Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.1e-217 759.6 370 100.0
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 3.7e-205 718.0 370 93.5
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 3.7e-181 638.3 373 84.5
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 4.0e-167 591.7 370 78.9
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 9.6e-161 570.5 373 74.8
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 1.6e-155 553.1 376 72.9
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.2e-150 537.0 344 76.5
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 1.5e-150 536.6 370 71.6
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 2.5e-148 529.3 374 69.3
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 1.2e-147 526.9 376 69.7
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 2.5e-140 502.7 359 69.6
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 1.6e-136 490.0 305 76.7
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 2.8e-136 489.2 365 69.3
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 3.7e-136 488.8 282 81.6
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 3.7e-136 488.8 361 68.1
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.1e-135 487.3 320 71.9
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 3.9e-130 468.8 375 63.2
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 5.1e-130 468.4 367 64.9
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 1.1e-129 467.2 363 63.9
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.0e-129 466.5 336 67.3
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 5.7e-129 464.9 339 66.7
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 5.7e-129 464.9 339 68.4
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 9.7e-129 464.2 380 62.9
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 1.3e-128 463.8 361 64.5
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 1.3e-128 463.8 378 64.6
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 2.2e-128 463.0 355 66.2
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 2.8e-128 462.6 388 61.3
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 4.8e-128 461.8 365 65.5
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.4e-127 460.3 343 65.6
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 1.4e-127 460.3 386 62.7
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 1.8e-127 459.9 359 64.6
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 3.1e-127 459.1 386 62.4
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 6.9e-127 458.0 359 64.6
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 3.4e-126 455.7 374 62.3
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.7e-125 453.4 344 65.1
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.7e-125 453.4 365 62.7
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.2e-125 453.0 386 62.7
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 2.2e-125 453.0 363 62.8
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 6.5e-125 451.4 337 65.6
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 6.5e-125 451.4 372 61.0
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 1.1e-124 450.7 344 62.8
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 1.1e-124 450.7 327 64.5
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 1.9e-124 449.9 353 62.6
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 1.9e-124 449.9 365 63.8
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 3.2e-124 449.1 366 64.2
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 9.4e-124 447.6 367 62.1
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 1.2e-123 447.2 326 63.8
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.6e-123 446.8 370 61.1
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 2.7e-123 446.0 357 62.2
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 7.9e-123 444.5 353 62.6
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.3e-122 443.0 373 62.5
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 2.3e-122 443.0 366 61.2
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.9e-122 442.2 375 60.3
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 6.7e-122 441.4 357 62.2
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.1e-121 440.7 370 60.3
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.5e-121 440.3 397 58.7
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 4.4e-121 438.7 397 59.7
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 7.4e-121 438.0 331 63.7
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 7.4e-121 438.0 358 60.9
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 9.7e-121 437.6 357 61.6
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.7e-120 436.8 340 63.2
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 2.8e-120 436.0 320 66.9
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 4.8e-120 435.3 369 61.5
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 6.3e-120 434.9 340 62.6
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 6.3e-120 434.9 332 64.2
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.4e-119 433.7 329 63.2
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 2.4e-119 433.0 353 62.9
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 2.4e-119 433.0 329 63.8
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.1e-119 432.6 370 61.1
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.1e-119 432.6 370 61.1
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 7.0e-119 431.4 362 59.9
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 9.1e-119 431.0 329 63.8
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 4.5e-118 428.7 329 62.6
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 1.3e-117 427.2 365 59.7
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.1e-116 424.1 341 61.6
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.9e-116 423.3 344 61.6
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.9e-116 423.3 368 56.8
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 2.5e-116 422.9 366 60.4
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.2e-116 422.5 340 61.8
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 5.5e-116 421.8 332 61.4
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 2.1e-115 419.9 333 63.1
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 4.7e-115 418.7 361 60.7
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.8e-114 416.8 345 60.9
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 3.9e-114 415.6 331 62.8
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 1.1e-113 414.1 327 61.8
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 2.0e-113 413.3 283 67.8
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 2.6e-113 412.9 363 60.1
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 3.3e-113 412.5 378 59.0
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 3.3e-113 412.5 335 63.6
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 4.4e-113 412.1 359 59.6
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 6.3e-112 408.3 370 57.8
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 8.2e-112 407.9 280 70.0
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 1.4e-111 407.1 383 57.4
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 4.1e-111 405.6 330 63.0
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 7.7e-110 401.4 351 58.4
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 2.5e-108 396.4 372 56.7
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 2.5e-108 396.4 270 70.4
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 3.2e-108 396.0 362 58.8
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 7.2e-108 394.8 372 56.7
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.0e-106 389.0 399 53.1
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 2.7e-102 376.3 325 60.6
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.1e-100 370.9 366 53.0
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 3.0e-98 362.8 303 61.7
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 2.8e-96 356.3 303 55.8
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 1.3e-93 347.4 366 52.7
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 3.6e-91 339.3 359 50.7
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 9.8e-89 331.3 329 52.6
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 1.3e-85 320.9 294 53.7
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.5e-84 316.6 335 53.1
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 2.8e-83 313.2 352 49.1
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 1.3e-80 304.3 300 52.0
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 5.0e-77 292.4 246 60.6
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 5.8e-73 278.9 214 61.7
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 3.2e-71 273.1 225 61.8
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.5e-68 264.2 296 45.3
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.0e-65 253.8 289 42.6
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 3.5e-62 243.0 295 44.1
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 6.0e-62 242.3 271 49.8
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 3.5e-54 216.5 230 48.7
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 6.0e-46 189.1 129 69.0
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 1.9e-36 157.5 148 52.7
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 7.1e-31 139.0 90 70.0
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 3.9e-29 133.3 85 72.9
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 4.3e-28 129.8 196 37.8
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.6e-25 120.6 69 72.5
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.8e-11 73.9 70 54.3
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 3.4e-09 67.0 102 41.2
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 3.8e-08 63.5 42 64.3
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.6e-06 58.2 35 71.4


User provided reference genes

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