Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 9.7e-261 902.9 441 100.0
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 8.3e-220 766.9 437 84.9
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 7.8e-210 733.8 415 86.5
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 2.7e-194 682.2 440 76.6
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.7e-188 662.9 432 74.8
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 3.8e-188 661.8 452 74.1
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 4.6e-186 654.8 444 73.4
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.9e-184 649.4 439 74.0
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 3.2e-179 632.1 436 72.2
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 4.6e-178 628.2 433 72.3
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 1.8e-177 626.3 444 71.2
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 5.0e-148 528.5 432 60.4
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.0e-140 504.2 428 57.0
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 1.7e-140 503.4 428 57.2
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.5e-139 500.4 430 56.7
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 2.5e-139 499.6 417 58.3
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 7.2e-139 498.0 421 58.2
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.0e-137 492.7 431 57.3
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 4.0e-137 492.3 447 56.2
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 6.8e-137 491.5 423 58.6
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 8.8e-137 491.1 433 57.3
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.2e-136 490.7 430 57.0
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 9.7e-136 487.6 431 56.6
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 2.8e-135 486.1 411 57.7
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 6.3e-135 485.0 432 54.9
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 3.1e-134 482.6 434 56.2
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 4.1e-134 482.3 400 57.0
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 7.0e-134 481.5 417 56.4
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-133 479.9 439 56.0
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-132 476.5 423 56.7
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 2.9e-132 476.1 419 54.9
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.2e-131 472.6 423 54.6
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 1.2e-130 470.7 412 56.3
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.4e-129 467.2 420 55.2
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.2e-128 464.2 434 53.2
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 5.7e-128 461.8 409 56.7
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 9.8e-128 461.1 409 56.5
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 7.7e-125 451.4 412 51.9
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 6.6e-124 448.4 412 51.5
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 6.6e-124 448.4 418 54.1
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 8.6e-124 448.0 424 55.0
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.9e-123 446.8 480 50.0
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 5.5e-123 445.3 413 52.5
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 9.5e-123 444.5 412 51.5
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 9.5e-123 444.5 408 54.9
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 1.6e-122 443.7 422 51.7
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.1e-122 443.4 409 54.0
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 4.7e-122 442.2 413 50.8
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 8.0e-122 441.4 418 52.2
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.0e-120 436.8 417 51.3
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 5.7e-120 435.3 429 49.4
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 7.5e-120 434.9 449 51.2
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.3e-119 434.1 472 48.1
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.7e-119 433.7 416 52.9
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 1.3e-116 424.1 438 48.9
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 5.0e-116 422.2 432 49.8
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 6.6e-116 421.8 423 49.9
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 6.6e-116 421.8 418 48.3
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 8.6e-116 421.4 441 49.0
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 4.3e-115 419.1 429 49.4
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.7e-114 415.6 355 56.3
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 1.8e-113 413.7 453 46.8
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 5.2e-113 412.1 415 48.7
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 8.9e-113 411.4 422 51.7
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 2.0e-112 410.2 431 47.6
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.4e-112 409.5 314 61.1
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 4.4e-112 409.1 415 51.6
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 2.4e-110 403.3 460 47.4
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 3.3e-107 392.9 419 48.2
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 4.3e-107 392.5 311 61.7
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 9.5e-107 391.3 367 52.3
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 2.1e-106 390.2 381 53.5
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.1e-105 387.9 418 47.8
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 6.8e-105 385.2 529 40.1
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 6.4e-103 378.6 441 45.8
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 3.2e-102 376.3 419 43.4
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 9.2e-102 374.8 410 46.8
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 5.1e-100 369.0 311 57.6
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 2.6e-96 356.7 443 47.2
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 4.4e-96 355.9 404 44.1
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 9.9e-96 354.8 413 44.3
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 2.9e-95 353.2 409 46.9
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 6.4e-95 352.1 418 45.0
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 1.1e-91 341.3 356 51.1
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.3e-82 311.2 440 41.4
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.3e-82 311.2 312 48.7
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.0e-81 305.1 456 41.9
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 2.0e-80 303.9 456 41.7
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 1.2e-77 294.7 426 41.5
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.6e-77 294.3 252 56.3
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.6e-77 292.7 459 41.0
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.6e-76 288.9 453 41.1
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 1.6e-74 284.3 283 48.8
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.5e-72 277.7 417 40.3
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 5.8e-72 275.8 406 41.4
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 7.6e-72 275.4 406 41.4
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.3e-68 263.8 456 39.7
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.7e-68 261.9 207 59.9
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.2e-66 255.8 412 40.8
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 6.2e-66 255.8 297 45.5
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 4.5e-56 223.0 205 54.6
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 2.5e-54 217.2 241 46.5
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 2.3e-52 210.7 321 43.6
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 6.7e-52 209.1 232 48.7
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 3.3e-51 206.8 200 52.0
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 8.2e-50 202.2 404 29.0
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 1.3e-47 194.9 452 29.0
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 3.3e-43 180.3 224 45.1
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 6.9e-41 172.6 343 32.7
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.7e-39 167.9 162 53.1
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 2.9e-39 167.2 306 36.3
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.2e-38 163.7 151 53.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 1.6e-37 161.4 201 44.3
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 3.6e-37 160.2 336 32.4
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 4.7e-37 159.8 236 40.3
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.7e-37 159.8 236 40.3
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 3.0e-36 157.1 153 48.4
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 8.2e-34 149.1 374 28.9
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.7e-31 141.4 137 55.5
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 3.2e-30 137.1 140 45.0
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 4.8e-26 123.2 91 60.4
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 5.9e-24 116.3 294 25.2
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 1.9e-22 111.3 88 59.1
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 9.4e-22 109.0 138 42.0
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 6.8e-20 102.8 67 65.7
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 2.8e-18 97.4 117 47.0
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 2.4e-17 94.4 108 48.1
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.0e-12 77.4 105 40.0
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.4e-09 67.8 143 36.4
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.9e-08 63.2 63 44.4
Cre07.g347900 Chlamydomonas reinhardtii HOM05D006479 ORTHO05D140102 2.5e-06 57.8 150 27.3
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 2.5e-06 57.8 87 36.8


User provided reference genes

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