Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 1.7e-94 349.4 180 100.0
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 1.9e-90 335.9 180 96.1
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 3.0e-83 312.0 182 90.1
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 3.4e-79 298.5 182 85.7
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 6.5e-78 294.3 166 92.2
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 2.8e-73 278.9 180 83.3
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 3.1e-72 275.4 165 84.8
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 2.0e-71 272.7 177 80.8
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 2.6e-71 272.3 179 77.1
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 4.5e-71 271.6 178 79.2
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 1.3e-70 270.0 178 77.0
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 5.0e-70 268.1 178 77.5
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 1.1e-69 266.9 178 78.7
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.9e-69 266.2 178 78.7
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 3.2e-69 265.4 178 75.3
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 4.2e-69 265.0 176 79.5
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 1.6e-68 263.1 178 77.0
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 2.1e-68 262.7 179 78.8
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 2.7e-68 262.3 174 81.0
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 4.6e-68 261.5 151 85.4
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 6.1e-68 261.2 178 76.4
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 6.1e-68 261.2 178 76.4
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 1.0e-67 260.4 178 76.4
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 1.3e-67 260.0 180 76.7
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 3.0e-67 258.8 178 74.2
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 8.7e-67 257.3 176 76.7
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 8.7e-67 257.3 178 74.7
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 8.7e-67 257.3 178 74.7
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 1.1e-66 256.9 178 76.4
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 1.1e-66 256.9 178 76.4
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 1.9e-66 256.1 179 74.3
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.9e-66 256.1 179 74.3
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 2.5e-66 255.8 179 78.8
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 3.3e-66 255.4 178 71.3
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.3e-66 255.0 150 83.3
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 7.4e-66 254.2 178 73.6
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 9.7e-66 253.8 179 72.6
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.3e-65 253.4 168 76.2
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 1.3e-65 253.4 178 75.3
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 2.2e-65 252.7 178 75.3
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 8.2e-65 250.8 178 74.2
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.4e-64 250.0 179 73.7
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 2.4e-64 249.2 179 72.1
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 6.9e-64 247.7 177 74.0
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 9.1e-64 247.3 178 73.0
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 1.2e-63 246.9 178 74.2
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 1.2e-63 246.9 178 74.2
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 2.6e-63 245.7 173 74.0
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.6e-63 245.7 179 71.5
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 4.5e-63 245.0 178 70.2
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 4.5e-63 245.0 169 75.7
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 7.7e-63 244.2 174 71.3
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 1.3e-62 243.4 178 71.9
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 1.7e-62 243.0 178 71.3
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 1.7e-62 243.0 177 70.6
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.7e-62 243.0 178 73.0
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 2.9e-62 242.3 179 70.9
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 3.8e-62 241.9 179 70.9
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 6.5e-62 241.1 151 80.8
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 8.5e-62 240.7 178 70.8
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.9e-61 239.6 179 70.4
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 4.2e-61 238.4 165 74.5
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 7.2e-61 237.7 180 68.9
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 1.2e-60 236.9 166 72.9
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 3.6e-60 235.3 181 67.4
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 1.4e-59 233.4 181 70.7
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 8.8e-59 230.7 178 68.5
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 1.1e-58 230.3 147 77.6
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 1.5e-58 229.9 157 71.3
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 9.7e-58 227.3 135 82.2
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 9.7e-58 227.3 178 69.7
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 2.2e-57 226.1 173 65.9
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 1.8e-56 223.0 207 60.9
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 2.4e-56 222.6 172 66.3
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 4.1e-56 221.9 178 66.9
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 6.9e-56 221.1 151 76.2
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 6.9e-56 221.1 151 76.2
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 9.1e-56 220.7 172 65.7
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.5e-55 219.9 166 68.7
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.5e-55 219.9 181 64.1
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 4.5e-55 218.4 180 66.1
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 1.3e-54 216.9 173 65.3
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 1.7e-54 216.5 172 65.7
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 1.4e-53 213.4 173 64.2
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 1.4e-53 213.4 138 77.5
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 1.9e-53 213.0 178 63.5
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 4.2e-53 211.8 181 65.7
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 4.2e-53 211.8 138 77.5
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 1.8e-51 206.5 237 52.7
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 2.3e-51 206.1 137 75.9
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 5.2e-51 204.9 138 74.6
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 5.2e-51 204.9 133 75.2
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 2.6e-50 202.6 122 81.1
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 7.4e-50 201.1 164 65.9
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 2.2e-49 199.5 162 63.6
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 3.7e-49 198.7 134 70.9
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 4.8e-49 198.4 162 63.0
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 4.8e-49 198.4 162 63.0
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 1.1e-48 197.2 124 78.2
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.4e-48 196.8 166 65.7
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 1.8e-48 196.4 162 62.3
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 1.8e-48 196.4 157 66.2
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 3.1e-48 195.7 144 67.4
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 3.1e-48 195.7 164 64.6
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 5.9e-47 191.4 184 60.9
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 6.5e-46 188.0 107 85.0
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 1.9e-45 186.4 134 67.9
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 7.2e-45 184.5 161 64.0
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 3.6e-44 182.2 124 74.2
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.0e-42 176.4 124 72.6
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 1.2e-39 167.2 147 59.2
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 7.7e-39 164.5 142 62.0
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 1.1e-37 160.6 176 51.7
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 6.1e-36 154.8 178 53.9
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.8e-33 146.0 178 52.8
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 4.8e-33 145.2 184 45.7
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 8.3e-33 144.4 178 44.9
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 5.4e-32 141.7 113 61.1
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 3.8e-30 135.6 167 49.1
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 8.8e-27 124.4 99 62.6
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 9.8e-26 120.9 135 49.6
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 1.3e-25 120.6 118 54.2
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 1.4e-24 117.1 104 56.7
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 1.3e-22 110.5 80 68.8
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 2.3e-22 109.8 123 53.7
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.3e-21 105.5 72 73.6
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 6.8e-19 98.2 85 60.0
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-17 92.4 135 40.7
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 5.0e-14 82.0 82 57.3
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 2.3e-11 73.2 50 62.0
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 7.0e-08 61.6 61 59.0
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 4.6e-07 58.9 35 80.0
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 4.6e-07 58.9 113 38.1
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 1.7e-06 57.0 42 71.4
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 2.3e-06 56.6 120 35.8


User provided reference genes

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