 Corchorus olitorius HOM05D005259 ORTHO05D006402 2.9e-57 227.6 784 31.1
CSS0027429 Camellia sinensis var. sinensis HOM05D005259 ORTHO05D006402 5.0e-57 226.9 781 29.4
Potri.008G162500 Populus trichocarpa HOM05D005259 ORTHO05D006402 6.5e-57 226.5 790 30.5
CSS0043582 Camellia sinensis var. sinensis HOM05D005259 ORTHO05D006402 1.1e-56 225.7 788 29.7
Medtr6g046940 Medicago truncatula HOM05D005259 ORTHO05D006402 6.1e-55 219.9 649 31.4
CiPaw.02G116300 Carya illinoinensis HOM05D005259 ORTHO05D006402 8.8e-54 216.1 736 29.8
Glyma.20G205301 Glycine max HOM05D005259 ORTHO05D006402 7.5e-53 213.0 183 62.8
GSVIVG01018119001 Vitis vinifera HOM05D005259 ORTHO05D006402 1.3e-52 212.2 786 28.0
Prupe.1G030800 Prunus persica HOM05D005259 ORTHO05D006402 8.3e-52 209.5 777 30.0
TAR362G0225 Trochodendron aralioides HOM05D005259 ORTHO05D006402 8.3e-52 209.5 829 28.6
Sabra08G0123900 Salix brachista HOM05D005259 ORTHO05D006402 2.4e-51 208.0 787 29.0
Potri.010G076700 Populus trichocarpa HOM05D005259 ORTHO05D006402 4.1e-51 207.2 781 28.6
Manes.03G168800 Manihot esculenta HOM05D005259 ORTHO05D006402 5.9e-50 203.4 750 28.8
FAN17G1158 Fragaria x ananassa HOM05D005259 ORTHO05D006402 6.6e-49 199.9 791 28.2
FAN22G1888 Fragaria x ananassa HOM05D005259 ORTHO05D006402 5.5e-48 196.8 781 28.6
TAR633G1135 Trochodendron aralioides HOM05D005259 ORTHO05D006402 5.5e-48 196.8 809 27.2
arahy.Tifrunner.gnm1.ann1.7CP98C Arachis hypogaea HOM05D005259 ORTHO05D006402 1.6e-47 195.3 317 41.3
FvH4_4g02690 Fragaria vesca HOM05D005259 ORTHO05D006402 4.7e-47 193.7 798 28.6
FAN12G0451 Fragaria x ananassa HOM05D005259 ORTHO05D006402 1.4e-46 192.2 799 28.3
Hma1.2p1_0650F.1_g195420 Hydrangea macrophylla HOM05D005259 ORTHO05D006402 1.5e-45 188.7 767 26.7
TWI73G0531 Tripterygium wilfordii HOM05D005259 ORTHO05D006402 1.5e-45 188.7 792 26.5
Actinidia04478 Actinidia chinensis HOM05D005259 ORTHO05D002253 9.8e-45 186.0 778 26.9
MD16G1208700 Malus domestica HOM05D005259 ORTHO05D006402 6.3e-44 183.3 759 27.9
MD13G1207300 Malus domestica HOM05D005259 ORTHO05D006402 9.2e-43 179.5 788 27.4
Cpa.g.sc58.48 Carica papaya HOM05D005259 ORTHO05D006402 2.5e-40 171.4 773 27.3
RcHm_v2.0_Chr4g0390511 Rosa chinensis HOM05D005259 ORTHO05D006402 2.1e-39 168.3 787 27.8
Sabra10G0032100 Salix brachista HOM05D005259 ORTHO05D006402 1.0e-38 166.0 745 25.8
ClCG05G004600 Citrullus lanatus HOM05D005259 ORTHO05D006402 1.4e-38 165.6 774 27.1
MELO3C006469.2 Cucumis melo HOM05D005259 ORTHO05D006402 2.9e-36 157.9 766 26.9
CsaV3_3G012580 Cucumis sativus L. HOM05D005259 ORTHO05D006402 1.9e-35 155.2 779 27.5
Sed0002321 Sechium edule HOM05D005259 ORTHO05D006402 1.9e-35 155.2 786 27.0
Actinidia40086 Actinidia chinensis HOM05D005259 ORTHO05D006402 3.2e-35 154.5 587 28.1
Manes.15G037000 Manihot esculenta HOM05D005259 ORTHO05D006402 1.2e-34 152.5 726 25.5
Sed0017180 Sechium edule HOM05D005259 ORTHO05D006402 7.8e-34 149.8 758 26.6
MBI04_g07579_MAGBIO Magnolia biondii HOM05D005259 ORTHO05D006402 1.3e-33 149.1 828 24.2
Nn1g02609 Nelumbo nucifera HOM05D005259 ORTHO05D006402 1.1e-32 146.0 820 25.0
Dinv44635 Davidia involucrata HOM05D005259 ORTHO05D006402 8.1e-31 139.8 688 26.2
CAN.G1007.13 Capsicum annuum HOM05D005259 ORTHO05D006402 2.3e-30 138.3 726 23.8
Peaxi162Scf00813g00016 Petunia axillaris HOM05D005259 ORTHO05D006402 4.0e-30 137.5 744 24.2
Sc13g0005040 Simmondsia chinensis HOM05D005259 ORTHO05D006402 6.8e-30 136.7 777 26.5
