Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 0.0e+00 3061.6 1755 100.0
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 0.0e+00 2316.6 1668 77.2
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 0.0e+00 2283.4 1667 76.3
VMungo0720G0327 Vigna mungo HOM05D004493 ORTHO05D005117 0.0e+00 2172.1 1412 85.8
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 0.0e+00 1768.1 1682 63.2
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 0.0e+00 1683.7 1667 60.5
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 0.0e+00 1677.5 1688 59.2
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 0.0e+00 1651.7 1786 61.2
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 0.0e+00 1629.8 1799 59.4
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 0.0e+00 1629.0 1755 56.4
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 0.0e+00 1546.6 1683 56.2
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 0.0e+00 1084.3 1748 43.5
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 0.0e+00 1082.0 1749 43.7
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 1.1e-307 1060.8 1725 43.3
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 8.8e-297 1024.6 935 61.7
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 2.1e-290 1003.4 1732 42.6
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 4.4e-288 995.7 1695 42.8
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 1.7e-287 993.8 1756 40.4
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 8.6e-284 981.5 1710 41.5
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 8.6e-284 981.5 1710 41.5
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 6.3e-279 965.3 1726 42.1
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 7.0e-278 961.8 1722 40.6
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 5.6e-275 952.2 1779 40.8
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 2.8e-274 949.9 1741 41.3
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 3.6e-274 949.5 1770 41.4
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 6.1e-274 948.7 1768 41.5
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 6.0e-269 932.2 1764 39.6
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 1.9e-267 927.2 1702 43.1
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 4.3e-267 926.0 1771 39.8
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 8.3e-263 911.8 1736 42.2
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 9.2e-262 908.3 1697 39.3
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 3.5e-261 906.4 1690 40.2
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 8.9e-257 891.7 1810 37.3
Atru.chr3.2057 Acer truncatum HOM05D004493 ORTHO05D005117 5.1e-252 875.9 1685 39.7
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 6.6e-252 875.5 1701 38.8
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 2.0e-248 864.0 1822 36.4
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 5.4e-246 855.9 1698 39.0
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 5.4e-246 855.9 1772 39.1
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 3.3e-243 846.7 1790 36.7
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 4.3e-243 846.3 1722 37.8
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 8.1e-242 842.0 1698 38.6
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 2.6e-240 837.0 1765 39.0
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 1.7e-239 834.3 1733 38.7
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 1.4e-238 831.2 1822 36.8
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 1.4e-238 831.2 1809 36.9
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 4.2e-238 829.7 1777 36.7
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 5.4e-238 829.3 1733 38.7
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.3e-234 818.1 1626 38.0
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 2.1e-234 817.4 1803 35.6
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 1.1e-233 815.1 1688 38.1
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 3.1e-233 813.5 1747 38.6
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 1.1e-230 805.1 1789 36.3
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 9.3e-230 802.0 1720 37.1
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 3.3e-227 793.5 1852 35.7
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 4.0e-225 786.6 1746 37.5
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 5.8e-224 782.7 1684 37.0
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 1.0e-223 781.9 1633 37.7
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.9e-219 767.7 1839 36.1
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 1.0e-215 755.4 1700 35.6
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 1.0e-215 755.4 1785 34.9
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 1.4e-214 751.5 1705 36.0
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 4.2e-214 750.0 1763 35.5
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 4.2e-214 750.0 2124 32.6
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 4.8e-210 736.5 1698 35.4
QL01p007875 Quercus lobata HOM05D004493 ORTHO05D005117 1.8e-209 734.6 1251 41.3
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 2.7e-205 720.7 1684 36.8
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 3.0e-204 717.2 1766 35.4
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 1.1e-203 715.3 1708 35.0
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 1.2e-200 705.3 1669 37.3
Eucgr.J01744 Eucalyptus grandis HOM05D004493 ORTHO05D005117 3.6e-197 693.7 1587 36.4
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 1.0e-196 692.2 1770 33.2
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 1.4e-188 665.2 1691 36.1
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 4.4e-187 660.2 1052 40.7
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 6.8e-180 636.3 1723 33.5
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 1.5e-179 635.2 1726 33.0
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 7.5e-179 632.9 1717 32.1
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 6.3e-178 629.8 1668 32.8
