Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 9.2e-150 533.5 263 100.0
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 6.6e-140 500.7 264 94.3
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 3.1e-121 438.7 263 85.2
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 5.1e-108 394.8 266 78.2
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 5.1e-108 394.8 265 77.4
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 1.1e-107 393.7 268 76.9
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 2.5e-107 392.5 266 77.1
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 2.5e-107 392.5 273 75.8
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 9.7e-107 390.6 272 75.7
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 1.3e-106 390.2 268 75.7
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.1e-99 367.1 265 72.5
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 2.2e-98 362.8 270 70.0
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 3.7e-98 362.1 265 72.1
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 3.1e-97 359.0 269 71.4
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 5.3e-97 358.2 271 70.5
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 1.2e-96 357.1 266 72.2
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 1.5e-96 356.7 269 72.1
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 1.7e-95 353.2 268 70.1
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 5.0e-95 351.7 268 69.4
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 1.4e-94 350.1 203 80.3
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 2.5e-94 349.4 268 71.3
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 7.2e-94 347.8 269 69.1
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 7.9e-93 344.4 271 68.3
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 7.9e-93 344.4 266 68.0
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 3.0e-92 342.4 286 65.4
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 6.7e-92 341.3 266 67.3
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 8.8e-92 340.9 278 68.0
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 2.6e-91 339.3 265 67.2
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 3.3e-91 339.0 261 67.8
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 4.4e-91 338.6 265 65.3
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 5.7e-91 338.2 254 70.1
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 9.7e-91 337.4 267 67.4
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 2.2e-90 336.3 204 79.4
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 3.7e-90 335.5 251 69.7
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 3.7e-90 335.5 277 64.6
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 6.3e-90 334.7 267 63.3
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 1.8e-89 333.2 261 65.9
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.8e-89 333.2 211 75.8
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.8e-89 333.2 211 75.8
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 1.8e-89 333.2 263 67.7
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 1.8e-89 333.2 268 65.7
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.1e-89 332.4 205 77.6
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.1e-89 332.4 205 77.6
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 2.0e-88 329.7 254 66.5
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 4.5e-88 328.6 254 65.7
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 5.9e-88 328.2 268 65.7
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 2.9e-87 325.9 260 67.3
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 2.9e-87 325.9 260 65.0
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 6.5e-87 324.7 266 66.5
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.1e-86 323.9 264 65.9
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.5e-86 322.8 255 66.7
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 5.5e-86 321.6 215 72.1
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 5.5e-86 321.6 264 65.2
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 7.2e-86 321.2 246 66.7
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 1.2e-85 320.5 261 64.0
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 2.7e-85 319.3 236 68.2
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 8.0e-85 317.8 246 65.9
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 8.0e-85 317.8 274 64.2
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 1.4e-84 317.0 261 67.0
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 2.3e-84 316.2 249 65.9
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 3.0e-84 315.8 272 64.0
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 8.8e-84 314.3 186 80.6
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.2e-83 313.9 263 64.6
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.2e-83 313.9 186 80.1
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 2.0e-83 313.2 271 64.2
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.7e-82 310.1 234 67.1
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 2.2e-82 309.7 176 83.5
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 2.8e-82 309.3 267 64.0
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 8.2e-82 307.8 267 63.7
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.1e-81 307.4 192 78.1
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 9.1e-81 304.3 271 63.5
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 3.8e-79 298.9 201 71.1
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 5.0e-79 298.5 267 59.2
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 8.5e-79 297.7 217 68.2
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.6e-77 293.5 225 66.7
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 4.7e-77 292.0 198 69.2
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 1.5e-75 287.0 343 51.9
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 2.6e-75 286.2 176 75.6
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 4.4e-75 285.4 203 70.9
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 4.8e-74 282.0 231 63.2
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 4.1e-73 278.9 258 60.9
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.2e-72 277.3 175 76.0
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 1.0e-71 274.2 214 64.0
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 1.9e-70 270.0 202 67.3
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 5.2e-68 261.9 156 76.9
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 2.0e-67 260.0 276 56.2
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 5.9e-64 248.4 204 58.8
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 7.8e-64 248.1 190 66.8
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 3.3e-62 242.7 250 54.4
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 2.0e-59 233.4 202 63.4
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.6e-59 233.0 193 60.1
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 3.2e-57 226.1 206 58.3
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 4.1e-57 225.7 159 66.0
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 9.2e-57 224.6 157 67.5
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 4.6e-56 222.2 159 64.2
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 3.9e-55 219.2 246 53.7
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 1.9e-54 216.9 160 65.6
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 1.2e-53 214.2 135 74.8
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 6.0e-48 195.3 172 61.6
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 6.0e-48 195.3 161 62.7
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 7.8e-48 194.9 133 70.7
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.1e-46 191.0 197 54.3
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 1.1e-44 184.5 109 82.6
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 4.0e-44 182.6 112 79.5
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 8.9e-44 181.4 196 53.6
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 7.5e-43 178.3 114 75.4
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 4.9e-42 175.6 159 57.9
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 8.3e-42 174.9 202 47.0
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 1.6e-40 170.6 121 71.1
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 3.0e-39 166.4 107 73.8
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 3.0e-39 166.4 107 73.8
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 1.9e-38 163.7 81 91.4
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.3e-38 162.9 107 75.7
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 8.1e-37 158.3 82 87.8
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.8e-34 149.4 94 78.7
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 4.6e-32 142.5 94 74.5
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 8.1e-29 131.7 131 58.8
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.8e-26 122.9 162 48.1
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 3.3e-22 109.8 109 56.9
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 1.5e-19 100.9 193 35.2


User provided reference genes

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