Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.4e-262 909.1 456 100.0
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 1.5e-256 889.0 456 97.6
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 1.3e-252 875.9 456 95.8
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 3.7e-247 857.8 456 93.6
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 4.2e-243 844.3 456 92.1
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 8.0e-242 840.1 456 92.5
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 1.8e-241 839.0 456 91.9
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 1.2e-237 826.2 456 90.4
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 3.8e-236 821.2 456 90.8
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 4.7e-234 814.3 458 88.4
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 6.1e-234 813.9 458 88.4
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 2.2e-231 805.4 458 88.2
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 5.6e-227 790.8 458 86.0
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 9.5e-227 790.0 456 86.0
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 1.0e-225 786.6 455 85.3
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 1.4e-225 786.2 456 86.2
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 8.9e-225 783.5 456 85.1
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 1.2e-224 783.1 464 85.3
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 5.8e-224 780.8 456 85.1
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 7.5e-224 780.4 456 85.7
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.7e-223 779.2 456 84.0
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 1.9e-222 775.8 456 84.6
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 4.1e-222 774.6 456 84.6
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 5.4e-222 774.2 457 85.6
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 7.0e-222 773.9 456 84.9
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 9.2e-222 773.5 457 85.3
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 9.2e-222 773.5 457 85.3
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 9.2e-222 773.5 456 84.9
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 2.0e-221 772.3 449 85.5
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 3.5e-221 771.5 456 84.6
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 3.5e-221 771.5 456 84.6
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 4.6e-221 771.2 464 84.7
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 4.6e-221 771.2 456 83.1
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 4.6e-221 771.2 450 85.8
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 3.9e-220 768.1 456 83.8
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 5.0e-220 767.7 457 83.8
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 8.6e-220 766.9 456 83.8
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 2.5e-219 765.4 427 87.8
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 2.5e-219 765.4 456 84.4
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 3.3e-219 765.0 427 89.0
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 3.3e-219 765.0 456 83.6
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 1.2e-218 763.1 460 83.0
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 6.2e-218 760.8 427 88.1
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 1.4e-217 759.6 462 83.1
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 6.8e-217 757.3 462 82.3
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 6.8e-217 757.3 457 82.5
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 1.5e-216 756.1 458 82.3
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 2.0e-216 755.7 457 82.3
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 4.4e-216 754.6 430 87.2
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 4.4e-216 754.6 462 82.0
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 4.4e-216 754.6 462 81.8
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 5.8e-216 754.2 455 82.4
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.2e-215 752.3 457 82.3
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.9e-215 751.9 462 81.8
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 2.9e-215 751.9 451 83.4
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 3.7e-215 751.5 451 83.4
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 4.9e-215 751.1 454 82.8
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 6.4e-215 750.7 437 85.8
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 8.3e-215 750.4 462 81.6
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 1.1e-214 750.0 451 82.9
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.4e-214 749.6 459 82.4
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.4e-214 749.6 459 82.4
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 1.9e-214 749.2 457 81.8
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 1.9e-214 749.2 421 87.6
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 4.1e-214 748.0 459 82.1
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 4.1e-214 748.0 459 82.1
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 5.4e-214 747.7 459 82.1
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 5.4e-214 747.7 459 82.1
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 5.4e-214 747.7 427 86.2
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 7.1e-214 747.3 506 76.3
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 9.2e-214 746.9 457 81.6
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 9.2e-214 746.9 464 79.7
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.2e-213 746.5 455 81.8
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 7.8e-213 743.8 463 79.7
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 1.7e-212 742.7 452 81.4
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 3.0e-212 741.9 461 82.2
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 3.0e-212 741.9 427 85.5
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 8.6e-212 740.3 477 79.2
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 1.9e-211 739.2 429 86.7
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 1.9e-211 739.2 429 86.7
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 3.3e-211 738.4 421 86.5
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 1.4e-209 733.0 413 86.7
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 2.3e-209 732.3 463 78.4
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 3.1e-209 731.9 410 87.6
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 3.4e-208 728.4 425 85.6
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 9.9e-208 726.9 464 79.1
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 1.7e-207 726.1 427 84.3
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 1.9e-206 722.6 466 79.0
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 9.2e-206 720.3 427 84.1
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 2.1e-205 719.2 440 81.6
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 1.3e-204 716.5 427 82.9
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 2.3e-204 715.7 461 80.7
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.1e-203 713.4 463 77.8
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 2.8e-202 708.8 430 81.2
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 1.2e-200 703.4 413 82.8
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 1.5e-200 703.0 438 80.4
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 3.4e-200 701.8 465 75.7
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 1.1e-198 696.8 391 87.0
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 1.4e-193 679.9 455 76.7
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 3.1e-193 678.7 384 87.0
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 3.1e-193 678.7 470 74.5
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.3e-191 673.3 384 86.2
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 1.1e-190 670.2 524 68.1
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 2.4e-190 669.1 459 75.6
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 4.6e-189 664.8 413 79.4
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 7.9e-189 664.1 397 83.4
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 2.3e-188 662.5 460 74.8
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 5.6e-187 657.9 410 79.5
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 5.6e-187 657.9 452 74.8
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 2.1e-181 639.4 427 74.5
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 2.1e-181 639.4 444 73.9
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 1.3e-180 636.7 414 76.6
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 5.1e-180 634.8 457 72.6
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 6.2e-178 627.9 413 76.0
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 1.5e-176 623.2 469 67.8
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 2.9e-175 619.0 409 74.3
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 2.1e-170 602.8 415 72.0
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.4e-166 590.1 481 66.3
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 1.4e-161 573.5 441 68.7
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.4e-153 547.0 551 56.3
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 2.4e-153 546.2 330 83.0
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 2.8e-146 522.7 429 59.9
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 8.8e-140 501.1 330 76.7
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 6.8e-132 474.9 411 58.9
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 1.3e-122 444.1 369 61.0
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 5.9e-120 435.3 401 57.9
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 2.9e-114 416.4 252 81.0
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 7.0e-113 411.8 275 74.9
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.2e-112 411.0 411 52.6
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.3e-106 391.0 443 49.9
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 2.6e-83 313.5 173 89.6
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 3.9e-79 299.7 189 82.5
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 7.3e-78 295.4 310 52.9
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 9.6e-78 295.0 390 43.8
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 1.1e-62 245.0 358 41.3
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 2.5e-57 227.3 136 77.2
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 7.4e-46 189.1 117 81.2
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.1e-44 185.3 424 33.3
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 1.8e-31 141.4 143 54.5
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 3.7e-29 133.7 72 87.5
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 8.2e-29 132.5 81 87.7
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 3.1e-28 130.6 80 81.2
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 1.7e-21 108.2 67 86.6
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 2.2e-21 107.8 103 59.2
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 6.3e-21 106.3 76 71.1
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 3.2e-17 94.0 61 75.4
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 4.0e-15 87.0 81 61.7
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 5.2e-15 86.7 296 28.0
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 1.5e-09 68.6 50 64.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 6.1e-08 63.2 46 65.2
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 6.1e-08 63.2 46 65.2
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 4.0e-07 60.5 77 46.8
AUR62002710 Chenopodium quinoa HOM05D004870 ORTHO05D138226 6.8e-07 59.7 54 61.1


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