Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G105266 Phaseolus vulgaris HOM05D007651 ORTHO05D000898 6.3e-60 233.8 110 100.0
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.7e-25 119.4 109 58.7
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 1.6e-15 86.3 108 45.4
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 8.1e-15 84.0 107 45.8
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 1.4e-14 83.2 106 45.3
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 1.8e-14 82.8 107 46.7
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 9.0e-14 80.5 108 45.4
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 9.0e-14 80.5 108 45.4
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 1.5e-13 79.7 108 44.4
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 2.0e-13 79.3 108 46.3
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 1.3e-12 76.6 105 43.8
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 2.9e-12 75.5 121 42.1
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 4.9e-12 74.7 106 44.3
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 6.4e-12 74.3 107 41.1
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 8.4e-12 73.9 107 42.1
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 8.4e-12 73.9 108 42.6
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.9e-11 72.8 107 42.1
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 1.9e-11 72.8 107 43.9
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 9.3e-11 70.5 108 40.7
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 1.2e-10 70.1 105 44.8
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 2.1e-10 69.3 125 36.8
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 2.7e-10 68.9 125 36.8
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 3.5e-10 68.6 96 43.8
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 3.5e-10 68.6 96 43.8
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 7.8e-10 67.4 125 36.0
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 1.0e-09 67.0 96 42.7
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 1.0e-09 67.0 96 42.7
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 1.0e-09 67.0 96 42.7
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 1.3e-09 66.6 108 42.6
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 1.3e-09 66.6 105 38.1
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 1.3e-09 66.6 108 38.9
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 1.7e-09 66.2 97 43.3
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 2.3e-09 65.9 109 40.4
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 3.0e-09 65.5 96 41.7
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 1.5e-08 63.2 73 50.7
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 1.5e-08 63.2 78 47.4
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 1.9e-08 62.8 105 41.0
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 1.9e-08 62.8 96 40.6
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.3e-08 62.0 78 48.7
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 3.3e-08 62.0 78 48.7
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 9.6e-08 60.5 78 46.2
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 3.1e-06 55.5 92 40.2


User provided reference genes

Program Settings