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 6.8e-172 609.8 1765 32.0
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 5.4e-169 600.1 1698 31.9
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 1.4e-161 575.5 1634 32.4
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.3e-159 568.9 1653 32.2
Sc06g0004140 Simmondsia chinensis HOM05D004493 ORTHO05D005117 4.7e-141 507.3 1465 32.3
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 8.6e-135 486.5 1804 28.9
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 5.8e-131 473.8 740 40.9
Hund28035 Selenicereus undatus HOM05D004493 ORTHO05D005117 4.9e-130 470.7 1438 31.4
Hund28037 Selenicereus undatus HOM05D004493 ORTHO05D005117 4.9e-130 470.7 1438 31.4
Gohir.A08G083000 Gossypium hirsutum HOM05D004493 ORTHO05D005117 1.3e-127 462.6 1006 39.3
Nitab4.5_0000075g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 5.8e-115 420.6 783 37.3
VMungo0720G2527 Vigna mungo HOM05D004493 ORTHO05D005117 1.9e-113 415.6 241 86.3
COL.COLO4_35068 Corchorus olitorius HOM05D004493 ORTHO05D005117 9.3e-113 413.3 936 35.9
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 1.5e-107 396.0 874 33.9
Ah.06g182270 Amaranthus hybridus HOM05D004493 ORTHO05D005117 8.4e-106 390.2 433 46.7
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.8e-101 375.2 871 38.9
Lj2A889G19 Lonicera japonica HOM05D004493 ORTHO05D005117 1.4e-89 336.3 877 31.8
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 1.1e-86 326.6 1116 26.9
Nitab4.5_0000075g0170 Nicotiana tabacum HOM05D004493 ORTHO05D005117 1.1e-81 310.1 945 34.0
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 3.6e-80 305.1 1015 28.7
Ah.06g182280 Amaranthus hybridus HOM05D004493 ORTHO05D005117 2.8e-77 295.4 945 34.6
Peaxi162Scf00186g00168 Petunia axillaris HOM05D004493 ORTHO05D005117 1.7e-74 286.2 874 34.3
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis HOM05D004493 ORTHO05D005117 2.0e-70 272.7 1037 27.6
Solyc02g032480.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 7.5e-70 270.8 622 33.8
CDE02G1557 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 5.3e-68 264.6 1002 30.8
Peaxi162Scf00186g01612 Petunia axillaris HOM05D004493 ORTHO05D005117 1.2e-67 263.5 589 34.8
Eucgr.J01742 Eucalyptus grandis HOM05D004493 ORTHO05D005117 3.5e-67 261.9 469 36.0
Pp3c13_12950 Physcomitrium patens HOM05D004493 ORTHO05D005117 8.5e-66 257.3 1721 25.3
MSTRG.929 Avicennia marina HOM05D004493 ORTHO05D005117 5.9e-59 234.6 832 33.1
Solyc02g032380.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 8.8e-55 220.7 475 36.2
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 1.3e-53 216.9 220 54.1
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.1e-49 203.8 167 63.5
Hund05058 Selenicereus undatus HOM05D004493 ORTHO05D005117 3.3e-49 202.2 233 49.8
QL01p007909 Quercus lobata HOM05D004453 ORTHO05D005375 2.3e-47 196.1 560 36.2
CDE02G2692 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 4.0e-47 195.3 233 46.4
Eucgr.J01832 Eucalyptus grandis HOM05D004493 ORTHO05D005117 2.9e-45 189.1 146 56.8
BcaNung06979 Brassica carinata HOM05D004493 ORTHO05D005117 1.1e-44 187.2 184 52.2
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.4e-44 186.8 191 53.4
vmacro09616 Vaccinium macrocarpon HOM05D004493 ORTHO05D005117 9.5e-41 174.1 679 32.4
Potri.001G001201 Populus trichocarpa HOM05D004493 ORTHO05D005117 1.0e-39 170.6 230 47.4
Dinv13491 Davidia involucrata HOM05D004493 ORTHO05D005117 2.3e-39 169.5 673 32.2
QL01p007891 Quercus lobata HOM05D004493 ORTHO05D005117 3.1e-39 169.1 282 46.5
Solyc02g032490.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 4.0e-39 168.7 192 49.0
SEGI_27502 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 8.3e-37 161.0 985 28.6
Hma1.2p1_0589F.1_g184750 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 4.3e-33 148.7 453 31.3
Lj2A889T20 Lonicera japonica HOM05D004493 ORTHO05D005117 2.4e-28 132.9 399 35.6
ATR0906G002 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.3e-26 127.1 198 38.9
Solyc02g032450.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 1.3e-26 127.1 248 39.9
CSS0040729 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 2.3e-26 126.3 129 55.0
Peaxi162Scf00186g01613 Petunia axillaris HOM05D004493 ORTHO05D005117 1.9e-25 123.2 187 40.1
Zm00001eb202920 Zea mays HOM05D004493 ORTHO05D005117 1.6e-24 120.2 121 47.9
CSS0001625 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 4.4e-22 112.1 91 54.9
Cpa.g.sc119.16 Carica papaya HOM05D004493 ORTHO05D005117 4.4e-22 112.1 80 70.0
FAN03G1805 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.3e-21 110.5 216 33.8
MSTRG.12812 Avicennia marina HOM05D004493 ORTHO05D005117 6.4e-21 108.2 129 45.7
SMO167G0064 Selaginella moellendorffii HOM05D004493 ORTHO05D005117 1.9e-17 96.7 420 25.0
SEGI_28014 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 1.6e-16 93.6 192 32.3
ATR0906G001 Amborella trichopoda HOM05D004493 ORTHO05D005117 2.1e-16 93.2 929 24.1
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 3.6e-16 92.4 68 61.8
MSTRG.12811 Avicennia marina HOM05D004493 ORTHO05D005117 6.9e-15 88.2 114 50.0
SEGI_11629 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 1.2e-14 87.4 126 40.5
FAN14G4108 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.3e-13 84.0 152 37.5
FAN26G0295 Fragaria x ananassa HOM05D000290 ORTHO05D006676 9.3e-12 77.8 68 52.9
FAN14G5048 Fragaria x ananassa HOM05D004493 ORTHO05D005117 4.6e-11 75.5 63 54.0
Os07g0685400 Oryza sativa ssp. japonica HOM05D004493 ORTHO05D005117 1.0e-10 74.3 149 39.6
unitig_0.g1240 Utricularia gibba HOM05D004493 ORTHO05D005117 3.9e-10 72.4 272 35.3
QL04p013873 Quercus lobata HOM05D004493 ORTHO05D005117 5.1e-10 72.0 65 52.3
FAN12G3781 Fragaria x ananassa HOM05D004493 ORTHO05D005117 8.7e-10 71.2 53 60.4
Cre07.g313500 Chlamydomonas reinhardtii HOM05D051285 ORTHO05D005117 1.5e-06 60.5 389 22.9
FAN10G2778 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.6e-06 59.7 47 53.2
CDE02G0298 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 7.6e-06 58.2 55 50.9


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