Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G135700 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 1.1e-28 130.2 127 100.0
VMungo1080G0149 Vigna mungo HOM05D004188 ORTHO05D004445 4.3e-20 101.7 63 81.0
Glyma.12G172900 Glycine max HOM05D004188 ORTHO05D004445 2.6e-17 92.4 62 80.6
Psat5g278280 Pisum sativum HOM05D004188 ORTHO05D004445 3.3e-12 75.5 60 58.3
Ca_01416_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 5.7e-12 74.7 60 58.3
Medtr2g094170 Medicago truncatula HOM05D004188 ORTHO05D004445 3.7e-11 72.0 62 54.8
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 4.8e-11 71.6 59 61.0
TPR.G11601 Trifolium pratense HOM05D004188 ORTHO05D004445 6.3e-11 71.2 59 57.6
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 4.1e-10 68.6 61 62.3
Lj3g0014225 Lotus japonicus HOM05D004188 ORTHO05D004445 9.1e-10 67.4 59 59.3
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 1.2e-09 67.0 61 55.7
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 1.2e-09 67.0 61 55.7
CiPaw.13G112700 Carya illinoinensis HOM05D004188 ORTHO05D004445 4.5e-09 65.1 58 56.9
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 5.9e-09 64.7 56 51.8
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 5.9e-09 64.7 56 51.8
Lalb_Chr22g0350231 Lupinus albus HOM05D004188 ORTHO05D004445 5.9e-09 64.7 63 52.4
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 7.7e-09 64.3 59 55.9
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 1.3e-08 63.5 63 49.2
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 2.2e-08 62.8 59 50.8
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 2.9e-08 62.4 54 55.6
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 5.0e-08 61.6 50 62.0
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 5.0e-08 61.6 59 52.5
Lalb_Chr14g0374691 Lupinus albus HOM05D004188 ORTHO05D004445 6.5e-08 61.2 63 47.6
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 6.5e-08 61.2 62 48.4
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 8.5e-08 60.8 54 57.4
Medtr4g059520 Medicago truncatula HOM05D004188 ORTHO05D004445 1.1e-07 60.5 54 55.6
Medtr4g459420 Medicago truncatula HOM05D004188 ORTHO05D004445 1.1e-07 60.5 54 55.6
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 1.1e-07 60.5 55 52.7
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 1.4e-07 60.1 60 48.3
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 1.4e-07 60.1 59 49.2
Solyc06g016790.3 Solanum lycopersicum HOM05D004188 ORTHO05D004445 1.4e-07 60.1 59 52.5
Sopen06g005740 Solanum pennellii HOM05D004188 ORTHO05D004445 1.4e-07 60.1 59 52.5
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.9e-07 59.7 49 61.2
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 1.9e-07 59.7 59 50.8
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 2.5e-07 59.3 62 48.4
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 2.5e-07 59.3 51 56.9
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea HOM05D004188 ORTHO05D004445 3.2e-07 58.9 56 53.6
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea HOM05D004188 ORTHO05D004445 3.2e-07 58.9 56 53.6
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 3.2e-07 58.9 50 60.0
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 3.2e-07 58.9 54 55.6
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 4.2e-07 58.5 60 53.3
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 4.2e-07 58.5 57 47.4
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 4.2e-07 58.5 63 50.8
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 4.2e-07 58.5 61 47.5
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 4.2e-07 58.5 66 47.0
CAN.G920.1 Capsicum annuum HOM05D004188 ORTHO05D004445 5.5e-07 58.2 59 49.2
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 5.5e-07 58.2 64 45.3
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 5.5e-07 58.2 51 56.9
Oeu002868.1 Olea europaea HOM05D004188 ORTHO05D004445 5.5e-07 58.2 55 49.1
PGSC0003DMG400029164 Solanum tuberosum HOM05D004188 ORTHO05D004445 5.5e-07 58.2 59 50.8
CsaV3_1G012810 Cucumis sativus L. HOM05D004188 ORTHO05D004445 7.2e-07 57.8 60 45.0
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 7.2e-07 57.8 50 60.0
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 9.4e-07 57.4 51 56.9
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 9.4e-07 57.4 61 45.9
Lsat_1_v5_gn_6_46020 Lactuca sativa HOM05D004188 ORTHO05D004445 9.4e-07 57.4 61 44.3
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 1.2e-06 57.0 61 45.9
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla HOM05D004188 ORTHO05D004445 1.2e-06 57.0 53 52.8
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.2e-06 57.0 52 51.9
Sed0026517 Sechium edule HOM05D004188 ORTHO05D004445 1.2e-06 57.0 59 45.8
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.6e-06 56.6 63 50.8
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 2.1e-06 56.2 62 48.4
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 2.1e-06 56.2 54 53.7
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 2.1e-06 56.2 51 54.9
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.1e-06 56.2 61 44.3
Peaxi162Scf00092g00152 Petunia axillaris HOM05D004188 ORTHO05D004445 2.1e-06 56.2 61 45.9
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 2.7e-06 55.8 63 49.2
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 3.6e-06 55.5 59 49.2
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 3.6e-06 55.5 61 45.9
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 3.6e-06 55.5 51 52.9
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 3.6e-06 55.5 51 52.9
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 4.7e-06 55.1 61 49.2
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 4.7e-06 55.1 61 44.3
Sc06g0010170 Simmondsia chinensis HOM05D004188 ORTHO05D004445 6.1e-06 54.7 58 46.6
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 7.9e-06 54.3 53 52.8
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 7.9e-06 54.3 53 52.8
Rhsim13G0094200 Rhododendron simsii HOM05D004188 ORTHO05D004445 7.9e-06 54.3 53 49.1


User provided reference genes

Program Settings