vmacro08412 Vaccinium macrocarpon HOM05D005259 ORTHO05D006402 1.2e-29 136.0 724 26.0
Rhsim04G0190300 Rhododendron simsii HOM05D005259 ORTHO05D006402 7.5e-29 133.3 734 25.6
Sopen09g032310 Solanum pennellii HOM05D005259 ORTHO05D006402 1.7e-28 132.1 726 24.9
PSO832G3620 Papaver somniferum HOM05D005259 ORTHO05D006402 6.4e-28 130.2 633 25.6
PGSC0003DMG400001126 Solanum tuberosum HOM05D005259 ORTHO05D006402 9.2e-27 126.3 726 25.6
PSO210G6035 Papaver somniferum HOM05D005259 ORTHO05D006402 2.7e-26 124.8 641 25.9
Gorai.006G246800 Gossypium raimondii HOM05D005259 ORTHO05D006402 1.7e-25 122.1 639 26.8
Oeu049793.2 Olea europaea HOM05D005259 ORTHO05D006402 3.0e-25 121.3 441 28.6
Solyc09g083390.3 Solanum lycopersicum HOM05D005259 ORTHO05D006402 3.0e-25 121.3 620 25.2
Nitab4.5_0004798g0010 Nicotiana tabacum HOM05D005259 ORTHO05D006402 5.1e-25 120.6 749 23.1
Potri.008G162150 Populus trichocarpa HOM05D005259 ORTHO05D006402 6.6e-25 120.2 468 28.8
Gohir.A09G223300 Gossypium hirsutum HOM05D005259 ORTHO05D006402 1.1e-24 119.4 690 26.4
Eucgr.H03158 Eucalyptus grandis HOM05D005259 ORTHO05D006402 2.5e-24 118.2 506 27.1
Cc03_g04860 Coffea canephora HOM05D005259 ORTHO05D006402 1.6e-23 115.5 455 26.8
Gohir.D09G225300 Gossypium hirsutum HOM05D005259 ORTHO05D006402 2.1e-23 115.2 635 26.5
MSTRG.9924 Avicennia marina HOM05D005259 ORTHO05D006402 4.7e-23 114.0 756 23.0
MSTRG.24702 Avicennia marina HOM05D005259 ORTHO05D006402 8.1e-23 113.2 531 26.6
Nn3g19539 Nelumbo nucifera HOM05D005259 ORTHO05D006402 8.1e-23 113.2 827 23.5
Aqoxy5G00317 Aquilegia oxysepala HOM05D005259 ORTHO05D006402 7.1e-19 100.1 829 22.9
Dinv29910 Davidia involucrata HOM05D005259 ORTHO05D006402 6.6e-17 93.6 169 40.2
DCAR_002351 Daucus carota HOM05D005259 ORTHO05D006402 2.1e-15 88.6 444 27.0
MBI04_g45851_MAGBIO Magnolia biondii HOM05D005259 ORTHO05D006402 2.1e-15 88.6 412 24.5
Sp2g08420 Schrenkiella parvula HOM05D005259 ORTHO05D006402 1.4e-14 85.9 622 24.0
Migut.N00239 Erythranthe guttata HOM05D005259 ORTHO05D006402 1.8e-14 85.5 437 25.4
Migut.G00437 Erythranthe guttata HOM05D005259 ORTHO05D006402 3.1e-14 84.7 524 26.1
Actinidia08442 Actinidia chinensis HOM05D005259 ORTHO05D006402 1.7e-12 79.0 520 24.6
Oeu003588.2 Olea europaea HOM05D005259 ORTHO05D006402 1.4e-11 75.9 375 27.7
Thhalv10003150m.g Eutrema salsugineum HOM05D005259 ORTHO05D006402 2.4e-11 75.1 699 23.5
Haze_11300 Corylus avellana HOM05D005259 ORTHO05D006402 2.1e-10 72.0 230 31.3
Aa31LG5G3600 Aethionema arabicum HOM05D005259 ORTHO05D006402 1.5e-08 65.9 422 25.4
Nitab4.5_0000525g0240 Nicotiana tabacum HOM05D005259 ORTHO05D006402 2.5e-08 65.1 106 35.8
Carub.0008s0502 Capsella rubella HOM05D005259 ORTHO05D006402 5.6e-08 63.9 429 24.0
BcaC06g31686 Brassica carinata HOM05D005259 ORTHO05D006402 1.6e-07 62.4 363 25.6
AT5G43630 Arabidopsis thaliana HOM05D005259 ORTHO05D006402 4.8e-07 60.8 718 22.0
BcaC06g34639 Brassica carinata HOM05D005259 ORTHO05D006402 6.2e-07 60.5 299 25.8
C07p26220 Brassica napus HOM05D005259 ORTHO05D006402 6.2e-07 60.5 299 25.8
BolC7t43150H Brassica oleracea HOM05D005259 ORTHO05D006402 6.2e-07 60.5 299 25.8
Lj6A656T72 Lonicera japonica HOM05D005259 ORTHO05D006402 6.2e-07 60.5 106 35.8
BraA06t27646Z Brassica rapa HOM05D005259 ORTHO05D006402 3.1e-06 58.2 345 27.0
A06p47780 Brassica napus HOM05D005259 ORTHO05D006402 5.3e-06 57.4 345 27.0


User provided reference genes

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