Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 3.0e-143 511.9 276 100.0
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 1.1e-129 466.8 306 84.6
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 1.4e-111 406.8 279 81.4
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 7.5e-110 401.0 277 82.3
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 3.0e-82 309.3 335 59.1
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 5.1e-82 308.5 335 59.1
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 4.7e-80 302.0 270 68.9
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 3.2e-76 289.3 294 60.2
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 8.7e-74 281.2 185 77.3
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 8.1e-72 274.6 287 58.5
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.2e-67 260.8 175 79.4
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 2.1e-64 250.0 166 75.9
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 4.8e-64 248.8 191 71.7
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 8.1e-64 248.1 166 77.7
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 1.1e-63 247.7 177 75.1
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 1.8e-63 246.9 188 71.3
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 3.1e-63 246.1 169 76.9
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 3.1e-63 246.1 174 75.9
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 4.5e-62 242.3 179 72.1
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 7.6e-62 241.5 174 74.7
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 1.3e-61 240.7 177 73.4
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 1.7e-61 240.4 176 73.9
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 2.2e-61 240.0 173 74.0
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 4.9e-61 238.8 188 69.7
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 4.9e-61 238.8 188 69.7
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 6.4e-61 238.4 169 74.6
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 8.4e-61 238.0 170 75.3
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 1.9e-60 236.9 196 68.4
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 3.2e-60 236.1 188 70.7
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 3.2e-60 236.1 188 70.7
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 4.2e-60 235.7 185 69.2
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 7.1e-60 235.0 186 70.4
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.7e-59 233.0 177 70.6
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 3.5e-59 232.6 186 67.2
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 6.0e-59 231.9 177 70.6
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 7.9e-59 231.5 188 68.1
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 1.0e-58 231.1 182 69.2
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 1.3e-58 230.7 183 67.8
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.3e-58 230.7 188 67.6
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 3.0e-58 229.6 169 72.8
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 3.0e-58 229.6 182 69.8
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.0e-58 229.6 169 73.4
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.0e-58 229.6 174 71.3
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 5.1e-58 228.8 170 72.9
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 1.5e-57 227.3 169 72.8
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 1.9e-57 226.9 174 70.1
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 2.5e-57 226.5 180 68.3
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 4.3e-57 225.7 169 71.6
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 4.3e-57 225.7 185 67.0
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 7.4e-57 224.9 172 69.8
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 9.6e-57 224.6 185 67.6
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 9.6e-57 224.6 185 67.6
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 1.6e-56 223.8 172 69.2
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 1.6e-56 223.8 172 69.2
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 1.6e-56 223.8 172 69.2
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.6e-56 223.8 182 66.5
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 2.8e-56 223.0 164 73.8
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.8e-56 223.0 169 71.6
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 3.7e-56 222.6 194 66.5
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 4.8e-56 222.2 182 65.9
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 4.8e-56 222.2 188 67.6
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 1.1e-55 221.1 167 70.1
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 1.1e-55 221.1 169 71.6
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.4e-55 220.7 171 70.2
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 2.4e-55 219.9 174 70.1
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 2.4e-55 219.9 173 69.9
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 4.0e-55 219.2 171 71.3
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 6.9e-55 218.4 162 73.5
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 9.0e-55 218.0 158 75.3
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 3.4e-54 216.1 168 73.2
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 7.6e-54 214.9 165 69.7
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 1.0e-53 214.5 168 72.0
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 3.8e-53 212.6 225 56.4
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 4.9e-53 212.2 172 66.9
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 6.5e-53 211.8 165 67.9
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 1.4e-52 210.7 172 67.4
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 3.2e-52 209.5 169 67.5
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 3.2e-52 209.5 169 67.5
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 3.2e-52 209.5 151 75.5
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 3.2e-52 209.5 151 75.5
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 4.2e-52 209.1 162 70.4
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 9.3e-52 208.0 186 64.5
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 9.3e-52 208.0 176 63.6
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 1.2e-51 207.6 173 65.9
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 1.2e-51 207.6 211 59.7
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.6e-51 207.2 173 66.5
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 2.1e-51 206.8 169 67.5
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 6.0e-51 205.3 165 69.1
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.0e-50 204.5 178 64.6
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 8.7e-50 201.4 159 67.3
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 5.7e-49 198.7 210 57.6
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 1.5e-46 190.7 135 73.3
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 3.4e-46 189.5 165 64.2
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 1.0e-45 188.0 118 82.2
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 1.1e-44 184.5 164 61.6
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.4e-44 184.1 186 59.7
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 3.0e-42 176.4 165 61.2
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 3.9e-42 176.0 187 57.2
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.1e-41 174.5 135 71.1
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 2.2e-40 170.2 136 68.4
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 2.8e-40 169.9 177 55.9
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 3.7e-40 169.5 124 71.0
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 2.4e-39 166.8 144 65.3
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 1.3e-37 161.0 122 73.0
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 3.8e-37 159.5 119 73.1
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.6e-33 146.7 109 73.4
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 1.3e-32 144.4 123 65.9
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 2.2e-32 143.7 104 72.1
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 9.1e-31 138.3 105 71.4
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 1.5e-25 120.9 170 43.5
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 1.7e-24 117.5 168 42.3
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 2.0e-22 110.5 72 79.2
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 3.5e-22 109.8 116 56.0
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 2.2e-21 107.1 71 77.5
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 5.0e-21 105.9 64 85.9
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 8.8e-18 95.1 106 51.9
arahy.Tifrunner.gnm1.ann1.24L57E Arachis hypogaea HOM05D006300 ORTHO05D007623 2.5e-12 77.0 75 58.7
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 1.5e-09 67.8 65 55.4
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 4.8e-08 62.8 40 75.0
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.4e-07 61.2 47 68.1
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 1.8e-07 60.8 128 35.2
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 9.1e-07 58.5 61 54.1
arahy.Tifrunner.gnm1.ann1.GTSR33 Arachis hypogaea HOM05D006300 ORTHO05D007623 5.9e-06 55.8 50 58.0


User provided reference genes

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