Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.3e-185 652.9 339 100.0
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 2.6e-165 585.5 339 91.2
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 3.1e-158 562.0 342 86.8
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 1.7e-143 513.1 341 79.8
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 3.1e-142 508.8 332 81.0
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.6e-141 506.5 339 78.8
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 2.9e-140 502.3 331 80.7
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 6.1e-138 494.6 327 79.8
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 8.9e-137 490.7 329 78.4
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.5e-136 490.0 324 79.0
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 5.0e-132 474.9 331 74.9
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 4.3e-131 471.9 337 73.6
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 3.0e-129 465.7 341 73.0
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 3.4e-128 462.2 320 75.3
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 6.4e-127 458.0 332 74.7
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.4e-126 456.1 320 72.5
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 6.6e-124 448.0 315 73.7
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.1e-123 447.2 326 70.6
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 2.5e-123 446.0 328 71.6
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 1.2e-122 443.7 319 70.8
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 2.8e-122 442.6 331 70.7
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 4.7e-122 441.8 332 69.6
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 1.1e-121 440.7 339 68.4
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.1e-121 440.7 341 68.0
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.4e-121 440.3 339 69.6
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 5.2e-121 438.3 321 70.4
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.0e-120 436.4 321 70.1
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 2.6e-120 436.0 321 69.8
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 7.5e-120 434.5 332 67.2
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 9.8e-120 434.1 329 69.0
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-119 433.7 329 69.0
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.3e-119 431.0 331 68.6
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.3e-119 431.0 329 67.8
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.3e-119 431.0 329 68.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.4e-118 430.3 329 67.8
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.4e-118 429.5 329 67.8
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.6e-117 426.8 330 69.1
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 4.6e-117 425.2 322 65.8
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 2.3e-116 422.9 339 67.0
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.3e-116 422.9 341 62.8
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.3e-116 422.9 341 62.8
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 2.8e-114 416.0 331 69.5
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 8.1e-114 414.5 331 64.0
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.1e-113 412.5 324 64.5
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.1e-113 412.5 324 64.5
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 2.0e-112 409.8 318 66.0
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 2.0e-112 409.8 319 65.5
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 4.4e-112 408.7 325 63.4
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 9.9e-112 407.5 329 64.4
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 9.9e-112 407.5 327 66.1
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 9.9e-112 407.5 321 65.4
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.3e-111 407.1 325 63.4
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 4.9e-111 405.2 324 64.5
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.4e-110 403.7 331 62.8
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 1.9e-110 403.3 325 65.5
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 2.4e-110 402.9 328 64.3
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 3.2e-110 402.5 328 64.6
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 3.2e-110 402.5 323 64.7
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 3.2e-110 402.5 325 65.5
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 7.1e-110 401.4 321 64.5
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 9.2e-110 401.0 321 65.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 9.2e-110 401.0 328 64.0
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.2e-109 400.6 316 66.8
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 2.7e-109 399.4 324 63.6
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 2.7e-109 399.4 318 64.5
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 3.5e-109 399.1 323 64.4
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 3.9e-108 395.6 341 66.9
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 8.6e-108 394.4 327 61.8
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 3.3e-107 392.5 333 61.3
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 4.3e-107 392.1 341 61.6
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 6.2e-106 388.3 331 61.6
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 1.1e-105 387.5 340 59.4
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.8e-105 386.7 338 60.1
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 2.4e-105 386.3 302 65.9
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 6.8e-105 384.8 305 65.6
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.2e-103 379.8 336 59.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.9e-103 379.4 324 62.0
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 3.8e-103 379.0 327 61.2
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.2e-101 374.0 286 65.7
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 2.1e-101 373.2 269 67.7
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 6.0e-101 371.7 330 58.5
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.7e-100 370.2 325 59.4
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 6.6e-100 368.2 319 59.6
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 8.7e-100 367.9 328 59.8
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.5e-99 367.1 265 69.4
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 4.0e-97 359.0 333 57.7
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 6.2e-90 335.1 236 69.9
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.0e-88 330.1 327 56.0
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 4.3e-83 312.4 280 59.3
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.6e-82 310.5 341 51.0
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.1e-82 310.1 331 55.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 6.4e-79 298.5 320 50.9
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.6e-77 293.9 328 51.8
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 6.0e-77 292.0 329 50.8
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 4.0e-73 279.3 335 46.0
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.0e-68 263.1 199 66.8
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 4.3e-67 259.2 326 45.7
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.7e-66 256.1 324 47.8
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.9e-63 246.5 225 60.0
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 4.2e-62 242.7 186 65.6
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 9.4e-62 241.5 161 77.6
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 9.7e-59 231.5 186 64.5
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 5.0e-55 219.2 199 59.3
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.3e-47 194.5 255 45.1
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.7e-37 159.5 108 71.3
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.3e-36 157.1 108 70.4
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.2e-31 140.6 90 75.6
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 3.1e-25 120.2 269 31.2
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 5.5e-22 109.4 113 56.6
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.2e-21 108.2 122 48.4
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.1e-17 93.2 82 64.6
MCO05G070 Micromonas commoda HOM05D002465 ORTHO05D008860 2.2e-10 70.9 224 26.3
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.7e-07 61.2 79 51.9


User provided reference genes

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